Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 8.6e-205 716.8 384 100.0
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 7.0e-106 388.3 332 60.5
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 1.7e-104 383.6 316 62.7
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 3.8e-104 382.5 322 60.2
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 1.5e-103 380.6 308 63.3
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.9e-103 380.2 320 59.7
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 2.5e-103 379.8 319 62.1
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 5.6e-103 378.6 306 64.1
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 7.3e-103 378.3 306 64.1
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 9.5e-103 377.9 309 62.5
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.2e-102 377.5 308 62.3
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 1.2e-102 377.5 325 60.6
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 1.2e-102 377.5 308 62.3
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 1.2e-102 377.5 330 60.0
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 1.2e-102 377.5 324 60.2
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 1.2e-102 377.5 324 60.2
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 2.1e-102 376.7 325 61.5
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 2.8e-102 376.3 305 63.9
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 2.8e-102 376.3 324 60.2
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 2.8e-102 376.3 335 59.7
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 3.6e-102 375.9 320 62.2
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 3.6e-102 375.9 314 61.8
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 4.7e-102 375.6 332 59.6
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 4.7e-102 375.6 308 62.0
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 4.7e-102 375.6 333 60.1
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 6.1e-102 375.2 305 64.3
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 1.0e-101 374.4 307 63.5
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 1.0e-101 374.4 305 64.6
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 1.0e-101 374.4 330 60.3
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 1.4e-101 374.0 322 59.6
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 1.8e-101 373.6 305 63.0
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 2.3e-101 373.2 322 59.9
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 2.3e-101 373.2 314 62.1
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 8.9e-101 371.3 304 63.2
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 1.2e-100 370.9 314 60.8
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 1.2e-100 370.9 320 61.9
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 1.2e-100 370.9 318 60.4
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 1.5e-100 370.5 323 60.1
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 2.6e-100 369.8 308 62.3
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 3.4e-100 369.4 320 60.6
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 3.4e-100 369.4 305 62.6
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 4.4e-100 369.0 305 62.6
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 4.4e-100 369.0 305 62.6
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 5.7e-100 368.6 305 61.6
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 7.5e-100 368.2 305 62.0
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 9.8e-100 367.9 313 60.7
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 9.8e-100 367.9 305 62.3
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 1.7e-99 367.1 315 60.6
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 1.7e-99 367.1 329 57.8
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.7e-99 367.1 312 61.9
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 1.7e-99 367.1 308 61.4
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 3.7e-99 365.9 326 58.6
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 3.7e-99 365.9 314 61.1
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 4.9e-99 365.5 305 61.0
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 4.9e-99 365.5 312 61.5
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 6.4e-99 365.2 308 61.4
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 1.1e-98 364.4 320 60.9
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 1.1e-98 364.4 306 60.8
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 1.4e-98 364.0 333 59.8
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 2.4e-98 363.2 326 58.6
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 3.2e-98 362.8 305 63.0
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 4.1e-98 362.5 305 63.0
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 5.4e-98 362.1 312 61.2
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 1.2e-97 360.9 308 60.7
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 1.6e-97 360.5 326 58.3
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 1.6e-97 360.5 316 60.1
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 2.0e-97 360.1 319 61.1
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 4.6e-97 359.0 309 62.1
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 5.9e-97 358.6 308 61.7
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 5.9e-97 358.6 308 60.7
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 5.9e-97 358.6 308 60.7
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 5.9e-97 358.6 264 67.4
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 7.8e-97 358.2 315 59.4
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 2.3e-96 356.7 308 60.4
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.3e-96 356.7 320 60.3
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 3.0e-96 356.3 279 64.2
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 3.9e-96 355.9 307 60.3
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 3.9e-96 355.9 308 60.1
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 8.6e-96 354.8 306 60.8
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 4.3e-95 352.4 358 55.0
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 4.3e-95 352.4 302 59.3
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 1.6e-94 350.5 307 59.0
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 2.3e-93 346.7 267 65.2
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 6.8e-93 345.1 305 59.0
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 4.4e-92 342.4 315 57.8
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 5.4e-90 335.5 352 52.8
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 2.7e-89 333.2 308 58.8
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 5.0e-88 328.9 316 56.3
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 4.7e-86 322.4 401 46.6
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 2.7e-81 306.6 457 41.8
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 2.0e-76 290.4 210 69.0
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 2.3e-72 276.9 430 41.4
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 1.9e-71 273.9 236 60.2
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.5e-68 264.2 219 63.9
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 9.3e-66 255.0 202 64.9
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.1e-63 248.1 308 46.8
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.3e-59 234.6 213 56.8
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 1.7e-59 234.2 213 56.8
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 3.2e-58 229.9 166 68.7
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.7e-57 226.9 199 61.8
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.3e-56 223.8 248 45.2
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.1e-54 217.2 191 61.8
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 4.8e-54 216.1 191 61.3
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 6.2e-54 215.7 168 66.1
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 3.4e-52 209.9 315 41.0
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.3e-51 208.0 197 58.4
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 1.3e-51 208.0 173 62.4
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.1e-47 194.9 150 64.0
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 2.4e-45 187.2 193 52.8
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 5.3e-45 186.0 153 62.1
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.5e-44 184.5 256 40.6
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.0e-40 171.8 183 53.0
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 7.6e-36 155.6 144 56.9
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 5.0e-35 152.9 112 67.9
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 1.2e-25 121.7 240 33.8
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 6.1e-25 119.4 104 58.7
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 2.8e-22 110.5 112 48.2
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 5.0e-19 99.8 102 50.0
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 1.2e-17 95.1 76 64.5
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 3.9e-16 90.1 238 30.3
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 1.6e-09 68.2 47 59.6
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 5.7e-07 59.7 51 58.8


User provided reference genes

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