Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre13.g571000 Chlamydomonas reinhardtii HOM05D006084 ORTHO05D007449 2.0e-68 262.3 133 100.0
CANSAT64G0964 Cannabis sativa HOM05D006084 ORTHO05D007449 1.2e-20 103.6 121 44.6
THA.LOC104821076 Tarenaya hassleriana HOM05D006084 ORTHO05D007449 3.5e-20 102.1 117 43.6
HPP92_022049 Vanilla planifolia HOM05D006084 ORTHO05D007449 4.5e-20 101.7 129 37.2
Lalb_Chr10g0093921 Lupinus albus HOM05D006084 ORTHO05D007449 2.9e-19 99.0 129 40.3
Phvul.009G127800 Phaseolus vulgaris HOM05D006084 ORTHO05D007449 3.8e-19 98.6 117 41.9
Glyma.06G115700 Glycine max HOM05D006084 ORTHO05D007449 6.6e-19 97.8 117 41.0
A02p02680 Brassica napus HOM05D006084 ORTHO05D007449 8.6e-19 97.4 117 41.9
BraA02t05237Z Brassica rapa HOM05D006084 ORTHO05D007449 8.6e-19 97.4 117 41.9
Cc07_g02120 Coffea canephora HOM05D006084 ORTHO05D007449 8.6e-19 97.4 121 41.3
Glyma.04G247000 Glycine max HOM05D006084 ORTHO05D007449 1.5e-18 96.7 117 41.0
arahy.Tifrunner.gnm1.ann1.2LS7ZQ Arachis hypogaea HOM05D006084 ORTHO05D007449 1.9e-18 96.3 119 42.0
Actinidia35746 Actinidia chinensis HOM05D006084 ORTHO05D007449 2.5e-18 95.9 121 38.8
ECA238G3069 Erigeron canadensis HOM05D006084 ORTHO05D007449 2.5e-18 95.9 121 39.7
Mapoly0005s0179 Marchantia polymorpha HOM05D006084 ORTHO05D007449 3.3e-18 95.5 117 36.8
Rhsim08G0053800 Rhododendron simsii HOM05D006084 ORTHO05D007449 3.3e-18 95.5 123 39.8
Atru.chr6.2220 Acer truncatum HOM05D006084 ORTHO05D007449 4.2e-18 95.1 117 42.7
arahy.Tifrunner.gnm1.ann1.DMWP0X Arachis hypogaea HOM05D006084 ORTHO05D007449 4.2e-18 95.1 119 42.0
Hund02345 Selenicereus undatus HOM05D006084 ORTHO05D007449 4.2e-18 95.1 121 39.7
Haze_14684 Corylus avellana HOM05D006084 ORTHO05D007449 5.5e-18 94.7 121 39.7
Oeu004718.1 Olea europaea HOM05D006084 ORTHO05D007449 5.5e-18 94.7 117 41.9
PSO210G7688 Papaver somniferum HOM05D006084 ORTHO05D007449 5.5e-18 94.7 122 36.1
PSO782G1469 Papaver somniferum HOM05D006084 ORTHO05D007449 5.5e-18 94.7 122 37.7
BcaC03g13452 Brassica carinata HOM05D006084 ORTHO05D007449 7.2e-18 94.4 117 41.0
BcaNung03101 Brassica carinata HOM05D006084 ORTHO05D007449 7.2e-18 94.4 117 40.2
C02p07250 Brassica napus HOM05D006084 ORTHO05D007449 7.2e-18 94.4 117 41.0
BolC2t06657H Brassica oleracea HOM05D006084 ORTHO05D007449 7.2e-18 94.4 117 41.0
HanXRQChr07g0198791 Helianthus annuus HOM05D006084 ORTHO05D007449 9.5e-18 94.0 129 38.8
Sc03g0007970 Simmondsia chinensis HOM05D006084 ORTHO05D007449 9.5e-18 94.0 118 42.4
arahy.Tifrunner.gnm1.ann1.48HX9C Arachis hypogaea HOM05D006084 ORTHO05D007449 1.2e-17 93.6 119 41.2
FvH4_6g50830 Fragaria vesca HOM05D006084 ORTHO05D007449 1.2e-17 93.6 117 40.2
FAN02G2714 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.2e-17 93.6 117 40.2
MD17G1033600 Malus domestica HOM05D006084 ORTHO05D007449 1.2e-17 93.6 117 40.2
AL6G25480 Arabidopsis lyrata HOM05D006084 ORTHO05D007449 1.6e-17 93.2 117 40.2
AT5G14710 Arabidopsis thaliana HOM05D006084 ORTHO05D007449 1.6e-17 93.2 117 40.2
A03p06720 Brassica napus HOM05D006084 ORTHO05D007449 1.6e-17 93.2 117 40.2
Carub.0006s1288 Capsella rubella HOM05D006084 ORTHO05D007449 1.6e-17 93.2 117 39.3
Ca_16579_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 1.6e-17 93.2 119 39.5
Gohir.D07G227900 Gossypium hirsutum HOM05D006084 ORTHO05D007449 1.6e-17 93.2 117 40.2
TPR.G13476 Trifolium pratense HOM05D006084 ORTHO05D007449 1.6e-17 93.2 119 40.3
Thhalv10015025m.g Eutrema salsugineum HOM05D006084 ORTHO05D007449 2.1e-17 92.8 117 39.3
Lj1g0023236 Lotus japonicus HOM05D006084 ORTHO05D007449 2.1e-17 92.8 117 39.3
PSO566G0352 Papaver somniferum HOM05D006084 ORTHO05D007449 2.1e-17 92.8 122 37.7
Dinv33481 Davidia involucrata HOM05D006084 ORTHO05D007449 2.8e-17 92.4 126 39.7
FAN14G2625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.8e-17 92.4 117 40.2
Potri.001G349500 Populus trichocarpa HOM05D006084 ORTHO05D007449 2.8e-17 92.4 117 39.3
PGR142G2538 Punica granatum HOM05D006084 ORTHO05D007449 2.8e-17 92.4 109 40.4
Thecc.04G011100 Theobroma cacao HOM05D006084 ORTHO05D007449 2.8e-17 92.4 119 39.5
Gohir.A07G221200 Gossypium hirsutum HOM05D006084 ORTHO05D007449 3.6e-17 92.0 117 40.2
HanXRQChr14g0450361 Helianthus annuus HOM05D006084 ORTHO05D007449 3.6e-17 92.0 117 40.2
Sp6g29330 Schrenkiella parvula HOM05D006084 ORTHO05D007449 3.6e-17 92.0 117 40.2
RcHm_v2.0_Chr2g0172221 Rosa chinensis HOM05D006084 ORTHO05D007449 4.7e-17 91.7 117 40.2
Migut.H00108 Erythranthe guttata HOM05D006084 ORTHO05D007449 6.1e-17 91.3 117 40.2
Medtr3g088470 Medicago truncatula HOM05D006084 ORTHO05D007449 6.1e-17 91.3 131 37.4
Zm00001eb048120 Zea mays HOM05D006084 ORTHO05D007449 6.1e-17 91.3 124 34.7
BraA03t10005Z Brassica rapa HOM05D006084 ORTHO05D007449 1.0e-16 90.5 117 39.3
Hma1.2p1_0846F.1_g227700 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 1.0e-16 90.5 121 39.7
CSS0000489 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 1.4e-16 90.1 117 39.3
CSS0035017 Camellia sinensis var. sinensis HOM05D006084 ORTHO05D007449 1.4e-16 90.1 117 39.3
Cfa007418 Carpinus fangiana HOM05D006084 ORTHO05D007449 1.4e-16 90.1 121 38.0
Sed0018290 Sechium edule HOM05D006084 ORTHO05D007449 1.8e-16 89.7 117 38.5
TWI12G0619 Tripterygium wilfordii HOM05D006084 ORTHO05D007449 1.8e-16 89.7 119 41.2
MSTRG.3166 Avicennia marina HOM05D006084 ORTHO05D007449 2.3e-16 89.4 117 38.5
FAN05G5625 Fragaria x ananassa HOM05D006084 ORTHO05D007449 2.3e-16 89.4 116 39.7
Sopen02g031550 Solanum pennellii HOM05D006084 ORTHO05D007449 2.3e-16 89.4 116 37.9
ATR0730G058 Amborella trichopoda HOM05D006084 ORTHO05D007449 3.0e-16 89.0 117 37.6
BcaB01g05101 Brassica carinata HOM05D006084 ORTHO05D007449 3.0e-16 89.0 117 38.5
C03p07740 Brassica napus HOM05D006084 ORTHO05D007449 3.0e-16 89.0 117 38.5
BolC3t13274H Brassica oleracea HOM05D006084 ORTHO05D007449 3.0e-16 89.0 117 38.5
CARHR198600 Cardamine hirsuta HOM05D006084 ORTHO05D007449 3.0e-16 89.0 117 38.5
Os10g0395500 Oryza sativa ssp. japonica HOM05D006084 ORTHO05D007449 3.0e-16 89.0 117 35.9
MELO3C005689.2 Cucumis melo HOM05D006084 ORTHO05D007449 4.0e-16 88.6 117 36.8
Manes.17G116000 Manihot esculenta HOM05D006084 ORTHO05D007449 4.0e-16 88.6 117 38.5
Aa31LG11G14750 Aethionema arabicum HOM05D006084 ORTHO05D007449 5.2e-16 88.2 117 39.3
CAN.G206.22 Capsicum annuum HOM05D006084 ORTHO05D007449 5.2e-16 88.2 117 38.5
CDE08G0643 Ceratophyllum demersum HOM05D006084 ORTHO05D007449 5.2e-16 88.2 121 37.2
CsaV3_5G027340 Cucumis sativus L. HOM05D006084 ORTHO05D007449 8.9e-16 87.4 117 36.8
Prupe.3G286100 Prunus persica HOM05D006084 ORTHO05D007449 8.9e-16 87.4 117 38.5
QL02p076043 Quercus lobata HOM05D006084 ORTHO05D007449 1.2e-15 87.0 121 37.2
QL02p076078 Quercus lobata HOM05D006084 ORTHO05D007449 1.2e-15 87.0 121 37.2
ATR1096G027 Amborella trichopoda HOM05D006084 ORTHO05D007449 1.5e-15 86.7 117 36.8
Aqoxy3G02941 Aquilegia oxysepala HOM05D006084 ORTHO05D007449 1.5e-15 86.7 117 36.8
Pp3c26_1260 Physcomitrium patens HOM05D006084 ORTHO05D007449 1.5e-15 86.7 130 33.1
PGSC0003DMG400000490 Solanum tuberosum HOM05D006084 ORTHO05D007449 1.5e-15 86.7 116 37.9
TAR371G1194 Trochodendron aralioides HOM05D006084 ORTHO05D007449 1.5e-15 86.7 121 36.4
CiPaw.03G039200 Carya illinoinensis HOM05D006084 ORTHO05D007449 2.6e-15 85.9 121 35.5
CBR_g5628 Chara braunii HOM05D006084 ORTHO05D007449 2.6e-15 85.9 120 35.0
Eucgr.I01785 Eucalyptus grandis HOM05D006084 ORTHO05D007449 3.4e-15 85.5 117 37.6
BcaC04g19017 Brassica carinata HOM05D006084 ORTHO05D007449 5.7e-15 84.7 111 40.5
unitig_746.g26552 Utricularia gibba HOM05D006084 ORTHO05D007449 5.7e-15 84.7 113 36.3
FAN09G3162 Fragaria x ananassa HOM05D006084 ORTHO05D007449 1.3e-14 83.6 104 40.4
GSVIVG01032459001 Vitis vinifera HOM05D006084 ORTHO05D007449 1.7e-14 83.2 117 38.5
SGA_v2.0_scaffold2848G54225 Striga asiatica HOM05D006084 ORTHO05D007449 2.2e-14 82.8 113 39.8
Gorai.001G262800 Gossypium raimondii HOM05D006084 ORTHO05D007449 2.8e-14 82.4 103 40.8
Hma1.2p1_0056F.1_g031653 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 2.8e-14 82.4 94 42.6
Hma1.2p1_1415F.1_g281960 Hydrangea macrophylla HOM05D006084 ORTHO05D007449 2.8e-14 82.4 94 42.6
COL.COLO4_28991 Corchorus olitorius HOM05D006084 ORTHO05D007449 4.9e-14 81.6 134 34.3
Peaxi162Scf00129g01228 Petunia axillaris HOM05D006084 ORTHO05D007449 4.9e-14 81.6 104 37.5
SMO367G0706 Selaginella moellendorffii HOM05D006084 ORTHO05D007449 1.4e-13 80.1 100 36.0
EL10Ac3g07214 Beta vulgaris HOM05D006084 ORTHO05D007449 2.4e-13 79.3 111 36.9
arahy.Tifrunner.gnm1.ann1.GQ5XJ3 Arachis hypogaea HOM05D006084 ORTHO05D007449 9.2e-13 77.4 136 35.3
AUR62031990 Chenopodium quinoa HOM05D006084 ORTHO05D007449 9.2e-13 77.4 121 36.4
ClCG09G019010 Citrullus lanatus HOM05D006084 ORTHO05D007449 1.2e-12 77.0 139 31.7
C09p62430 Brassica napus HOM05D006084 ORTHO05D007449 2.0e-12 76.3 103 38.8
Cpa.g.c30698.2 Carica papaya HOM05D006084 ORTHO05D007449 1.0e-11 73.9 85 41.2
Nn3g16859 Nelumbo nucifera HOM05D006084 ORTHO05D007449 1.0e-11 73.9 88 38.6
BolC9t59081H Brassica oleracea HOM05D006084 ORTHO05D007449 1.7e-11 73.2 103 37.9
ClCG00G003490 Citrullus lanatus HOM05D006084 ORTHO05D007449 2.3e-11 72.8 138 31.2
SHI16396 Sapria himalayana HOM05D006084 ORTHO05D007449 2.3e-11 72.8 91 37.4
MBI19_g17406_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 2.9e-11 72.4 128 32.8
MBI19_g07248_MAGBIO Magnolia biondii HOM05D006084 ORTHO05D007449 9.5e-10 67.4 130 32.3
Duzib264G1216 Durio zibethinus HOM05D006084 ORTHO05D007449 3.6e-09 65.5 81 40.7
AagrBONN_evm.TU.Sc2ySwM_228.3157 Anthoceros agrestis HOM05D006084 ORTHO05D007449 4.7e-09 65.1 85 36.5
Solyc02g086780.4 Solanum lycopersicum HOM05D006084 ORTHO05D007449 4.7e-09 65.1 80 38.8
DCAR_011237 Daucus carota HOM05D006084 ORTHO05D007449 8.0e-09 64.3 71 45.1
Lsat_1_v5_gn_2_91880 Lactuca sativa HOM05D006084 ORTHO05D007449 1.4e-08 63.5 63 47.6
Ciclev10017692m.g Citrus clementina HOM05D006084 ORTHO05D007449 8.9e-08 60.8 68 45.6
Sabra16G0228900 Salix brachista HOM05D006084 ORTHO05D007449 2.6e-07 59.3 73 35.6
AUR62030334 Chenopodium quinoa HOM05D006084 ORTHO05D007449 3.4e-07 58.9 105 33.3
Nitab4.5_0007141g0020 Nicotiana tabacum HOM05D006084 ORTHO05D007449 5.8e-07 58.2 107 34.6
Ca_03224_v3 Cicer arietinum L. HOM05D006084 ORTHO05D007449 1.7e-06 56.6 72 40.3
Nitab4.5_0006281g0070 Nicotiana tabacum HOM05D006084 ORTHO05D007449 1.7e-06 56.6 63 41.3
MCO07G269 Micromonas commoda HOM05D006084 ORTHO05D007449 3.7e-06 55.5 90 32.2


User provided reference genes

Program Settings