Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 2.7e-139 498.8 278 100.0
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 2.7e-75 286.2 278 57.2
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 1.0e-74 284.3 278 59.0
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 5.1e-74 282.0 278 57.2
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 6.7e-74 281.6 278 58.3
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 1.1e-73 280.8 278 56.1
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 1.1e-73 280.8 278 56.1
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 1.5e-73 280.4 278 55.4
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 2.5e-73 279.6 278 56.1
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 2.5e-73 279.6 278 55.0
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 3.3e-73 279.3 276 56.2
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 3.3e-73 279.3 278 55.4
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 4.3e-73 278.9 278 55.8
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 5.7e-73 278.5 278 56.1
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 7.4e-73 278.1 278 56.5
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 7.4e-73 278.1 278 56.1
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 7.4e-73 278.1 277 56.3
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 9.7e-73 277.7 278 54.3
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 9.7e-73 277.7 278 56.5
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 9.7e-73 277.7 282 55.7
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 9.7e-73 277.7 278 56.1
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 1.3e-72 277.3 278 55.4
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 1.3e-72 277.3 278 55.8
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 1.3e-72 277.3 278 55.4
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 1.6e-72 276.9 278 54.3
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 2.2e-72 276.6 278 55.4
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 2.8e-72 276.2 278 55.8
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 2.8e-72 276.2 278 55.0
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 2.8e-72 276.2 280 55.0
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 2.8e-72 276.2 278 56.1
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 3.7e-72 275.8 275 55.6
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 4.8e-72 275.4 278 55.8
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 4.8e-72 275.4 278 54.7
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 6.3e-72 275.0 280 55.0
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 6.3e-72 275.0 278 55.8
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 8.2e-72 274.6 278 56.1
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 8.2e-72 274.6 279 55.9
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 8.2e-72 274.6 278 55.8
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 1.1e-71 274.2 278 56.8
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.1e-71 274.2 278 55.8
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 1.1e-71 274.2 278 55.8
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.4e-71 273.9 278 56.1
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 1.4e-71 273.9 278 54.7
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 1.4e-71 273.9 280 54.3
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 1.8e-71 273.5 278 54.0
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 1.8e-71 273.5 278 55.0
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 2.4e-71 273.1 278 56.5
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 2.4e-71 273.1 280 54.3
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 3.1e-71 272.7 278 55.0
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 3.1e-71 272.7 278 56.1
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 3.1e-71 272.7 278 55.4
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 4.1e-71 272.3 276 55.1
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 5.3e-71 271.9 278 55.4
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 5.3e-71 271.9 278 54.3
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 6.9e-71 271.6 278 54.7
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 9.0e-71 271.2 275 55.3
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 1.2e-70 270.8 275 56.4
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 1.2e-70 270.8 278 54.3
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 1.2e-70 270.8 280 54.3
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 1.2e-70 270.8 278 55.0
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 1.5e-70 270.4 278 54.0
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 2.0e-70 270.0 278 54.7
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 2.0e-70 270.0 278 54.0
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 2.0e-70 270.0 278 54.0
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 2.0e-70 270.0 278 56.1
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 3.4e-70 269.2 282 53.9
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 4.5e-70 268.9 278 54.0
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 4.5e-70 268.9 280 54.3
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 5.9e-70 268.5 278 54.7
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 5.9e-70 268.5 278 53.6
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 1.0e-69 267.7 278 53.6
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 1.3e-69 267.3 276 53.3
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 1.3e-69 267.3 278 56.5
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 1.7e-69 266.9 278 53.2
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 1.7e-69 266.9 278 55.0
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 1.7e-69 266.9 278 54.0
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 2.2e-69 266.5 278 52.9
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 2.2e-69 266.5 278 54.7
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 2.9e-69 266.2 278 54.3
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 5.0e-69 265.4 274 53.3
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 8.5e-69 264.6 278 53.2
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 1.1e-68 264.2 278 52.9
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 1.4e-68 263.8 278 52.9
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 1.9e-68 263.5 278 52.5
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 2.5e-68 263.1 285 53.3
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 2.5e-68 263.1 282 54.3
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 2.5e-68 263.1 309 51.1
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 3.2e-68 262.7 278 52.5
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 4.2e-68 262.3 282 53.9
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 1.6e-67 260.4 278 52.9
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 1.4e-66 257.3 279 55.2
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.8e-66 256.9 278 52.5
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 5.1e-66 255.4 278 51.4
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 6.7e-66 255.0 309 49.5
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 3.3e-65 252.7 278 53.6
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 4.8e-64 248.8 307 48.5
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 8.2e-64 248.1 293 49.8
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 1.3e-61 240.7 256 53.9
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 8.5e-61 238.0 246 55.3
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 2.3e-58 229.9 214 58.9
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 2.0e-57 226.9 281 49.1
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 2.0e-57 226.9 278 51.1
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 5.7e-57 225.3 298 47.3
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 8.2e-56 221.5 255 51.8
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 1.1e-55 221.1 200 62.0
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 2.4e-55 219.9 200 62.0
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 5.3e-55 218.8 278 47.8
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 3.5e-54 216.1 199 59.8
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 5.2e-50 202.2 278 46.4
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 6.7e-50 201.8 300 44.3
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 9.7e-49 198.0 276 42.8
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 1.8e-47 193.7 216 51.9
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 1.7e-45 187.2 168 59.5
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 1.1e-44 184.5 181 56.4
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 3.6e-27 126.3 89 71.9
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 5.2e-26 122.5 126 54.8
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 5.9e-22 109.0 119 52.9
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 4.3e-20 102.8 114 50.0
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 1.3e-13 81.3 102 47.1
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 1.7e-08 64.3 34 79.4
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 3.2e-07 60.1 49 57.1
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 1.6e-06 57.8 143 34.3


User provided reference genes

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