Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre12.g553650 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D143570 0.0e+00 1681.0 1218 100.0
Cre12.g553700 Chlamydomonas reinhardtii HOM05D004605 ORTHO05D005804 3.0e-25 122.1 172 37.8
Lsat_1_v5_gn_2_90241 Lactuca sativa HOM05D004605 ORTHO05D005804 1.6e-15 89.7 180 30.0
Phvul.008G027000 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 2.1e-15 89.4 178 33.1
HPP92_012260 Vanilla planifolia HOM05D004605 ORTHO05D005804 2.1e-15 89.4 182 30.8
Os03g0598900 Oryza sativa ssp. japonica HOM05D004605 ORTHO05D005804 3.6e-15 88.6 180 30.6
Phvul.008G026800 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 6.2e-15 87.8 178 32.6
Carub.0007s3694 Capsella rubella HOM05D004605 ORTHO05D005804 1.1e-14 87.0 180 30.0
Glyma.18G273900 Glycine max HOM05D004605 ORTHO05D005804 2.4e-14 85.9 178 32.0
Mapoly0001s0057 Marchantia polymorpha HOM05D004605 ORTHO05D005804 2.4e-14 85.9 179 29.6
VMungo1383G2960 Vigna mungo HOM05D004605 ORTHO05D005804 2.4e-14 85.9 178 32.0
Zm00001eb049940 Zea mays HOM05D004605 ORTHO05D005804 2.4e-14 85.9 180 30.6
Lj1g0025970 Lotus japonicus HOM05D004605 ORTHO05D005804 4.0e-14 85.1 178 32.6
Peaxi162Scf00020g10235 Petunia axillaris HOM05D004605 ORTHO05D005804 5.3e-14 84.7 180 29.4
ATR0827G055 Amborella trichopoda HOM05D004605 ORTHO05D005804 6.9e-14 84.3 181 29.3
AT5G38900 Arabidopsis thaliana HOM05D004605 ORTHO05D005804 6.9e-14 84.3 180 30.0
PGSC0003DMG400001379 Solanum tuberosum HOM05D004605 ORTHO05D005804 6.9e-14 84.3 180 30.0
Glyma.08G251200 Glycine max HOM05D004605 ORTHO05D005804 9.0e-14 84.0 178 31.5
Solyc02g089230.3 Solanum lycopersicum HOM05D004605 ORTHO05D005804 1.2e-13 83.6 180 29.4
Sopen02g034020 Solanum pennellii HOM05D004605 ORTHO05D005804 1.2e-13 83.6 180 29.4
MD09G1074300 Malus domestica HOM05D004605 ORTHO05D005804 1.5e-13 83.2 181 30.4
Phvul.008G027600 Phaseolus vulgaris HOM05D004605 ORTHO05D005804 2.0e-13 82.8 178 32.0
TPR.G23408 Trifolium pratense HOM05D004605 ORTHO05D005804 2.0e-13 82.8 184 32.1
Zm00001eb219300 Zea mays HOM05D004605 ORTHO05D005804 2.0e-13 82.8 180 30.0
Aqoxy3G03714 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 3.4e-13 82.0 183 31.1
Gohir.A07G179800 Gossypium hirsutum HOM05D004605 ORTHO05D005804 3.4e-13 82.0 182 31.9
Gohir.D07G186600 Gossypium hirsutum HOM05D004605 ORTHO05D005804 5.8e-13 81.3 182 31.3
Gorai.001G207200 Gossypium raimondii HOM05D004605 ORTHO05D005804 5.8e-13 81.3 182 31.3
ClCG07G016040 Citrullus lanatus HOM05D004605 ORTHO05D005804 7.6e-13 80.9 180 31.1
Haze_14382 Corylus avellana HOM05D004605 ORTHO05D005804 1.3e-12 80.1 176 31.2
MELO3C026298.2 Cucumis melo HOM05D004605 ORTHO05D005804 1.3e-12 80.1 180 31.1
HanXRQChr14g0452481 Helianthus annuus HOM05D004605 ORTHO05D005804 1.3e-12 80.1 178 28.7
Psat3g203400 Pisum sativum HOM05D004605 ORTHO05D005804 1.3e-12 80.1 178 29.2
AL7G51520 Arabidopsis lyrata HOM05D004605 ORTHO05D005804 1.7e-12 79.7 180 28.3
CAN.G497.71 Capsicum annuum HOM05D004605 ORTHO05D005804 1.7e-12 79.7 180 30.0
Aa31LG9G16810 Aethionema arabicum HOM05D004605 ORTHO05D005804 2.2e-12 79.3 180 30.6
Cfa007695 Carpinus fangiana HOM05D004605 ORTHO05D005804 2.2e-12 79.3 182 29.7
MD17G1065700 Malus domestica HOM05D004605 ORTHO05D005804 2.2e-12 79.3 180 30.0
THA.LOC104805526 Tarenaya hassleriana HOM05D004605 ORTHO05D005804 3.8e-12 78.6 180 30.6
CsaV3_4G010080 Cucumis sativus L. HOM05D004605 ORTHO05D005804 4.9e-12 78.2 180 30.6
Duzib138G1714 Durio zibethinus HOM05D004605 ORTHO05D005804 4.9e-12 78.2 182 30.2
Lju361C6G5 Lonicera japonica HOM05D004605 ORTHO05D005804 6.4e-12 77.8 183 29.5
VMungo1383G3490 Vigna mungo HOM05D004605 ORTHO05D005804 6.4e-12 77.8 177 30.5
Nitab4.5_0007530g0010 Nicotiana tabacum HOM05D004605 ORTHO05D005804 8.4e-12 77.4 180 28.9
Sed0020846 Sechium edule HOM05D004605 ORTHO05D005804 8.4e-12 77.4 180 29.4
SGA_v2.0_scaffold148G36445 Striga asiatica HOM05D004605 ORTHO05D005804 8.4e-12 77.4 178 28.7
Ciclev10012619m.g Citrus clementina HOM05D004605 ORTHO05D005804 1.1e-11 77.0 180 29.4
ECA238G2860 Erigeron canadensis HOM05D004605 ORTHO05D005804 1.1e-11 77.0 182 28.0
CiPaw.03G083000 Carya illinoinensis HOM05D004605 ORTHO05D005804 1.4e-11 76.6 180 29.4
arahy.Tifrunner.gnm1.ann1.M6S7AL Arachis hypogaea HOM05D004605 ORTHO05D005804 1.9e-11 76.3 178 30.3
Duzib133G0947 Durio zibethinus HOM05D004605 ORTHO05D005804 2.4e-11 75.9 179 29.6
Thhalv10027927m.g Eutrema salsugineum HOM05D004605 ORTHO05D005804 2.4e-11 75.9 180 28.9
Nitab4.5_0001339g0150 Nicotiana tabacum HOM05D004605 ORTHO05D005804 2.4e-11 75.9 180 27.8
Prupe.3G249100 Prunus persica HOM05D004605 ORTHO05D005804 2.4e-11 75.9 180 31.1
Medtr7g016650 Medicago truncatula HOM05D004605 ORTHO05D005804 3.2e-11 75.5 178 29.8
Migut.H00587 Erythranthe guttata HOM05D004605 ORTHO05D005804 4.2e-11 75.1 180 29.4
arahy.Tifrunner.gnm1.ann1.90K79T Arachis hypogaea HOM05D004605 ORTHO05D005804 5.4e-11 74.7 178 29.8
AUR62023160 Chenopodium quinoa HOM05D004605 ORTHO05D005804 5.4e-11 74.7 180 30.6
FvH4_6g46390 Fragaria vesca HOM05D004605 ORTHO05D005804 5.4e-11 74.7 183 29.0
Hma1.2p1_0474F.1_g160750 Hydrangea macrophylla HOM05D004605 ORTHO05D005804 7.1e-11 74.3 183 29.0
QL02p065873 Quercus lobata HOM05D004605 ORTHO05D005804 7.1e-11 74.3 175 28.6
Hund16233 Selenicereus undatus HOM05D004605 ORTHO05D005804 7.1e-11 74.3 182 27.5
Sc10g0000600 Simmondsia chinensis HOM05D004605 ORTHO05D005804 7.1e-11 74.3 132 35.6
CANSAT64G2231 Cannabis sativa HOM05D004605 ORTHO05D005804 9.3e-11 73.9 181 29.3
Lalb_Chr10g0092731 Lupinus albus HOM05D004605 ORTHO05D005804 9.3e-11 73.9 178 29.2
Manes.02G059400 Manihot esculenta HOM05D004605 ORTHO05D005804 9.3e-11 73.9 177 29.9
TAR629G2115 Trochodendron aralioides HOM05D004605 ORTHO05D005804 9.3e-11 73.9 183 29.5
CSS0024904 Camellia sinensis var. sinensis HOM05D004605 ORTHO05D005804 1.6e-10 73.2 180 27.2
GSVIVG01036547001 Vitis vinifera HOM05D004605 ORTHO05D005804 1.6e-10 73.2 180 28.9
TWI60G1007 Tripterygium wilfordii HOM05D004605 ORTHO05D005804 2.1e-10 72.8 179 27.4
Aqoxy3G03715 Aquilegia oxysepala HOM05D004605 ORTHO05D005804 2.7e-10 72.4 183 29.5
Thecc.04G106100 Theobroma cacao HOM05D004605 ORTHO05D005804 2.7e-10 72.4 182 28.6
Actinidia26268 Actinidia chinensis HOM05D004605 ORTHO05D005804 3.5e-10 72.0 180 28.3
AagrBONN_evm.TU.Sc2ySwM_340.410 Anthoceros agrestis HOM05D004605 ORTHO05D005804 4.6e-10 71.6 176 29.5
CiPaw.03G083100 Carya illinoinensis HOM05D004605 ORTHO05D005804 4.6e-10 71.6 180 28.9
MSTRG.15437 Avicennia marina HOM05D004605 ORTHO05D005804 7.9e-10 70.9 178 29.2
COL.COLO4_10258 Corchorus olitorius HOM05D004605 ORTHO05D005804 7.9e-10 70.9 180 27.8
FAN14G2038 Fragaria x ananassa HOM05D004605 ORTHO05D005804 7.9e-10 70.9 177 26.0
Manes.01G103400 Manihot esculenta HOM05D004605 ORTHO05D005804 7.9e-10 70.9 177 29.4
EL10Ac2g04442 Beta vulgaris HOM05D004605 ORTHO05D005804 1.0e-09 70.5 182 27.5
PSO732G0027 Papaver somniferum HOM05D004605 ORTHO05D005804 1.0e-09 70.5 183 29.0
Sabra17G0086200 Salix brachista HOM05D004605 ORTHO05D005804 1.0e-09 70.5 177 29.4
SalBow1G3999 Salvia bowleyana HOM05D004605 ORTHO05D005804 1.8e-09 69.7 181 28.7
Oeu031839.1 Olea europaea HOM05D004605 ORTHO05D005804 2.3e-09 69.3 180 27.8
RcHm_v2.0_Chr2g0164921 Rosa chinensis HOM05D004605 ORTHO05D005804 2.3e-09 69.3 180 27.8
Ca_06902_v3 Cicer arietinum L. HOM05D004605 ORTHO05D005804 3.0e-09 68.9 178 28.1
Atru.chr8.648 Acer truncatum HOM05D004605 ORTHO05D005804 3.9e-09 68.6 176 28.4
PSO675G6317 Papaver somniferum HOM05D004605 ORTHO05D005804 6.7e-09 67.8 183 27.9
Potri.017G100000 Populus trichocarpa HOM05D004605 ORTHO05D005804 6.7e-09 67.8 179 27.9
FAN02G3403 Fragaria x ananassa HOM05D004605 ORTHO05D005804 8.7e-09 67.4 137 31.4
Rhsim08G0077200 Rhododendron simsii HOM05D004605 ORTHO05D005804 8.7e-09 67.4 166 28.9
FAN05G4053 Fragaria x ananassa HOM05D004605 ORTHO05D005804 1.1e-08 67.0 191 26.2
Eucgr.I02062 Eucalyptus grandis HOM05D004605 ORTHO05D005804 1.9e-08 66.2 174 29.3
MBI16_g34534_MAGBIO Magnolia biondii HOM05D004605 ORTHO05D005804 2.5e-08 65.9 179 30.2
AagrBONN_evm.TU.Sc2ySwM_340.409 Anthoceros agrestis HOM05D004605 ORTHO05D005804 5.6e-08 64.7 121 33.1
Eucgr.L00305 Eucalyptus grandis HOM05D004605 ORTHO05D005804 7.4e-08 64.3 102 34.3
Cpa.g.sc14.228 Carica papaya HOM05D004605 ORTHO05D005804 9.6e-08 63.9 178 27.0
AUR62024435 Chenopodium quinoa HOM05D004605 ORTHO05D005804 1.3e-07 63.5 102 32.4
MSTRG.15436 Avicennia marina HOM05D004605 ORTHO05D005804 4.8e-07 61.6 152 28.9
FAN09G1153 Fragaria x ananassa HOM05D004605 ORTHO05D005804 8.1e-07 60.8 97 32.0
vmacro18128 Vaccinium macrocarpon HOM05D004605 ORTHO05D005804 8.1e-07 60.8 102 31.4
QL02p053766 Quercus lobata HOM05D004605 ORTHO05D005804 1.8e-06 59.7 99 31.3
Dinv33862 Davidia involucrata HOM05D004605 ORTHO05D005804 6.9e-06 57.8 77 33.8
FvH4_6g46370 Fragaria vesca HOM05D004605 ORTHO05D005804 9.0e-06 57.4 183 25.1


User provided reference genes

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