Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre12.g551900 Chlamydomonas reinhardtii HOM05D003922 ORTHO05D004492 3.2e-72 275.0 141 100.0
CBR_g3774 Chara braunii HOM05D003922 ORTHO05D004492 5.2e-14 81.6 129 34.1
Lsat_1_v5_gn_1_74581 Lactuca sativa HOM05D003922 ORTHO05D004492 1.0e-09 67.4 134 30.6
MCO09G689 Micromonas commoda HOM05D003922 ORTHO05D004492 1.7e-09 66.6 124 29.8
FAN02G1921 Fragaria x ananassa HOM05D003922 ORTHO05D004492 5.5e-08 61.6 126 30.2
FAN06G3125 Fragaria x ananassa HOM05D003922 ORTHO05D004492 5.5e-08 61.6 126 30.2
Pp3c22_16840 Physcomitrium patens HOM05D003922 ORTHO05D004492 7.2e-08 61.2 121 33.1
Rhsim09G0008700 Rhododendron simsii HOM05D003922 ORTHO05D004492 7.2e-08 61.2 136 27.2
CAN.G759.3 Capsicum annuum HOM05D003922 ORTHO05D004492 1.6e-07 60.1 124 28.2
HanXRQChr11g0343091 Helianthus annuus HOM05D003922 ORTHO05D004492 1.6e-07 60.1 132 29.5
Lj3P164T1 Lonicera japonica HOM05D003922 ORTHO05D004492 1.6e-07 60.1 109 33.0
Lju359P1T4 Lonicera japonica HOM05D003922 ORTHO05D004492 1.6e-07 60.1 109 33.0
Solyc08g014300.4 Solanum lycopersicum HOM05D003922 ORTHO05D004492 2.1e-07 59.7 124 29.0
Sopen08g005210 Solanum pennellii HOM05D003922 ORTHO05D004492 2.1e-07 59.7 124 29.0
SMO174G0123 Selaginella moellendorffii HOM05D003922 ORTHO05D004492 2.7e-07 59.3 123 27.6
CANSAT56G1338 Cannabis sativa HOM05D003922 ORTHO05D004492 4.7e-07 58.5 133 30.8
CAN.G1401.2 Capsicum annuum HOM05D003922 ORTHO05D004492 4.7e-07 58.5 134 26.1
DCAR_005455 Daucus carota HOM05D003922 ORTHO05D004492 6.1e-07 58.2 124 27.4
AagrBONN_evm.TU.Sc2ySwM_228.3693 Anthoceros agrestis HOM05D003922 ORTHO05D004492 8.0e-07 57.8 125 31.2
Sed0023559 Sechium edule HOM05D003922 ORTHO05D004492 8.0e-07 57.8 139 29.5
PGSC0003DMG400016054 Solanum tuberosum HOM05D003922 ORTHO05D004492 8.0e-07 57.8 124 29.0
ECA248G0756 Erigeron canadensis HOM05D003922 ORTHO05D004492 1.4e-06 57.0 132 28.0
Hund03208 Selenicereus undatus HOM05D003922 ORTHO05D004492 1.4e-06 57.0 132 26.5
Cc03_g14390 Coffea canephora HOM05D003922 ORTHO05D004492 1.8e-06 56.6 132 27.3
Eucgr.H00289 Eucalyptus grandis HOM05D003922 ORTHO05D004492 2.3e-06 56.2 132 25.8
AL4G26980 Arabidopsis lyrata HOM05D003922 ORTHO05D004492 3.0e-06 55.8 133 27.1
vmacro00688 Vaccinium macrocarpon HOM05D003922 ORTHO05D004492 3.0e-06 55.8 134 25.4
CSS0049854 Camellia sinensis var. sinensis HOM05D003922 ORTHO05D004492 4.0e-06 55.5 134 26.1
GSVIVG01035132001 Vitis vinifera HOM05D003922 ORTHO05D004492 4.0e-06 55.5 134 25.4
AT2G31725 Arabidopsis thaliana HOM05D003922 ORTHO05D004492 5.2e-06 55.1 133 26.3
BcaC07g42112 Brassica carinata HOM05D003922 ORTHO05D004492 5.2e-06 55.1 135 25.2
Dinv18325 Davidia involucrata HOM05D003922 ORTHO05D004492 5.2e-06 55.1 132 25.0
Migut.N03060 Erythranthe guttata HOM05D003922 ORTHO05D004492 5.2e-06 55.1 132 26.5
C04p18050 Brassica napus HOM05D003922 ORTHO05D004492 6.7e-06 54.7 133 25.6
BolC4t23353H Brassica oleracea HOM05D003922 ORTHO05D004492 6.7e-06 54.7 133 25.6
CiPaw.01G168800 Carya illinoinensis HOM05D003922 ORTHO05D004492 6.7e-06 54.7 132 25.8
Lj6A217G7 Lonicera japonica HOM05D003922 ORTHO05D004492 6.7e-06 54.7 134 27.6
EL10Ac3g06102 Beta vulgaris HOM05D003922 ORTHO05D004492 8.8e-06 54.3 124 27.4
ClCG11G013550 Citrullus lanatus HOM05D003922 ORTHO05D004492 8.8e-06 54.3 134 26.9
MELO3C011855.2 Cucumis melo HOM05D003922 ORTHO05D004492 8.8e-06 54.3 134 26.9
Sp1g04550 Schrenkiella parvula HOM05D003922 ORTHO05D004492 8.8e-06 54.3 135 24.4
Sc19g0002260 Simmondsia chinensis HOM05D003922 ORTHO05D004492 8.8e-06 54.3 134 26.1


User provided reference genes

Program Settings