Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre12.g538350 Chlamydomonas reinhardtii HOM05D005819 ORTHO05D006780 1.2e-94 349.7 173 100.0
Pp3c9_21390 Physcomitrium patens HOM05D005819 ORTHO05D006780 3.5e-28 129.0 138 48.6
Lalb_Chr22g0358491 Lupinus albus HOM05D005819 ORTHO05D006780 1.1e-26 124.0 115 52.2
arahy.Tifrunner.gnm1.ann1.7T7QMX Arachis hypogaea HOM05D005819 ORTHO05D006780 1.5e-26 123.6 115 52.2
MSTRG.14168 Avicennia marina HOM05D005819 ORTHO05D006780 1.5e-26 123.6 115 52.2
CSS0044572 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.5e-26 123.6 116 50.9
BraA03t12233Z Brassica rapa HOM05D005819 ORTHO05D006780 1.9e-26 123.2 151 43.7
Lsat_1_v5_gn_3_41801 Lactuca sativa HOM05D005819 ORTHO05D006780 2.5e-26 122.9 116 50.9
Hund06769 Selenicereus undatus HOM05D005819 ORTHO05D006780 2.5e-26 122.9 115 52.2
SEGI_37806 Sequoiadendron giganteum HOM05D005819 ORTHO05D006780 2.5e-26 122.9 114 52.6
A03p30520 Brassica napus HOM05D005819 ORTHO05D006780 3.2e-26 122.5 116 50.0
BraA09t35901Z Brassica rapa HOM05D005819 ORTHO05D006780 3.2e-26 122.5 116 49.1
CARHR251690 Cardamine hirsuta HOM05D005819 ORTHO05D006780 3.2e-26 122.5 116 50.0
HanXRQChr17g0543121 Helianthus annuus HOM05D005819 ORTHO05D006780 3.2e-26 122.5 113 51.3
Sp6g03280 Schrenkiella parvula HOM05D005819 ORTHO05D006780 4.2e-26 122.1 116 50.0
Ah.12g056190 Amaranthus hybridus HOM05D001579 ORTHO05D006780 5.5e-26 121.7 113 52.2
CDE02G1488 Ceratophyllum demersum HOM05D005819 ORTHO05D006780 5.5e-26 121.7 113 51.3
THA.LOC104806805 Tarenaya hassleriana HOM05D005819 ORTHO05D006780 5.5e-26 121.7 113 50.4
BcaC04g23988 Brassica carinata HOM05D005819 ORTHO05D006780 7.2e-26 121.3 116 49.1
Haze_13026 Corylus avellana HOM05D005819 ORTHO05D006780 7.2e-26 121.3 116 50.9
Glyma.19G118800 Glycine max HOM05D005819 ORTHO05D006780 7.2e-26 121.3 116 50.9
SGA_v2.0_scaffold159G37608 Striga asiatica HOM05D005819 ORTHO05D006780 7.2e-26 121.3 115 51.3
A09p02550 Brassica napus HOM05D005819 ORTHO05D006780 9.4e-26 120.9 116 49.1
CDE09G0293 Ceratophyllum demersum HOM05D007034 ORTHO05D006780 9.4e-26 120.9 142 43.0
FAN05G1257 Fragaria x ananassa HOM05D005819 ORTHO05D006780 9.4e-26 120.9 116 50.9
Medtr6g071520 Medicago truncatula HOM05D005819 ORTHO05D006780 9.4e-26 120.9 116 50.9
SalBow1G3361 Salvia bowleyana HOM05D005819 ORTHO05D006780 9.4e-26 120.9 115 51.3
SalBow1G8148 Salvia bowleyana HOM05D005819 ORTHO05D006780 9.4e-26 120.9 115 51.3
BcaC01g06695 Brassica carinata HOM05D005819 ORTHO05D006780 1.2e-25 120.6 181 39.2
CSS0036944 Camellia sinensis var. sinensis HOM05D005819 ORTHO05D006780 1.2e-25 120.6 111 51.4
CiPaw.03G166600 Carya illinoinensis HOM05D005819 ORTHO05D006780 1.2e-25 120.6 115 51.3
ECA246G1767 Erigeron canadensis HOM05D005819 ORTHO05D006780 1.2e-25 120.6 113 51.3
Medtr7g087030 Medicago truncatula HOM05D005819 ORTHO05D006780 1.2e-25 120.6 116 50.9
EL10Ac2g02755 Beta vulgaris HOM05D005819 ORTHO05D006780 1.6e-25 120.2 113 50.4
Ciclev10016814m.g Citrus clementina HOM05D005819 ORTHO05D006780 1.6e-25 120.2 113 51.3
Cc05_g05680 Coffea canephora HOM05D005819 ORTHO05D006780 1.6e-25 120.2 115 51.3
Eucgr.K00886 Eucalyptus grandis HOM05D005819 ORTHO05D006780 1.6e-25 120.2 115 50.4
FvH4_6g44280 Fragaria vesca HOM05D005819 ORTHO05D006780 1.6e-25 120.2 116 50.0
FAN14G4258 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.6e-25 120.2 116 50.0
Glyma.03G007300 Glycine max HOM05D005819 ORTHO05D006780 1.6e-25 120.2 116 50.0
Manes.18G113901 Manihot esculenta HOM05D005819 ORTHO05D006780 1.6e-25 120.2 113 50.4
BolC3t16000H Brassica oleracea HOM05D005819 ORTHO05D006780 2.1e-25 119.8 181 39.2
AUR62007448 Chenopodium quinoa HOM05D005819 ORTHO05D006780 2.1e-25 119.8 116 52.6
AUR62040308 Chenopodium quinoa HOM05D005819 ORTHO05D006780 2.1e-25 119.8 116 51.7
Os01g0783600 Oryza sativa ssp. japonica HOM05D005819 ORTHO05D006780 2.1e-25 119.8 115 50.4
Prupe.3G227000 Prunus persica HOM05D005819 ORTHO05D006780 2.1e-25 119.8 115 50.4
BcaB01g02514 Brassica carinata HOM05D005819 ORTHO05D006780 2.7e-25 119.4 116 49.1
Mapoly0009s0241 Marchantia polymorpha HOM05D005819 ORTHO05D006780 2.7e-25 119.4 113 52.2
Nn2g10488 Nelumbo nucifera HOM05D005819 ORTHO05D006780 2.7e-25 119.4 115 51.3
Nitab4.5_0004360g0020 Nicotiana tabacum HOM05D005819 ORTHO05D006780 2.7e-25 119.4 115 52.2
PSO170G6190 Papaver somniferum HOM05D005819 ORTHO05D006780 2.7e-25 119.4 115 50.4
PGSC0003DMG400026152 Solanum tuberosum HOM05D005819 ORTHO05D006780 2.7e-25 119.4 115 51.3
Aqoxy7G03432 Aquilegia oxysepala HOM05D005819 ORTHO05D006780 3.6e-25 119.0 113 50.4
Thhalv10028999m.g Eutrema salsugineum HOM05D005819 ORTHO05D006780 3.6e-25 119.0 116 50.0
Phvul.001G107000 Phaseolus vulgaris HOM05D005819 ORTHO05D006780 3.6e-25 119.0 115 52.2
Potri.013G150400 Populus trichocarpa HOM05D005819 ORTHO05D006780 3.6e-25 119.0 113 49.6
PGR142G2655 Punica granatum HOM05D005819 ORTHO05D006780 3.6e-25 119.0 115 50.4
Solyc07g053150.3 Solanum lycopersicum HOM05D005819 ORTHO05D006780 3.6e-25 119.0 115 51.3
AL6G49690 Arabidopsis lyrata HOM05D005819 ORTHO05D006780 4.7e-25 118.6 140 44.3
AT4G03240 Arabidopsis thaliana HOM05D005819 ORTHO05D006780 4.7e-25 118.6 116 48.3
CAN.G640.15 Capsicum annuum HOM05D005819 ORTHO05D006780 4.7e-25 118.6 115 51.3
Sabra13G0120900 Salix brachista HOM05D005819 ORTHO05D006780 4.7e-25 118.6 113 49.6
Thecc.02G167000 Theobroma cacao HOM05D005819 ORTHO05D006780 4.7e-25 118.6 115 50.4
Zm00001eb151360 Zea mays HOM05D005819 ORTHO05D006780 4.7e-25 118.6 115 48.7
Atru.chr6.3097 Acer truncatum HOM05D005819 ORTHO05D006780 6.1e-25 118.2 114 50.9
C03p36930 Brassica napus HOM05D005819 ORTHO05D006780 6.1e-25 118.2 179 39.1
ClCG02G011330 Citrullus lanatus HOM05D005819 ORTHO05D006780 6.1e-25 118.2 116 48.3
MELO3C013522.2 Cucumis melo HOM05D005819 ORTHO05D006780 6.1e-25 118.2 116 49.1
Gohir.D02G185101 Gossypium hirsutum HOM05D005819 ORTHO05D006780 6.1e-25 118.2 115 50.4
Gorai.005G207400 Gossypium raimondii HOM05D005819 ORTHO05D006780 6.1e-25 118.2 115 50.4
Hma1.2p1_1090F.1_g255750 Hydrangea macrophylla HOM05D005819 ORTHO05D006780 6.1e-25 118.2 113 49.6
Lj1g0005576 Lotus japonicus HOM05D005819 ORTHO05D006780 6.1e-25 118.2 115 50.4
RcHm_v2.0_Chr2g0161141 Rosa chinensis HOM05D005819 ORTHO05D006780 6.1e-25 118.2 116 50.0
Sopen07g026700 Solanum pennellii HOM05D005819 ORTHO05D006780 6.1e-25 118.2 115 51.3
GSVIVG01000441001 Vitis vinifera HOM05D005819 ORTHO05D006780 6.1e-25 118.2 116 50.0
FAN09G3032 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.0e-24 117.5 116 50.0
EL10Ac5g12980 Beta vulgaris HOM05D005819 ORTHO05D006780 1.4e-24 117.1 111 53.2
Duzib248G0701 Durio zibethinus HOM05D005819 ORTHO05D006780 1.4e-24 117.1 115 50.4
Gohir.A03G161900 Gossypium hirsutum HOM05D005819 ORTHO05D006780 1.4e-24 117.1 115 49.6
Peaxi162Scf00007g01734 Petunia axillaris HOM05D005819 ORTHO05D006780 1.4e-24 117.1 112 50.0
SHI10263 Sapria himalayana HOM05D005819 ORTHO05D006780 1.4e-24 117.1 114 49.1
SMO140G0069 Selaginella moellendorffii HOM05D005819 ORTHO05D006780 1.4e-24 117.1 107 49.5
Carub.0006s3382 Capsella rubella HOM05D005819 ORTHO05D006780 1.8e-24 116.7 135 43.7
CsaV3_6G012280 Cucumis sativus L. HOM05D005819 ORTHO05D006780 1.8e-24 116.7 116 48.3
Sc12g0002590 Simmondsia chinensis HOM05D005819 ORTHO05D006780 1.8e-24 116.7 139 45.3
Ca_03448_v3 Cicer arietinum L. HOM05D005819 ORTHO05D006780 2.3e-24 116.3 115 49.6
SGA_v2.0_scaffold49G18319 Striga asiatica HOM05D005819 ORTHO05D006780 2.3e-24 116.3 127 48.8
Sed0001645 Sechium edule HOM05D005819 ORTHO05D006780 3.0e-24 115.9 116 48.3
TPR.G7847 Trifolium pratense HOM05D005819 ORTHO05D006780 3.0e-24 115.9 116 48.3
VMungo0647G1299 Vigna mungo HOM05D005819 ORTHO05D006780 3.0e-24 115.9 115 50.4
Nitab4.5_0006653g0030 Nicotiana tabacum HOM05D005819 ORTHO05D006780 4.0e-24 115.5 115 50.4
CANSAT21G1768 Cannabis sativa HOM05D005819 ORTHO05D006780 5.2e-24 115.2 115 48.7
CBR_g3856 Chara braunii HOM05D005819 ORTHO05D006780 5.2e-24 115.2 115 47.8
MD17G1087700 Malus domestica HOM05D005819 ORTHO05D006780 5.2e-24 115.2 115 50.4
PSO210G2402 Papaver somniferum HOM05D005819 ORTHO05D006780 5.2e-24 115.2 115 48.7
unitig_749.g13948 Utricularia gibba HOM05D005819 ORTHO05D006780 5.2e-24 115.2 118 48.3
TWI18G0421 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 6.7e-24 114.8 113 51.3
SalBow6G6406 Salvia bowleyana HOM05D005819 ORTHO05D006780 1.1e-23 114.0 115 49.6
Migut.F00120 Erythranthe guttata HOM05D005819 ORTHO05D006780 2.6e-23 112.8 116 48.3
TAR626G0084 Trochodendron aralioides HOM05D005819 ORTHO05D006780 3.3e-23 112.5 104 51.9
VMungo1383G0784 Vigna mungo HOM05D005819 ORTHO05D006780 3.3e-23 112.5 115 49.6
Rhsim04G0058700 Rhododendron simsii HOM05D005819 ORTHO05D006780 4.4e-23 112.1 101 50.5
Zm00001eb034710 Zea mays HOM05D005819 ORTHO05D006780 7.5e-23 111.3 103 50.5
MCO13G341 Micromonas commoda HOM05D005819 ORTHO05D006780 6.3e-22 108.2 118 47.5
FAN02G1820 Fragaria x ananassa HOM05D005819 ORTHO05D006780 1.1e-21 107.5 137 42.3
Oeu037169.1 Olea europaea HOM05D005819 ORTHO05D006780 1.1e-21 107.5 114 47.4
Aa31LG5G2740 Aethionema arabicum HOM05D005819 ORTHO05D006780 1.8e-21 106.7 137 40.1
Oeu005644.2 Olea europaea HOM05D005819 ORTHO05D006780 3.1e-21 105.9 114 48.2
CiPaw.04G121300 Carya illinoinensis HOM05D005819 ORTHO05D006780 2.6e-20 102.8 96 52.1
QL08p035991 Quercus lobata HOM05D005819 ORTHO05D006780 3.5e-20 102.4 201 33.8
Medtr6g071700 Medicago truncatula HOM05D005819 ORTHO05D006780 8.5e-19 97.8 115 45.2
DCAR_009705 Daucus carota HOM05D005819 ORTHO05D006780 1.1e-18 97.4 140 37.9
PRCOL_00006727 Prasinoderma coloniale HOM05D005819 ORTHO05D006780 1.9e-18 96.7 97 50.5
arahy.Tifrunner.gnm1.ann1.Q06U4P Arachis hypogaea HOM05D005819 ORTHO05D006780 2.5e-18 96.3 164 36.0
AagrBONN_evm.TU.Sc2ySwM_117.2177 Anthoceros agrestis HOM05D005819 ORTHO05D006780 9.4e-18 94.4 80 52.5
DCAR_021205 Daucus carota HOM05D005819 ORTHO05D006780 1.2e-17 94.0 90 51.1
vmacro15799 Vaccinium macrocarpon HOM05D005819 ORTHO05D006780 2.7e-17 92.8 72 56.9
Dinv02570 Davidia involucrata HOM05D005819 ORTHO05D006780 3.6e-17 92.4 73 54.8
RhsimUnG0197800 Rhododendron simsii HOM05D005819 ORTHO05D006780 3.6e-17 92.4 72 54.2
Dinv13856 Davidia involucrata HOM05D005819 ORTHO05D006780 8.0e-17 91.3 71 57.7
TWI36G1190 Tripterygium wilfordii HOM05D005819 ORTHO05D006780 1.0e-16 90.9 72 58.3
Psat3g085640 Pisum sativum HOM05D005819 ORTHO05D006780 1.8e-16 90.1 72 55.6
BcaB01g01964 Brassica carinata HOM05D005819 ORTHO05D006780 3.0e-16 89.4 77 50.6
Oeu025479.1 Olea europaea HOM05D005819 ORTHO05D006780 6.8e-16 88.2 69 56.5
Sed0008711 Sechium edule HOM05D005819 ORTHO05D006780 1.5e-15 87.0 89 47.2
MD09G1099400 Malus domestica HOM05D005819 ORTHO05D006780 9.8e-15 84.3 115 41.7
Cfa024975 Carpinus fangiana HOM05D005819 ORTHO05D006780 1.8e-13 80.1 115 40.9
HanXRQChr04g0112441 Helianthus annuus HOM05D005819 ORTHO05D006780 1.6e-09 67.0 58 48.3
HPP92_008010 Vanilla planifolia HOM05D005819 ORTHO05D006780 1.6e-09 67.0 114 37.7


User provided reference genes

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