Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre12.g532900 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 1.8e-168 595.9 310 100.0
Cre14.g610550 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 2.2e-89 333.2 300 64.0
Cre14.g610631 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 6.5e-86 321.6 300 61.0
Cre14.g610582 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 2.6e-82 309.7 301 60.5
Cre04.g211700 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 1.4e-75 287.3 303 57.8
Cre03.g179650 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 2.0e-74 283.5 304 57.2
Cre04.g219400 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 4.5e-71 272.3 323 52.3
Cre04.g219600 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 3.0e-67 259.6 319 50.5
Cre09.g401219 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 3.1e-64 249.6 329 48.9
Cre01.g001600 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 7.0e-64 248.4 308 51.0
Cre03.g173165 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 2.0e-63 246.9 325 49.2
Cre04.g218400 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 5.0e-62 242.3 307 49.8
Cre16.g653258 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 2.9e-54 216.5 225 56.4
Cre04.g212100 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 1.3e-49 201.1 329 42.9
Cre02.g101300 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 3.2e-48 196.4 244 51.2
Cre04.g213650 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 9.8e-42 174.9 305 43.9
Cre04.g215450 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 2.9e-41 173.3 275 41.8
Cre04.g220250 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 5.0e-38 162.5 348 36.8
Cre02.g101550 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 5.6e-37 159.1 381 34.6
Cre02.g101150 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 7.8e-31 138.7 189 47.6
Cre03.g174150 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 1.9e-29 134.0 305 36.7
Cre02.g096700 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D011328 1.6e-23 114.4 308 33.1
Cre11.g479800 Chlamydomonas reinhardtii HOM05D016058 ORTHO05D011328 4.6e-15 86.3 186 37.1
Cre11.g480050 Chlamydomonas reinhardtii HOM05D016058 ORTHO05D011328 2.3e-14 84.0 159 39.6
Cre06.g278184 Chlamydomonas reinhardtii HOM05D016058 ORTHO05D011328 5.1e-14 82.8 106 45.3
Cre01.g048501 Chlamydomonas reinhardtii HOM05D016058 ORTHO05D011328 1.3e-12 78.2 114 42.1
Cre01.g022950 Chlamydomonas reinhardtii HOM05D016058 ORTHO05D011328 1.4e-11 74.7 162 37.0
Cre07.g335950 Chlamydomonas reinhardtii HOM05D016058 ORTHO05D011328 6.9e-11 72.4 187 34.8
Cre03.g151050 Chlamydomonas reinhardtii HOM05D016058 ORTHO05D011328 3.8e-09 66.6 150 35.3
Cre17.g731466 Chlamydomonas reinhardtii HOM05D009399 ORTHO05D140325 1.4e-08 64.7 127 35.4
Cre13.g583150 Chlamydomonas reinhardtii HOM05D050041 ORTHO05D141488 5.4e-08 62.8 239 29.7
Cre17.g700550 Chlamydomonas reinhardtii HOM05D016058 ORTHO05D011328 1.2e-07 61.6 225 30.7
Cre17.g700600 Chlamydomonas reinhardtii HOM05D016058 ORTHO05D011328 1.2e-07 61.6 205 32.2
Lalb_Chr01g0020141 Lupinus albus HOM05D002203 ORTHO05D002647 2.1e-07 60.8 130 30.0
Cre14.g614500 Chlamydomonas reinhardtii HOM05D050041 ORTHO05D144946 2.7e-07 60.5 316 27.8
Sp6g25080 Schrenkiella parvula HOM05D002203 ORTHO05D002647 4.6e-07 59.7 194 27.3
Zm00001eb174830 Zea mays HOM05D000563 ORTHO05D011328 4.6e-07 59.7 90 44.4
AagrBONN_evm.TU.Sc2ySwM_344.2946 Anthoceros agrestis HOM05D002203 ORTHO05D002647 1.0e-06 58.5 119 33.6
SEGI_25735 Sequoiadendron giganteum HOM05D002203 ORTHO05D002647 1.3e-06 58.2 119 33.6
ATR0626G299 Amborella trichopoda HOM05D002203 ORTHO05D002647 1.8e-06 57.8 105 32.4
Ca_10926_v3 Cicer arietinum L. HOM05D002203 ORTHO05D002647 2.3e-06 57.4 87 33.3
GSVIVG01017925001 Vitis vinifera HOM05D002203 ORTHO05D002647 2.3e-06 57.4 100 32.0
Medtr5g005940 Medicago truncatula HOM05D002203 ORTHO05D002647 3.0e-06 57.0 124 32.3
PSO170G5776 Papaver somniferum HOM05D002203 ORTHO05D002647 3.0e-06 57.0 100 33.0
PSO302G0024 Papaver somniferum HOM05D002203 ORTHO05D002647 3.0e-06 57.0 100 33.0
Atru.chr4.2512 Acer truncatum HOM05D002203 ORTHO05D002647 3.9e-06 56.6 100 32.0
CsaV3_3G013510 Cucumis sativus L. HOM05D002203 ORTHO05D002647 3.9e-06 56.6 167 29.3
Psat6g208840 Pisum sativum HOM05D002203 ORTHO05D002647 3.9e-06 56.6 119 32.8
SGA_v2.0_scaffold138G35338 Striga asiatica HOM05D002203 ORTHO05D002647 3.9e-06 56.6 104 30.8
C03p55040 Brassica napus HOM05D006660 ORTHO05D008184 5.1e-06 56.2 146 30.8
BolC3t17779H Brassica oleracea HOM05D006660 ORTHO05D008184 5.1e-06 56.2 146 30.8
BraA03t13574Z Brassica rapa HOM05D006660 ORTHO05D008184 5.1e-06 56.2 146 30.8
Sed0023903 Sechium edule HOM05D002203 ORTHO05D002647 5.1e-06 56.2 171 29.2
A03p09430 Brassica napus HOM05D002203 ORTHO05D002647 6.7e-06 55.8 100 31.0
A03p44410 Brassica napus HOM05D006660 ORTHO05D008184 6.7e-06 55.8 145 31.0
A10p20350 Brassica napus HOM05D002203 ORTHO05D002647 6.7e-06 55.8 100 31.0
C09p56950 Brassica napus HOM05D002203 ORTHO05D002647 6.7e-06 55.8 100 31.0
BolC9t58549H Brassica oleracea HOM05D002203 ORTHO05D002647 6.7e-06 55.8 100 31.0
BraA03t10261Z Brassica rapa HOM05D002203 ORTHO05D002647 6.7e-06 55.8 100 31.0
BraA10t44106Z Brassica rapa HOM05D002203 ORTHO05D002647 6.7e-06 55.8 100 31.0
Lj6C597G13 Lonicera japonica HOM05D002203 ORTHO05D002647 6.7e-06 55.8 100 32.0
MD11G1284800 Malus domestica HOM05D002203 ORTHO05D002647 6.7e-06 55.8 111 34.2
arahy.Tifrunner.gnm1.ann1.825X9M Arachis hypogaea HOM05D002203 ORTHO05D002647 8.7e-06 55.5 87 32.2
Glyma.11G004300 Glycine max HOM05D002203 ORTHO05D002647 8.7e-06 55.5 100 32.0
Hma1.2p1_0995F.1_g245630 Hydrangea macrophylla HOM05D002203 ORTHO05D002647 8.7e-06 55.5 111 32.4
Lalb_Chr16g0376391 Lupinus albus HOM05D002203 ORTHO05D002647 8.7e-06 55.5 124 30.6
Medtr1g104870 Medicago truncatula HOM05D002203 ORTHO05D002647 8.7e-06 55.5 119 32.8
Nn4g26258 Nelumbo nucifera HOM05D002203 ORTHO05D002647 8.7e-06 55.5 111 33.3


User provided reference genes

Program Settings