Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre12.g528050 Chlamydomonas reinhardtii HOM05D006540 ORTHO05D008202 2.4e-159 565.5 291 100.0
Zm00001eb096140 Zea mays HOM05D006540 ORTHO05D008202 1.9e-23 114.0 189 39.2
TPR.G17765 Trifolium pratense HOM05D006540 ORTHO05D008202 3.3e-23 113.2 146 43.2
Lsat_1_v5_gn_8_152220 Lactuca sativa HOM05D006540 ORTHO05D008202 1.6e-22 110.9 210 34.8
Peaxi162Scf00128g00138 Petunia axillaris HOM05D006540 ORTHO05D008202 2.1e-22 110.5 144 42.4
arahy.Tifrunner.gnm1.ann1.LD9JWE Arachis hypogaea HOM05D006540 ORTHO05D008202 3.6e-22 109.8 144 41.7
arahy.Tifrunner.gnm1.ann1.NX3C69 Arachis hypogaea HOM05D006540 ORTHO05D008202 3.6e-22 109.8 144 41.7
Medtr8g069450 Medicago truncatula HOM05D006540 ORTHO05D008202 3.6e-22 109.8 195 36.4
SMO347G0417 Selaginella moellendorffii HOM05D006540 ORTHO05D008202 3.6e-22 109.8 112 47.3
Mapoly0037s0067 Marchantia polymorpha HOM05D006540 ORTHO05D008202 4.8e-22 109.4 218 35.8
MCO07G599 Micromonas commoda HOM05D006540 ORTHO05D008202 4.8e-22 109.4 187 32.6
Ciclev10032003m.g Citrus clementina HOM05D006540 ORTHO05D008202 6.2e-22 109.0 140 42.1
Pp3c27_6670 Physcomitrium patens HOM05D006540 ORTHO05D008202 6.2e-22 109.0 159 40.3
AagrBONN_evm.TU.Sc2ySwM_340.367 Anthoceros agrestis HOM05D006540 ORTHO05D008202 1.4e-21 107.8 146 42.5
Os03g0428800 Oryza sativa ssp. japonica HOM05D006540 ORTHO05D008202 1.4e-21 107.8 200 38.0
Atru.chr11.2104 Acer truncatum HOM05D006540 ORTHO05D008202 1.8e-21 107.5 139 41.7
CAN.G832.5 Capsicum annuum HOM05D006540 ORTHO05D008202 1.8e-21 107.5 131 44.3
Phvul.003G064400 Phaseolus vulgaris HOM05D006540 ORTHO05D008202 1.8e-21 107.5 153 39.2
Psat4g116680 Pisum sativum HOM05D006540 ORTHO05D008202 1.8e-21 107.5 165 38.8
CANSAT35G0572 Cannabis sativa HOM05D006540 ORTHO05D008202 2.4e-21 107.1 162 38.9
AUR62024282 Chenopodium quinoa HOM05D006540 ORTHO05D008202 3.1e-21 106.7 220 32.3
PGSC0003DMG400018605 Solanum tuberosum HOM05D006540 ORTHO05D008202 3.1e-21 106.7 131 43.5
Ca_22583_v3 Cicer arietinum L. HOM05D006540 ORTHO05D008202 4.0e-21 106.3 185 36.8
vmacro01127 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 4.0e-21 106.3 225 34.2
VMungo0251G1250 Vigna mungo HOM05D006540 ORTHO05D008202 4.0e-21 106.3 140 39.3
Aa31LG2G5960 Aethionema arabicum HOM05D006540 ORTHO05D008202 5.3e-21 105.9 150 40.0
CiPaw.05G182700 Carya illinoinensis HOM05D006540 ORTHO05D008202 5.3e-21 105.9 117 47.0
BcaC06g31063 Brassica carinata HOM05D006540 ORTHO05D008202 6.9e-21 105.5 144 39.6
Cpa.g.sc33.16 Carica papaya HOM05D006540 ORTHO05D008202 6.9e-21 105.5 171 38.0
CDE09G1037 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 6.9e-21 105.5 158 41.1
CsaV3_5G031170 Cucumis sativus L. HOM05D006540 ORTHO05D008202 6.9e-21 105.5 139 41.0
Glyma.17G134500 Glycine max HOM05D006540 ORTHO05D008202 6.9e-21 105.5 126 42.9
MELO3C011955.2 Cucumis melo HOM05D006540 ORTHO05D008202 9.0e-21 105.1 139 41.0
ECA233G5619 Erigeron canadensis HOM05D006540 ORTHO05D008202 9.0e-21 105.1 140 40.0
Manes.13G024900 Manihot esculenta HOM05D006540 ORTHO05D008202 9.0e-21 105.1 131 43.5
SalBow2G2200 Salvia bowleyana HOM05D006540 ORTHO05D008202 9.0e-21 105.1 150 39.3
Sopen05g008320 Solanum pennellii HOM05D006540 ORTHO05D008202 9.0e-21 105.1 128 43.8
AT3G26580 Arabidopsis thaliana HOM05D006540 ORTHO05D008202 1.2e-20 104.8 150 41.3
ClCG05G025710 Citrullus lanatus HOM05D006540 ORTHO05D008202 1.2e-20 104.8 153 38.6
Nitab4.5_0000007g0060 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.2e-20 104.8 131 42.7
Nitab4.5_0003628g0010 Nicotiana tabacum HOM05D006540 ORTHO05D008202 1.2e-20 104.8 131 42.7
Sed0005489 Sechium edule HOM05D006540 ORTHO05D008202 1.2e-20 104.8 114 45.6
CDE02G2769 Ceratophyllum demersum HOM05D006540 ORTHO05D008202 1.5e-20 104.4 158 40.5
AUR62005459 Chenopodium quinoa HOM05D006540 ORTHO05D008202 1.5e-20 104.4 132 40.9
Thhalv10004491m.g Eutrema salsugineum HOM05D006540 ORTHO05D008202 1.5e-20 104.4 170 35.9
Gohir.A01G159600 Gossypium hirsutum HOM05D006540 ORTHO05D008202 1.5e-20 104.4 117 47.0
Sp2g15690 Schrenkiella parvula HOM05D006540 ORTHO05D008202 1.5e-20 104.4 144 38.9
BcaC06g33900 Brassica carinata HOM05D006540 ORTHO05D008202 2.0e-20 104.0 140 40.0
A06p41910 Brassica napus HOM05D006540 ORTHO05D008202 2.0e-20 104.0 140 40.0
C07p35560 Brassica napus HOM05D006540 ORTHO05D008202 2.0e-20 104.0 140 40.0
BolC7t44080H Brassica oleracea HOM05D006540 ORTHO05D008202 2.0e-20 104.0 140 40.0
BraA06t27110Z Brassica rapa HOM05D006540 ORTHO05D008202 2.0e-20 104.0 140 40.0
Cfa009208 Carpinus fangiana HOM05D006540 ORTHO05D008202 2.0e-20 104.0 129 44.2
Migut.K00595 Erythranthe guttata HOM05D006540 ORTHO05D008202 2.0e-20 104.0 150 38.7
Prupe.1G243900 Prunus persica HOM05D006540 ORTHO05D008202 2.0e-20 104.0 114 47.4
HPP92_002022 Vanilla planifolia HOM05D006540 ORTHO05D008202 2.0e-20 104.0 163 39.3
AL5G15370 Arabidopsis lyrata HOM05D006540 ORTHO05D008202 2.6e-20 103.6 150 40.7
Duzib268G1404 Durio zibethinus HOM05D006540 ORTHO05D008202 2.6e-20 103.6 154 40.3
FvH4_4g25530 Fragaria vesca HOM05D006540 ORTHO05D008202 2.6e-20 103.6 112 47.3
FAN07G1259 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.6e-20 103.6 129 43.4
FAN12G0822 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.6e-20 103.6 112 47.3
MBI10_g13027_MAGBIO Magnolia biondii HOM05D006540 ORTHO05D008202 2.6e-20 103.6 117 46.2
GSVIVG01004073001 Vitis vinifera HOM05D006540 ORTHO05D008202 2.6e-20 103.6 117 44.4
QL03p058139 Quercus lobata HOM05D006540 ORTHO05D008202 3.4e-20 103.2 114 46.5
RcHm_v2.0_Chr4g0432921 Rosa chinensis HOM05D006540 ORTHO05D008202 3.4e-20 103.2 113 46.0
Ah.03g133040 Amaranthus hybridus HOM05D006540 ORTHO05D008202 4.5e-20 102.8 153 39.2
Gohir.D01G150500 Gossypium hirsutum HOM05D006540 ORTHO05D008202 4.5e-20 102.8 117 46.2
Gorai.002G186600 Gossypium raimondii HOM05D006540 ORTHO05D008202 4.5e-20 102.8 117 46.2
PGR102G2745 Punica granatum HOM05D006540 ORTHO05D008202 4.5e-20 102.8 117 45.3
Rhsim12G0041000 Rhododendron simsii HOM05D006540 ORTHO05D008202 4.5e-20 102.8 114 46.5
CARHR147570 Cardamine hirsuta HOM05D006540 ORTHO05D008202 5.8e-20 102.4 151 37.7
MD13G1101900 Malus domestica HOM05D006540 ORTHO05D008202 5.8e-20 102.4 117 45.3
PSO017G4849 Papaver somniferum HOM05D006540 ORTHO05D008202 5.8e-20 102.4 130 42.3
Potri.013G090000 Populus trichocarpa HOM05D006540 ORTHO05D008202 5.8e-20 102.4 137 43.1
Aqoxy3G01202 Aquilegia oxysepala HOM05D006540 ORTHO05D008202 7.6e-20 102.1 140 40.7
EL10Ac6g13801 Beta vulgaris HOM05D006540 ORTHO05D008202 7.6e-20 102.1 227 32.2
Carub.0005s0457 Capsella rubella HOM05D006540 ORTHO05D008202 7.6e-20 102.1 131 41.2
HanXRQChr08g0208131 Helianthus annuus HOM05D006540 ORTHO05D008202 7.6e-20 102.1 192 35.9
Lalb_Chr05g0228421 Lupinus albus HOM05D006540 ORTHO05D008202 7.6e-20 102.1 100 48.0
MD16G1102400 Malus domestica HOM05D006540 ORTHO05D008202 7.6e-20 102.1 191 33.5
ATR0686G190 Amborella trichopoda HOM05D006540 ORTHO05D008202 9.9e-20 101.7 162 37.0
MSTRG.568 Avicennia marina HOM05D006540 ORTHO05D008202 9.9e-20 101.7 136 41.2
CSS0000303 Camellia sinensis var. sinensis HOM05D006540 ORTHO05D008202 9.9e-20 101.7 138 41.3
COL.COLO4_24263 Corchorus olitorius HOM05D006540 ORTHO05D008202 9.9e-20 101.7 138 39.9
DCAR_024432 Daucus carota HOM05D006540 ORTHO05D008202 9.9e-20 101.7 126 42.1
Dinv24788 Davidia involucrata HOM05D006540 ORTHO05D008202 9.9e-20 101.7 100 50.0
Sabra13G0070200 Salix brachista HOM05D006540 ORTHO05D008202 9.9e-20 101.7 125 42.4
Sc04g0009450 Simmondsia chinensis HOM05D006540 ORTHO05D008202 9.9e-20 101.7 174 38.5
TWI18G0987 Tripterygium wilfordii HOM05D006540 ORTHO05D008202 9.9e-20 101.7 114 46.5
TAR374G0845 Trochodendron aralioides HOM05D006540 ORTHO05D008202 9.9e-20 101.7 117 46.2
TAR622G1382 Trochodendron aralioides HOM05D006540 ORTHO05D008202 9.9e-20 101.7 100 50.0
Cc11_g15700 Coffea canephora HOM05D006540 ORTHO05D008202 1.3e-19 101.3 136 40.4
Haze_12245 Corylus avellana HOM05D006540 ORTHO05D008202 1.3e-19 101.3 98 49.0
THA.LOC104825662 Tarenaya hassleriana HOM05D006540 ORTHO05D008202 1.3e-19 101.3 140 40.0
Thecc.02G259400 Theobroma cacao HOM05D006540 ORTHO05D008202 1.3e-19 101.3 117 45.3
FAN17G1845 Fragaria x ananassa HOM05D006540 ORTHO05D008202 2.2e-19 100.5 112 45.5
PSO478G4529 Papaver somniferum HOM05D006540 ORTHO05D008202 2.2e-19 100.5 129 42.6
Rhsim12G0110600 Rhododendron simsii HOM05D006540 ORTHO05D008202 2.2e-19 100.5 147 38.1
vmacro16198 Vaccinium macrocarpon HOM05D006540 ORTHO05D008202 2.2e-19 100.5 147 38.1
Actinidia15092 Actinidia chinensis HOM05D006540 ORTHO05D008202 2.9e-19 100.1 117 45.3
Duzib248G0112 Durio zibethinus HOM05D006540 ORTHO05D008202 2.9e-19 100.1 126 42.9
Oeu059907.1 Olea europaea HOM05D006540 ORTHO05D008202 2.9e-19 100.1 140 39.3
Nn4g22628 Nelumbo nucifera HOM05D006540 ORTHO05D008202 3.8e-19 99.8 117 44.4
Eucgr.B03288 Eucalyptus grandis HOM05D006540 ORTHO05D008202 4.9e-19 99.4 148 38.5
FAN22G2305 Fragaria x ananassa HOM05D006540 ORTHO05D008202 4.9e-19 99.4 144 38.9
SEGI_37038 Sequoiadendron giganteum HOM05D006540 ORTHO05D008202 1.1e-18 98.2 129 41.1
Lj4g0023216 Lotus japonicus HOM05D006540 ORTHO05D008202 1.9e-18 97.4 144 38.2
BcaB01g00564 Brassica carinata HOM05D006540 ORTHO05D008202 2.4e-18 97.1 194 30.4
Actinidia37429 Actinidia chinensis HOM05D006540 ORTHO05D008202 4.2e-18 96.3 126 40.5
Lj6A811T79 Lonicera japonica HOM05D006540 ORTHO05D008202 7.1e-18 95.5 131 38.9
unitig_21.g20872 Utricularia gibba HOM05D006540 ORTHO05D008202 2.1e-17 94.0 144 37.5
Hma1.2p1_0223F.1_g093990 Hydrangea macrophylla HOM05D006540 ORTHO05D008202 5.6e-15 85.9 150 36.0
PRCOL_00004949 Prasinoderma coloniale HOM05D006540 ORTHO05D008202 1.4e-13 81.3 192 28.1
CBR_g8379 Chara braunii HOM05D006540 ORTHO05D008202 3.1e-13 80.1 83 47.0


User provided reference genes

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