Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre11.g475050 Chlamydomonas reinhardtii HOM05D004875 ORTHO05D005598 0.0e+00 1955.3 1128 100.0
PRCOL_00002473 Prasinoderma coloniale HOM05D004875 ORTHO05D005598 1.0e-51 209.9 932 30.9
AagrBONN_evm.TU.Sc2ySwM_228.3164 Anthoceros agrestis HOM05D004875 ORTHO05D005598 9.1e-45 186.8 1059 26.1
Hund05024 Selenicereus undatus HOM05D004875 ORTHO05D005598 1.5e-42 179.5 810 27.7
CANSAT54G1540 Cannabis sativa HOM05D004875 ORTHO05D005598 4.2e-42 177.9 735 26.9
Thecc.09G357800 Theobroma cacao HOM05D004875 ORTHO05D005598 5.5e-42 177.6 816 25.9
AUR62009668 Chenopodium quinoa HOM05D004875 ORTHO05D005598 2.1e-41 175.6 803 27.5
Medtr3g465700 Medicago truncatula HOM05D004875 ORTHO05D005598 2.7e-41 175.3 817 25.6
MBI15_g31180_MAGBIO Magnolia biondii HOM05D004875 ORTHO05D005598 3.6e-41 174.9 867 26.1
MD03G1056500 Malus domestica HOM05D004875 ORTHO05D005598 3.6e-41 174.9 814 26.5
ClCG02G019240 Citrullus lanatus HOM05D004875 ORTHO05D005598 1.8e-40 172.6 735 27.6
CARHR272270 Cardamine hirsuta HOM05D004875 ORTHO05D005598 2.3e-40 172.2 802 25.4
AUR62001870 Chenopodium quinoa HOM05D004875 ORTHO05D005598 4.0e-40 171.4 806 27.3
TWI79G1304 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 4.0e-40 171.4 810 26.0
Cc01_g14850 Coffea canephora HOM05D004875 ORTHO05D000053 5.2e-40 171.0 734 27.2
Sopen09g013270 Solanum pennellii HOM05D004875 ORTHO05D005598 5.2e-40 171.0 814 26.5
MD11G1058300 Malus domestica HOM05D004875 ORTHO05D005598 6.7e-40 170.6 815 26.3
Potri.013G152800 Populus trichocarpa HOM05D004875 ORTHO05D005598 8.8e-40 170.2 817 25.9
Prupe.6G048400 Prunus persica HOM05D004875 ORTHO05D005598 8.8e-40 170.2 817 26.2
TPR.G25698 Trifolium pratense HOM05D004875 ORTHO05D005598 8.8e-40 170.2 817 25.5
Ah.08g215110 Amaranthus hybridus HOM05D004875 ORTHO05D005598 1.5e-39 169.5 806 27.0
Carub.0008s1904 Capsella rubella HOM05D004875 ORTHO05D005598 2.6e-39 168.7 810 25.9
CsaV3_6G015880 Cucumis sativus L. HOM05D004875 ORTHO05D005598 3.3e-39 168.3 732 26.6
CBR_g50477 Chara braunii HOM05D004875 ORTHO05D005598 4.4e-39 167.9 1189 24.9
QL01p026245 Quercus lobata HOM05D004875 ORTHO05D005598 5.7e-39 167.5 819 26.4
AL8G34640 Arabidopsis lyrata HOM05D004875 ORTHO05D005598 7.5e-39 167.2 807 25.4
BcaB08g36179 Brassica carinata HOM05D004875 ORTHO05D005598 9.7e-39 166.8 808 25.6
COL.COLO4_11154 Corchorus olitorius HOM05D004875 ORTHO05D005598 1.7e-38 166.0 820 25.2
FAN21G2306 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.8e-38 165.2 809 26.3
AT5G58450 Arabidopsis thaliana HOM05D004875 ORTHO05D005598 3.7e-38 164.9 801 25.3
HanXRQChr13g0386431 Helianthus annuus HOM05D004875 ORTHO05D005598 4.8e-38 164.5 810 25.3
Mapoly0170s0019 Marchantia polymorpha HOM05D004875 ORTHO05D005598 4.8e-38 164.5 1066 25.7
CiPaw.13G069200 Carya illinoinensis HOM05D004875 ORTHO05D005598 6.3e-38 164.1 817 26.1
Lsat_1_v5_gn_9_14720 Lactuca sativa HOM05D004875 ORTHO05D005598 8.2e-38 163.7 734 26.2
FvH4_3g39760 Fragaria vesca HOM05D004875 ORTHO05D005598 1.1e-37 163.3 805 26.1
Gorai.009G113500 Gossypium raimondii HOM05D004875 ORTHO05D005598 1.1e-37 163.3 819 25.8
RcHm_v2.0_Chr5g0071641 Rosa chinensis HOM05D004875 ORTHO05D005598 1.1e-37 163.3 805 26.0
FAN11G0831 Fragaria x ananassa HOM05D004875 ORTHO05D005598 1.4e-37 162.9 806 26.2
MCO11G770 Micromonas commoda HOM05D004875 ORTHO05D005598 1.4e-37 162.9 1135 25.8
Haze_24411 Corylus avellana HOM05D004875 ORTHO05D005598 1.8e-37 162.5 852 25.1
Os05g0345400 Oryza sativa ssp. japonica HOM05D004875 ORTHO05D005598 1.8e-37 162.5 825 24.5
Sp6g20140 Schrenkiella parvula HOM05D004875 ORTHO05D005598 1.8e-37 162.5 801 25.1
CSS0036828 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 2.4e-37 162.2 803 26.7
FAN25G2145 Fragaria x ananassa HOM05D004875 ORTHO05D005598 2.4e-37 162.2 805 26.0
Gohir.D05G109200 Gossypium hirsutum HOM05D004875 ORTHO05D005598 2.4e-37 162.2 819 25.8
Phvul.006G074100 Phaseolus vulgaris HOM05D004875 ORTHO05D005598 2.4e-37 162.2 814 25.2
Eucgr.B04004 Eucalyptus grandis HOM05D004875 ORTHO05D005598 3.1e-37 161.8 802 26.4
C09p50320 Brassica napus HOM05D004875 ORTHO05D005598 4.1e-37 161.4 803 25.7
FAN16G0994 Fragaria x ananassa HOM05D004875 ORTHO05D005598 4.1e-37 161.4 805 25.8
Gohir.A05G109100 Gossypium hirsutum HOM05D004875 ORTHO05D005598 4.1e-37 161.4 819 25.8
TAR633G2039 Trochodendron aralioides HOM05D004875 ORTHO05D005598 4.1e-37 161.4 818 26.2
EL10Ac7g15921 Beta vulgaris HOM05D004875 ORTHO05D005598 5.3e-37 161.0 736 27.7
Manes.02G211800 Manihot esculenta HOM05D004875 ORTHO05D005598 5.3e-37 161.0 805 25.1
VMungo0540G0701 Vigna mungo HOM05D004875 ORTHO05D005598 5.3e-37 161.0 815 25.2
Thhalv10012545m.g Eutrema salsugineum HOM05D004875 ORTHO05D005598 9.1e-37 160.2 803 25.7
Actinidia32610 Actinidia chinensis HOM05D004875 ORTHO05D005598 1.2e-36 159.8 721 27.3
CSS0009670 Camellia sinensis var. sinensis HOM05D004875 ORTHO05D005598 1.2e-36 159.8 736 26.4
Ciclev10030286m.g Citrus clementina HOM05D004875 ORTHO05D005598 1.2e-36 159.8 733 26.1
HanXRQChr08g0228771 Helianthus annuus HOM05D004875 ORTHO05D005598 1.6e-36 159.5 738 26.3
TWI31G0826 Tripterygium wilfordii HOM05D004875 ORTHO05D005598 2.0e-36 159.1 805 24.8
Actinidia23196 Actinidia chinensis HOM05D004875 ORTHO05D005598 3.5e-36 158.3 803 26.8
MSTRG.12688 Avicennia marina HOM05D004875 ORTHO05D005598 3.5e-36 158.3 802 25.3
A10p15830 Brassica napus HOM05D004875 ORTHO05D005598 3.5e-36 158.3 803 25.5
THA.LOC104799387 Tarenaya hassleriana HOM05D004875 ORTHO05D005598 3.5e-36 158.3 802 25.6
ATR0594G111 Amborella trichopoda HOM05D004875 ORTHO05D005598 4.5e-36 157.9 798 26.2
BraA10t43642Z Brassica rapa HOM05D004875 ORTHO05D005598 7.7e-36 157.1 803 25.3
Glyma.18G057100 Glycine max HOM05D004875 ORTHO05D005598 1.0e-35 156.8 817 24.8
Lalb_Chr20g0114691 Lupinus albus HOM05D004875 ORTHO05D005598 1.0e-35 156.8 817 24.8
SalBow2G1321 Salvia bowleyana HOM05D004875 ORTHO05D005598 1.0e-35 156.8 732 26.1
Lj6g0003221 Lotus japonicus HOM05D004875 ORTHO05D005598 1.7e-35 156.0 813 25.1
Sed0004894 Sechium edule HOM05D004875 ORTHO05D005598 2.2e-35 155.6 732 26.4
BcaC04g19867 Brassica carinata HOM05D004875 ORTHO05D005598 2.9e-35 155.2 803 25.4
BolC9t57888H Brassica oleracea HOM05D004875 ORTHO05D005598 2.9e-35 155.2 803 25.4
Nn2g11010 Nelumbo nucifera HOM05D004875 ORTHO05D005598 2.9e-35 155.2 891 25.7
PGR102G0105 Punica granatum HOM05D004875 ORTHO05D005598 2.9e-35 155.2 811 25.4
Hma1.2p1_1692F.1_g297880 Hydrangea macrophylla HOM05D004875 ORTHO05D005598 5.0e-35 154.5 804 26.2
Aqoxy1G01286 Aquilegia oxysepala HOM05D004875 ORTHO05D005598 8.5e-35 153.7 802 24.3
DCAR_018231 Daucus carota HOM05D004875 ORTHO05D005598 1.1e-34 153.3 733 26.2
Glyma.11G163900 Glycine max HOM05D004875 ORTHO05D005598 3.2e-34 151.8 813 25.0
Rhsim13G0064100 Rhododendron simsii HOM05D004875 ORTHO05D005598 5.5e-34 151.0 817 25.8
Migut.N00759 Erythranthe guttata HOM05D004875 ORTHO05D005598 7.2e-34 150.6 812 24.8
arahy.Tifrunner.gnm1.ann1.LY55DJ Arachis hypogaea HOM05D004875 ORTHO05D005598 9.4e-34 150.2 805 25.0
ECA247G1423 Erigeron canadensis HOM05D004875 ORTHO05D005598 9.4e-34 150.2 737 25.9
arahy.Tifrunner.gnm1.ann1.7Z8DLY Arachis hypogaea HOM05D004875 ORTHO05D005598 1.6e-33 149.4 805 25.0
SGA_v2.0_scaffold146G36120 Striga asiatica HOM05D004875 ORTHO05D005598 2.1e-33 149.1 823 25.2
Cfa011778 Carpinus fangiana HOM05D004875 ORTHO05D005598 4.7e-33 147.9 818 24.9
GSVIVG01024634001 Vitis vinifera HOM05D004875 ORTHO05D005598 4.7e-33 147.9 819 25.3
Lj1C127G1 Lonicera japonica HOM05D004875 ORTHO05D005598 1.8e-32 146.0 733 26.6
Peaxi162Scf00055g01011 Petunia axillaris HOM05D004875 ORTHO05D005598 3.0e-32 145.2 556 29.0
Dinv09669 Davidia involucrata HOM05D004875 ORTHO05D005598 6.8e-32 144.1 645 28.2
Pp3c18_5510 Physcomitrium patens HOM05D004875 ORTHO05D005598 6.8e-32 144.1 795 24.0
Duzib168G1610 Durio zibethinus HOM05D004875 ORTHO05D005598 1.5e-31 142.9 807 24.7
Solyc09g057910.3 Solanum lycopersicum HOM05D004875 ORTHO05D005598 2.0e-31 142.5 555 28.6
Sabra13G0122800 Salix brachista HOM05D004875 ORTHO05D005598 3.4e-31 141.7 877 24.7
HPP92_003240 Vanilla planifolia HOM05D004875 ORTHO05D005598 3.4e-31 141.7 812 24.5
Aa31LG11G230 Aethionema arabicum HOM05D004875 ORTHO05D005598 2.2e-30 139.0 820 24.6
Cpa.g.sc2.355 Carica papaya HOM05D004875 ORTHO05D005598 1.8e-29 136.0 456 28.5
Psat5g154480 Pisum sativum HOM05D004875 ORTHO05D005598 2.4e-29 135.6 637 25.7
vmacro02918 Vaccinium macrocarpon HOM05D004875 ORTHO05D005598 2.4e-29 135.6 644 27.5
CDE07G1129 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 2.7e-28 132.1 302 35.1
Atru.chr3.4118 Acer truncatum HOM05D004875 ORTHO05D005598 1.0e-27 130.2 458 28.2
PSO349G0337 Papaver somniferum HOM05D004875 ORTHO05D005598 1.7e-27 129.4 737 25.1
Nitab4.5_0000002g0030 Nicotiana tabacum HOM05D004875 ORTHO05D005598 8.9e-24 117.1 276 35.1
PSO765G0012 Papaver somniferum HOM05D004875 ORTHO05D005598 2.6e-23 115.5 737 24.4
SEGI_14366 Sequoiadendron giganteum HOM05D004875 ORTHO05D005598 7.5e-23 114.0 757 23.9
Sc12g0001960 Simmondsia chinensis HOM05D004875 ORTHO05D005598 4.5e-20 104.8 272 33.5
MELO3C025695.2 Cucumis melo HOM05D004875 ORTHO05D005598 5.9e-20 104.4 263 32.7
Oeu019275.2 Olea europaea HOM05D004875 ORTHO05D005598 3.8e-19 101.7 279 33.0
CDE04G2228 Ceratophyllum demersum HOM05D004875 ORTHO05D005598 2.3e-16 92.4 782 23.5
Nitab4.5_0005130g0040 Nicotiana tabacum HOM05D004875 ORTHO05D005598 2.3e-16 92.4 624 24.7
Sc12g0001970 Simmondsia chinensis HOM05D004875 ORTHO05D005598 2.1e-09 69.3 477 24.3
SMO117G0137 Selaginella moellendorffii HOM05D004875 ORTHO05D005598 7.5e-07 60.8 77 37.7


User provided reference genes

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