Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre11.g474750 Chlamydomonas reinhardtii HOM05D009988 ORTHO05D012160 1.3e-242 842.8 473 100.0
Cre01.g031650 Chlamydomonas reinhardtii HOM05D009988 ORTHO05D012160 1.1e-87 328.2 316 57.0
SMO115G0210 Selaginella moellendorffii HOM05D009988 ORTHO05D012160 3.1e-47 193.7 244 42.6
CBR_g79 Chara braunii HOM05D009988 ORTHO05D012160 4.1e-47 193.4 246 42.7
CBR_g38033 Chara braunii HOM05D009988 ORTHO05D012160 1.2e-46 191.8 252 41.3
Mapoly0037s0032 Marchantia polymorpha HOM05D009988 ORTHO05D012160 5.9e-46 189.5 248 42.7
ATR0680G358 Amborella trichopoda HOM05D009988 ORTHO05D012160 5.0e-45 186.4 250 40.0
AagrBONN_evm.TU.Sc2ySwM_344.4840 Anthoceros agrestis HOM05D009988 ORTHO05D012160 6.5e-45 186.0 244 41.8
Pp3c7_7810 Physcomitrium patens HOM05D009988 ORTHO05D012160 2.1e-43 181.0 246 41.9
HPP92_022631 Vanilla planifolia HOM05D009988 ORTHO05D012160 3.6e-43 180.3 261 38.3
SEGI_09991 Sequoiadendron giganteum HOM05D009988 ORTHO05D012160 6.1e-43 179.5 244 41.8
CBR_g52629 Chara braunii HOM05D009988 ORTHO05D012160 6.7e-42 176.0 277 36.8
MBI17_g17489_MAGBIO Magnolia biondii HOM05D009988 ORTHO05D012160 4.4e-41 173.3 244 40.6
SEGI_34705 Sequoiadendron giganteum HOM05D009988 ORTHO05D012160 4.4e-41 173.3 247 39.7
Pp3c11_20260 Physcomitrium patens HOM05D009988 ORTHO05D012160 6.3e-40 169.5 236 41.5
Os07g0417800 Oryza sativa ssp. japonica HOM05D009988 ORTHO05D012160 6.5e-37 159.5 253 38.7
Zm00001eb094860 Zea mays HOM05D009988 ORTHO05D012160 1.6e-35 154.8 287 35.5
CDE06G2785 Ceratophyllum demersum HOM05D009988 ORTHO05D012160 2.2e-32 144.4 209 39.7
PRCOL_00005388 Prasinoderma coloniale HOM05D009988 ORTHO05D012160 1.0e-29 135.6 285 35.1
SMO356G0098 Selaginella moellendorffii HOM05D009988 ORTHO05D012160 5.5e-20 103.2 130 40.8
MCO03G331 Micromonas commoda HOM05D009988 ORTHO05D012160 7.0e-15 86.3 232 26.7
SEGI_04105 Sequoiadendron giganteum HOM05D009988 ORTHO05D012160 3.3e-12 77.4 59 55.9
Pp3c16_11470 Physcomitrium patens HOM05D003155 ORTHO05D043928 1.5e-09 68.6 221 24.4
Zm00001eb197650 Zea mays HOM05D000714 ORTHO05D000544 3.2e-07 60.8 145 33.1
CSS0028345 Camellia sinensis var. sinensis HOM05D000714 ORTHO05D000544 2.0e-06 58.2 145 31.0
VMungo1215G3064 Vigna mungo HOM05D000714 ORTHO05D000544 2.0e-06 58.2 145 32.4
Phvul.002G009900 Phaseolus vulgaris HOM05D000714 ORTHO05D000544 2.7e-06 57.8 145 32.4


User provided reference genes

Program Settings