Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre11.g467557 Chlamydomonas reinhardtii HOM05D041831 ORTHO05D004884 0.0e+00 1721.8 1147 100.0
Cre09.g388450 Chlamydomonas reinhardtii HOM05D004158 ORTHO05D004884 1.4e-62 246.1 895 28.4
Cre12.g553250 Chlamydomonas reinhardtii HOM05D000640 ORTHO05D004274 1.4e-12 80.1 48 70.8
CBR_g3248 Chara braunii HOM05D041831 ORTHO05D043929 3.5e-08 65.5 104 31.7
Nn3g17222 Nelumbo nucifera HOM05D000640 ORTHO05D004274 1.0e-07 63.9 48 52.1
Nn4g23143 Nelumbo nucifera HOM05D000640 ORTHO05D004274 1.0e-07 63.9 48 52.1
TAR374G1098 Trochodendron aralioides HOM05D000640 ORTHO05D004274 1.0e-07 63.9 48 54.2
Eucgr.I00555 Eucalyptus grandis HOM05D000640 ORTHO05D004274 1.3e-07 63.5 48 52.1
Lsat_1_v5_gn_5_44641 Lactuca sativa HOM05D000640 ORTHO05D004274 1.3e-07 63.5 48 52.1
SMO118G0481 Selaginella moellendorffii HOM05D000640 ORTHO05D004274 1.3e-07 63.5 50 50.0
SEGI_36503 Sequoiadendron giganteum HOM05D000640 ORTHO05D011181 1.3e-07 63.5 49 51.0
CSS0028623 Camellia sinensis var. sinensis HOM05D000640 ORTHO05D004274 1.7e-07 63.2 48 52.1
ECA246G4420 Erigeron canadensis HOM05D000640 ORTHO05D004274 1.7e-07 63.2 48 52.1
HanXRQChr16g0518061 Helianthus annuus HOM05D000640 ORTHO05D004274 1.7e-07 63.2 51 49.0
PSO478G2145 Papaver somniferum HOM05D000640 ORTHO05D004274 1.7e-07 63.2 48 52.1
GSVIVG01011393001 Vitis vinifera HOM05D000640 ORTHO05D004274 1.7e-07 63.2 49 51.0
Cfa004357 Carpinus fangiana HOM05D000640 ORTHO05D004274 2.3e-07 62.8 48 52.1
CiPaw.01G047300 Carya illinoinensis HOM05D000640 ORTHO05D004274 2.3e-07 62.8 48 52.1
CiPaw.02G021600 Carya illinoinensis HOM05D000640 ORTHO05D004274 2.3e-07 62.8 48 52.1
Dinv33753 Davidia involucrata HOM05D000640 ORTHO05D004274 2.3e-07 62.8 48 50.0
FAN23G0052 Fragaria x ananassa HOM05D000640 ORTHO05D004274 2.3e-07 62.8 48 52.1
FAN26G1057 Fragaria x ananassa HOM05D000640 ORTHO05D004274 2.3e-07 62.8 48 52.1
FAN28G1634 Fragaria x ananassa HOM05D000640 ORTHO05D004274 2.3e-07 62.8 48 52.1
PSO017G3545 Papaver somniferum HOM05D000640 ORTHO05D004274 2.3e-07 62.8 48 52.1
PSO675G4062 Papaver somniferum HOM05D000640 ORTHO05D004274 2.3e-07 62.8 48 50.0
QL06p047549 Quercus lobata HOM05D000640 ORTHO05D004274 2.3e-07 62.8 48 52.1
RcHm_v2.0_Chr2g0111921 Rosa chinensis HOM05D000640 ORTHO05D004274 2.3e-07 62.8 48 52.1
GSVIVG01003613001 Vitis vinifera HOM05D000640 ORTHO05D004274 2.3e-07 62.8 48 52.1
Actinidia06528 Actinidia chinensis HOM05D000640 ORTHO05D004274 3.0e-07 62.4 48 52.1
Ah.10g031520 Amaranthus hybridus HOM05D000640 ORTHO05D004274 3.0e-07 62.4 50 50.0
Aqoxy5G01329 Aquilegia oxysepala HOM05D000640 ORTHO05D004274 3.0e-07 62.4 49 49.0
EL10Ac2g02972 Beta vulgaris HOM05D000640 ORTHO05D004274 3.0e-07 62.4 50 50.0
AUR62034395 Chenopodium quinoa HOM05D000640 ORTHO05D004274 3.0e-07 62.4 50 50.0
AUR62039818 Chenopodium quinoa HOM05D000640 ORTHO05D004274 3.0e-07 62.4 50 50.0
Hma1.2p1_0045F.1_g026420 Hydrangea macrophylla HOM05D000640 ORTHO05D004274 3.0e-07 62.4 48 52.1
Lj4C271G9 Lonicera japonica HOM05D000640 ORTHO05D004274 3.0e-07 62.4 48 52.1
MBI02_g39063_MAGBIO Magnolia biondii HOM05D000640 ORTHO05D004274 3.0e-07 62.4 48 52.1
Rhsim10G0171500 Rhododendron simsii HOM05D000640 ORTHO05D004274 3.0e-07 62.4 48 52.1
vmacro12992 Vaccinium macrocarpon HOM05D000640 ORTHO05D004274 3.0e-07 62.4 48 52.1
Atru.chr3.1298 Acer truncatum HOM05D000640 ORTHO05D004274 3.9e-07 62.0 48 50.0
Actinidia25320 Actinidia chinensis HOM05D000640 ORTHO05D011181 3.9e-07 62.0 48 50.0
Cc07_g14330 Coffea canephora HOM05D000640 ORTHO05D004274 3.9e-07 62.0 48 50.0
Duzib147G1393 Durio zibethinus HOM05D000640 ORTHO05D004274 3.9e-07 62.0 48 50.0
Glyma.18G145500 Glycine max HOM05D000640 ORTHO05D004274 3.9e-07 62.0 48 52.1
Gohir.A02G130900 Gossypium hirsutum HOM05D000640 ORTHO05D004274 3.9e-07 62.0 48 50.0
Gohir.D03G042200 Gossypium hirsutum HOM05D000640 ORTHO05D004274 3.9e-07 62.0 48 50.0
Gorai.003G042800 Gossypium raimondii HOM05D000640 ORTHO05D004274 3.9e-07 62.0 48 50.0
Phvul.003G289600 Phaseolus vulgaris HOM05D000640 ORTHO05D004274 3.9e-07 62.0 48 52.1
Sed0015495 Sechium edule HOM05D000640 ORTHO05D004274 3.9e-07 62.0 48 50.0
Thecc.01G092600 Theobroma cacao HOM05D000640 ORTHO05D004274 3.9e-07 62.0 48 50.0
TAR628G0077 Trochodendron aralioides HOM05D000640 ORTHO05D004274 3.9e-07 62.0 48 50.0
ClCG10G008720 Citrullus lanatus HOM05D000640 ORTHO05D004274 5.0e-07 61.6 48 50.0
MELO3C018966.2 Cucumis melo HOM05D000640 ORTHO05D004274 5.0e-07 61.6 48 50.0
CsaV3_4G008960 Cucumis sativus L. HOM05D000640 ORTHO05D004274 5.0e-07 61.6 48 50.0
MBI02_g18286_MAGBIO Magnolia biondii HOM05D000640 ORTHO05D004274 5.0e-07 61.6 48 50.0
MD01G1037400 Malus domestica HOM05D000640 ORTHO05D004274 5.0e-07 61.6 48 52.1
MD15G1315500 Malus domestica HOM05D000640 ORTHO05D004274 5.0e-07 61.6 48 52.1
Manes.12G128200 Manihot esculenta HOM05D000640 ORTHO05D004274 5.0e-07 61.6 48 50.0
Peaxi162Scf00569g00013 Petunia axillaris HOM05D000640 ORTHO05D004274 5.0e-07 61.6 48 50.0
Potri.007G010300 Populus trichocarpa HOM05D000640 ORTHO05D004274 5.0e-07 61.6 48 50.0
Sabra07G0007800 Salix brachista HOM05D000640 ORTHO05D004274 5.0e-07 61.6 48 50.0
TWI53G0564 Tripterygium wilfordii HOM05D000640 ORTHO05D004274 5.0e-07 61.6 48 50.0
TWI74G0724 Tripterygium wilfordii HOM05D000640 ORTHO05D004274 5.0e-07 61.6 48 50.0
ATR0564G424 Amborella trichopoda HOM05D000640 ORTHO05D004274 6.6e-07 61.2 48 47.9
CAN.G525.43 Capsicum annuum HOM05D000640 ORTHO05D004274 6.6e-07 61.2 48 50.0
Nitab4.5_0000902g0100 Nicotiana tabacum HOM05D000640 ORTHO05D004274 6.6e-07 61.2 48 50.0
Nitab4.5_0001122g0150 Nicotiana tabacum HOM05D000640 ORTHO05D004274 6.6e-07 61.2 48 50.0
Prupe.6G196200 Prunus persica HOM05D000640 ORTHO05D004274 6.6e-07 61.2 48 50.0
PGR043G0003 Punica granatum HOM05D000640 ORTHO05D004274 6.6e-07 61.2 48 47.9
PGR083G2333 Punica granatum HOM05D000640 ORTHO05D004274 6.6e-07 61.2 48 47.9
Solyc04g014270.3 Solanum lycopersicum HOM05D000640 ORTHO05D004274 6.6e-07 61.2 48 50.0
Sopen04g006390 Solanum pennellii HOM05D000640 ORTHO05D004274 6.6e-07 61.2 48 50.0
PGSC0003DMG402023631 Solanum tuberosum HOM05D000640 ORTHO05D004274 6.6e-07 61.2 48 50.0
vmacro18571 Vaccinium macrocarpon HOM05D000640 ORTHO05D004274 6.6e-07 61.2 48 52.1
CDE02G3788 Ceratophyllum demersum HOM05D000640 ORTHO05D004274 8.6e-07 60.8 48 50.0
CDE09G1266 Ceratophyllum demersum HOM05D000640 ORTHO05D004274 8.6e-07 60.8 48 50.0
PSO063G0723 Papaver somniferum HOM05D000640 ORTHO05D004274 8.6e-07 60.8 48 52.1
Hund13219 Selenicereus undatus HOM05D000640 ORTHO05D004274 8.6e-07 60.8 50 48.0
unitig_899.g14558 Utricularia gibba HOM05D000640 ORTHO05D004274 8.6e-07 60.8 48 50.0
Aqoxy3G03364 Aquilegia oxysepala HOM05D000640 ORTHO05D004274 1.1e-06 60.5 48 50.0
Cpa.g.sc55.34 Carica papaya HOM05D000640 ORTHO05D004274 1.1e-06 60.5 48 47.9
Glyma.08G280700 Glycine max HOM05D000640 ORTHO05D004274 1.1e-06 60.5 48 50.0
Lj7C395T20 Lonicera japonica HOM05D000640 ORTHO05D004274 1.1e-06 60.5 48 50.0
Lj4g0017425 Lotus japonicus HOM05D000640 ORTHO05D004274 1.1e-06 60.5 48 50.0
Lalb_Chr16g0392161 Lupinus albus HOM05D000640 ORTHO05D004274 1.1e-06 60.5 48 50.0
VMungo0251G0351 Vigna mungo HOM05D000640 ORTHO05D004274 1.1e-06 60.5 48 50.0
Actinidia30842 Actinidia chinensis HOM05D000640 ORTHO05D004274 1.5e-06 60.1 48 47.9
Ah.03g141840 Amaranthus hybridus HOM05D000640 ORTHO05D004274 1.5e-06 60.1 48 47.9
Ca_25399_v3 Cicer arietinum L. HOM05D000640 ORTHO05D004274 1.5e-06 60.1 48 50.0
Lj2C537G2 Lonicera japonica HOM05D000640 ORTHO05D004274 1.5e-06 60.1 48 50.0
Nn5g29937 Nelumbo nucifera HOM05D000640 ORTHO05D004274 1.5e-06 60.1 48 47.9
Psat4g116320 Pisum sativum HOM05D000640 ORTHO05D004274 1.5e-06 60.1 48 50.0
FvH4_1g19980 Fragaria vesca HOM05D000640 ORTHO05D004274 1.9e-06 59.7 48 50.0
FAN19G1203 Fragaria x ananassa HOM05D000640 ORTHO05D004274 1.9e-06 59.7 48 50.0
Solyc11g010450.2 Solanum lycopersicum HOM05D000640 ORTHO05D004274 1.9e-06 59.7 48 47.9
Sopen11g005230 Solanum pennellii HOM05D000640 ORTHO05D004274 1.9e-06 59.7 48 47.9
PGSC0003DMG400016208 Solanum tuberosum HOM05D000640 ORTHO05D004274 1.9e-06 59.7 48 47.9
SGA_v2.0_scaffold548G52855 Striga asiatica HOM05D000640 ORTHO05D004274 1.9e-06 59.7 48 47.9
MSTRG.23367 Avicennia marina HOM05D000640 ORTHO05D004274 2.5e-06 59.3 48 47.9
CSS0033468 Camellia sinensis var. sinensis HOM05D000640 ORTHO05D004274 2.5e-06 59.3 48 50.0
CANSAT01G2559 Cannabis sativa HOM05D000640 ORTHO05D004274 2.5e-06 59.3 48 50.0
AUR62003284 Chenopodium quinoa HOM05D000640 ORTHO05D004274 2.5e-06 59.3 48 47.9
AUR62027181 Chenopodium quinoa HOM05D000640 ORTHO05D004274 2.5e-06 59.3 48 47.9
Ciclev10025337m.g Citrus clementina HOM05D000640 ORTHO05D004274 2.5e-06 59.3 48 47.9
Medtr8g069040 Medicago truncatula HOM05D000640 ORTHO05D004274 2.5e-06 59.3 48 47.9
TPR.G14617 Trifolium pratense HOM05D000640 ORTHO05D004274 2.5e-06 59.3 48 50.0
COL.COLO4_27338 Corchorus olitorius HOM05D000640 ORTHO05D004274 3.3e-06 58.9 48 47.9
Os09g0415800 Oryza sativa ssp. japonica HOM05D000640 ORTHO05D004274 3.3e-06 58.9 49 44.9
Migut.H02313 Erythranthe guttata HOM05D000640 ORTHO05D004274 4.3e-06 58.5 48 47.9
Zm00001eb041270 Zea mays HOM05D000640 ORTHO05D004274 4.3e-06 58.5 49 46.9
EL10Ac6g14793 Beta vulgaris HOM05D000640 ORTHO05D004274 5.6e-06 58.2 48 45.8
CAN.G1388.6 Capsicum annuum HOM05D000640 ORTHO05D004274 5.6e-06 58.2 48 45.8
Migut.K00774 Erythranthe guttata HOM05D000640 ORTHO05D004274 5.6e-06 58.2 48 45.8
Mapoly0002s0097 Marchantia polymorpha HOM05D000640 ORTHO05D004274 5.6e-06 58.2 48 50.0
Oeu000867.2 Olea europaea HOM05D000640 ORTHO05D004274 5.6e-06 58.2 48 45.8
Oeu055136.2 Olea europaea HOM05D000640 ORTHO05D004274 5.6e-06 58.2 48 45.8
Pp3c20_13380 Physcomitrium patens HOM05D000640 ORTHO05D004274 5.6e-06 58.2 48 50.0
Hund16545 Selenicereus undatus HOM05D000640 ORTHO05D004274 5.6e-06 58.2 48 43.8
Zm00001eb099530 Zea mays HOM05D000640 ORTHO05D004274 5.6e-06 58.2 49 44.9
Pp3c8_15610 Physcomitrium patens HOM05D000640 ORTHO05D004274 7.3e-06 57.8 48 47.9
Sp4g01500 Schrenkiella parvula HOM05D000640 ORTHO05D004274 9.5e-06 57.4 48 45.8
Zm00001eb048390 Zea mays HOM05D000640 ORTHO05D004274 9.5e-06 57.4 49 44.9


User provided reference genes

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