Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre10.g464350 Chlamydomonas reinhardtii HOM05D010091 ORTHO05D012356 3.9e-185 652.1 573 100.0
Cfa010532 Carpinus fangiana HOM05D016218 ORTHO05D000309 2.0e-08 65.1 53 50.9
Atru.chr4.980 Acer truncatum HOM05D002182 ORTHO05D004671 1.3e-07 62.4 119 35.3
Cfa012747 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.7e-07 62.0 54 48.1
Cfa017775 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.7e-07 62.0 53 49.1
Cfa014980 Carpinus fangiana HOM05D016218 ORTHO05D000309 5.0e-07 60.5 53 49.1
Cfa010691 Carpinus fangiana HOM05D016218 ORTHO05D000309 6.5e-07 60.1 53 49.1
Thecc.01G137400 Theobroma cacao HOM05D002182 ORTHO05D004671 6.5e-07 60.1 125 29.6
Cfa020977 Carpinus fangiana HOM05D016218 ORTHO05D000309 8.5e-07 59.7 53 47.2
COL.COLO4_35815 Corchorus olitorius HOM05D002182 ORTHO05D004671 8.5e-07 59.7 127 33.9
CAN.G163.2 Capsicum annuum HOM05D002182 ORTHO05D004671 1.1e-06 59.3 115 38.3
Cfa008132 Carpinus fangiana HOM05D016218 ORTHO05D000309 1.1e-06 59.3 53 47.2
Gohir.A11G057700 Gossypium hirsutum HOM05D002182 ORTHO05D004671 1.5e-06 58.9 120 30.0
Manes.13G078050 Manihot esculenta HOM05D002182 ORTHO05D004671 1.9e-06 58.5 117 28.2
EL10Ac4g09621 Beta vulgaris HOM05D002182 ORTHO05D004671 2.5e-06 58.2 121 34.7
Duzib264G0915 Durio zibethinus HOM05D002182 ORTHO05D004671 2.5e-06 58.2 123 26.8
Lsat_1_v5_gn_2_55560 Lactuca sativa HOM05D010091 ORTHO05D012356 2.5e-06 58.2 47 44.7
Gohir.D11G061900 Gossypium hirsutum HOM05D002182 ORTHO05D004671 3.2e-06 57.8 120 29.2
Gorai.007G066700 Gossypium raimondii HOM05D002182 ORTHO05D004671 3.2e-06 57.8 120 29.2
ClCG10G017010 Citrullus lanatus HOM05D002182 ORTHO05D004671 4.2e-06 57.4 127 28.3
Lj1g0008046 Lotus japonicus HOM05D002182 ORTHO05D004671 4.2e-06 57.4 127 33.9
Nitab4.5_0001277g0010 Nicotiana tabacum HOM05D002182 ORTHO05D004671 5.5e-06 57.0 111 27.0
Potri.005G067100 Populus trichocarpa HOM05D002182 ORTHO05D004671 5.5e-06 57.0 124 25.8
Lsat_1_v5_gn_0_12581 Lactuca sativa HOM05D010091 ORTHO05D012356 7.2e-06 56.6 47 42.6
Lsat_1_v5_gn_3_18240 Lactuca sativa HOM05D010091 ORTHO05D012356 7.2e-06 56.6 47 42.6
Lsat_1_v5_gn_4_63641 Lactuca sativa HOM05D010091 ORTHO05D012356 7.2e-06 56.6 47 42.6
Lsat_1_v5_gn_7_32160 Lactuca sativa HOM05D010091 ORTHO05D012356 7.2e-06 56.6 47 42.6
Lsat_1_v5_gn_7_32200 Lactuca sativa HOM05D010091 ORTHO05D012356 7.2e-06 56.6 47 42.6
Oeu050090.2 Olea europaea HOM05D002182 ORTHO05D004671 7.2e-06 56.6 119 26.1
THA.LOC104818422 Tarenaya hassleriana HOM05D002182 ORTHO05D004671 9.4e-06 56.2 112 43.8


User provided reference genes

Program Settings