Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre10.g464037 Chlamydomonas reinhardtii HOM05D030854 ORTHO05D001655 0.0e+00 1090.9 741 100.0
Cre03.g212529 Chlamydomonas reinhardtii HOM05D030854 ORTHO05D001655 3.6e-26 124.4 201 57.7
Cre03.g211297 Chlamydomonas reinhardtii HOM05D030854 ORTHO05D001655 4.0e-25 120.9 324 43.5
Cre03.g211969 Chlamydomonas reinhardtii HOM05D001799 ORTHO05D001655 3.5e-21 107.8 99 49.5
Cre03.g211857 Chlamydomonas reinhardtii HOM05D001799 ORTHO05D001655 1.0e-20 106.3 125 48.8
Cre10.g464133 Chlamydomonas reinhardtii HOM05D030854 ORTHO05D001655 1.0e-20 106.3 292 41.4
Cre03.g210625 Chlamydomonas reinhardtii HOM05D000515 ORTHO05D021272 5.1e-20 104.0 87 54.0
Cre03.g212417 Chlamydomonas reinhardtii HOM05D001799 ORTHO05D001655 7.4e-19 100.1 90 53.3
PRCOL_00000511 Prasinoderma coloniale HOM05D000515 ORTHO05D021272 2.5e-11 75.1 87 42.5
Migut.D00488 Erythranthe guttata HOM05D001799 ORTHO05D001655 9.6e-11 73.2 85 40.0
ECA248G2600 Erigeron canadensis HOM05D001799 ORTHO05D001655 6.2e-10 70.5 87 37.9
SalBow4G1659 Salvia bowleyana HOM05D001799 ORTHO05D001655 8.2e-10 70.1 92 37.0
SGA_v2.0_scaffold29G12192 Striga asiatica HOM05D001799 ORTHO05D001655 8.2e-10 70.1 87 35.6
Solyc09g064420.4 Solanum lycopersicum HOM05D001799 ORTHO05D001655 1.1e-09 69.7 87 39.1
HanXRQChr01g0014871 Helianthus annuus HOM05D001799 ORTHO05D001655 1.8e-09 68.9 87 35.6
Lsat_1_v5_gn_5_180101 Lactuca sativa HOM05D001799 ORTHO05D001655 2.4e-09 68.6 87 35.6
SGA_v2.0_scaffold1G00676 Striga asiatica HOM05D001799 ORTHO05D001655 5.3e-09 67.4 89 39.3
Potri.002G255400 Populus trichocarpa HOM05D001799 ORTHO05D001655 6.9e-09 67.0 90 41.1
Aqoxy1G01803 Aquilegia oxysepala HOM05D001799 ORTHO05D001655 9.0e-09 66.6 90 38.9
Atru.chr5.1957 Acer truncatum HOM05D001799 ORTHO05D001655 1.2e-08 66.2 109 33.9
Aqoxy1G01804 Aquilegia oxysepala HOM05D001799 ORTHO05D001655 1.2e-08 66.2 83 38.6
Ca_09641_v3 Cicer arietinum L. HOM05D001799 ORTHO05D001655 1.2e-08 66.2 79 39.2
Medtr1g069440 Medicago truncatula HOM05D001799 ORTHO05D001655 1.2e-08 66.2 79 39.2
Oeu052094.1 Olea europaea HOM05D001799 ORTHO05D001655 1.5e-08 65.9 83 37.3
Lalb_Chr02g0152781 Lupinus albus HOM05D001799 ORTHO05D001655 3.4e-08 64.7 93 33.3
Ah.08g213690 Amaranthus hybridus HOM05D001799 ORTHO05D001655 4.5e-08 64.3 92 35.9
MSTRG.18361 Avicennia marina HOM05D001799 ORTHO05D001655 4.5e-08 64.3 114 35.1
Atru.chr1.2423 Acer truncatum HOM05D001799 ORTHO05D001655 5.8e-08 63.9 88 40.9
CiPaw.03G272100 Carya illinoinensis HOM05D001799 ORTHO05D001655 5.8e-08 63.9 77 35.1
Hund21066 Selenicereus undatus HOM05D001799 ORTHO05D001655 7.6e-08 63.5 91 38.5
Lsat_1_v5_gn_8_91040 Lactuca sativa HOM05D001799 ORTHO05D001655 1.0e-07 63.2 87 34.5
CSS0002635 Camellia sinensis var. sinensis HOM05D001799 ORTHO05D001655 1.3e-07 62.8 81 37.0
Aqoxy1G01801 Aquilegia oxysepala HOM05D001799 ORTHO05D001655 1.7e-07 62.4 81 38.3
AL7G25010 Arabidopsis lyrata HOM05D001799 ORTHO05D001655 2.2e-07 62.0 100 41.0
BcaNung01644 Brassica carinata HOM05D001799 ORTHO05D001655 2.2e-07 62.0 83 41.0
Sc17g0002870 Simmondsia chinensis HOM05D001799 ORTHO05D001655 2.2e-07 62.0 90 33.3
Atru.chr12.2449 Acer truncatum HOM05D001799 ORTHO05D001655 2.9e-07 61.6 94 38.3
Atru.chr12.2490 Acer truncatum HOM05D001799 ORTHO05D001655 2.9e-07 61.6 94 38.3
Lalb_Chr20g0113491 Lupinus albus HOM05D001799 ORTHO05D001655 2.9e-07 61.6 81 35.8
QL09p042405 Quercus lobata HOM05D001799 ORTHO05D001655 3.8e-07 61.2 91 34.1
AUR62028089 Chenopodium quinoa HOM05D001799 ORTHO05D001655 4.9e-07 60.8 81 37.0
Hma1.2p1_2051F.1_g312570 Hydrangea macrophylla HOM05D001799 ORTHO05D001655 4.9e-07 60.8 79 36.7
Aqoxy1G02019 Aquilegia oxysepala HOM05D001799 ORTHO05D001655 1.1e-06 59.7 118 32.2
AUR62028090 Chenopodium quinoa HOM05D001799 ORTHO05D001655 1.1e-06 59.7 81 38.3
ECA236G3571 Erigeron canadensis HOM05D001799 ORTHO05D001655 1.1e-06 59.7 111 32.4
Lj3A893T82 Lonicera japonica HOM05D001799 ORTHO05D001655 1.1e-06 59.7 92 37.0
Thhalv10026379m.g Eutrema salsugineum HOM05D001799 ORTHO05D001655 1.4e-06 59.3 90 40.0
BcaC09g50556 Brassica carinata HOM05D001799 ORTHO05D001655 4.2e-06 57.8 83 39.8
CAN.G303.35 Capsicum annuum HOM05D001799 ORTHO05D001655 4.2e-06 57.8 84 38.1
AUR62005981 Chenopodium quinoa HOM05D001799 ORTHO05D001655 5.5e-06 57.4 81 34.6


User provided reference genes

Program Settings