Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre10.g463700 Chlamydomonas reinhardtii HOM05D006369 ORTHO05D007764 8.9e-203 710.7 495 100.0
Pp3c20_5600 Physcomitrium patens HOM05D006369 ORTHO05D007764 5.7e-16 90.1 135 41.5
CBR_g17900 Chara braunii HOM05D006369 ORTHO05D007764 5.4e-14 83.6 132 40.2
Mapoly0084s0069 Marchantia polymorpha HOM05D006369 ORTHO05D007764 1.6e-13 82.0 145 40.7
SEGI_01011 Sequoiadendron giganteum HOM05D006369 ORTHO05D007764 1.3e-12 79.0 152 36.8
FvH4_7g33790 Fragaria vesca HOM05D006369 ORTHO05D007764 3.8e-12 77.4 137 39.4
Prupe.2G324400 Prunus persica HOM05D006369 ORTHO05D007764 6.5e-12 76.6 141 36.9
SMO141G0301 Selaginella moellendorffii HOM05D006369 ORTHO05D007764 8.6e-12 76.3 128 36.7
FAN10G1961 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.1e-11 75.9 186 34.9
FAN10G2535 Fragaria x ananassa HOM05D006369 ORTHO05D007764 1.1e-11 75.9 186 34.9
FAN01G2653 Fragaria x ananassa HOM05D006369 ORTHO05D007764 2.5e-11 74.7 137 38.7
ClCG10G009050 Citrullus lanatus HOM05D006369 ORTHO05D007764 4.2e-11 73.9 119 37.8
MD01G1234200 Malus domestica HOM05D006369 ORTHO05D007764 7.2e-11 73.2 151 35.8
FAN03G1142 Fragaria x ananassa HOM05D006369 ORTHO05D007764 9.5e-11 72.8 186 34.4
FAN03G2967 Fragaria x ananassa HOM05D006369 ORTHO05D007764 9.5e-11 72.8 186 34.4
MD07G1306400 Malus domestica HOM05D006369 ORTHO05D007764 1.6e-10 72.0 138 37.0
Dinv29169 Davidia involucrata HOM05D006369 ORTHO05D007764 2.1e-10 71.6 121 38.0
Sed0025457 Sechium edule HOM05D006369 ORTHO05D007764 2.8e-10 71.2 136 33.1
Manes.08G163800 Manihot esculenta HOM05D006369 ORTHO05D007764 3.6e-10 70.9 140 35.7
HPP92_026820 Vanilla planifolia HOM05D006369 ORTHO05D007764 3.6e-10 70.9 143 34.3
TPR.G39567 Trifolium pratense HOM05D006369 ORTHO05D007764 4.7e-10 70.5 124 37.9
HanXRQChr17g0541681 Helianthus annuus HOM05D006369 ORTHO05D007764 6.1e-10 70.1 130 38.5
Aqoxy2G03109 Aquilegia oxysepala HOM05D006369 ORTHO05D007764 8.0e-10 69.7 143 35.7
TAR365G0740 Trochodendron aralioides HOM05D006369 ORTHO05D007764 8.0e-10 69.7 142 35.9
Os06g0300700 Oryza sativa ssp. japonica HOM05D006369 ORTHO05D007764 1.0e-09 69.3 125 38.4
RcHm_v2.0_Chr1g0383921 Rosa chinensis HOM05D006369 ORTHO05D007764 1.0e-09 69.3 138 38.4
AagrBONN_evm.TU.Sc2ySwM_344.1770 Anthoceros agrestis HOM05D006369 ORTHO05D007764 2.3e-09 68.2 175 32.0
MSTRG.8579 Avicennia marina HOM05D006369 ORTHO05D007764 2.3e-09 68.2 128 35.9
CsaV3_4G008720 Cucumis sativus L. HOM05D006369 ORTHO05D007764 2.3e-09 68.2 119 36.1
Migut.F00102 Erythranthe guttata HOM05D006369 ORTHO05D007764 2.3e-09 68.2 129 38.0
PSO210G6912 Papaver somniferum HOM05D006369 ORTHO05D007764 3.0e-09 67.8 135 37.8
Solyc03g062680.3 Solanum lycopersicum HOM05D006369 ORTHO05D007764 3.0e-09 67.8 111 37.8
Sopen03g015000 Solanum pennellii HOM05D006369 ORTHO05D007764 3.0e-09 67.8 111 37.8
SGA_v2.0_scaffold18G08505 Striga asiatica HOM05D006369 ORTHO05D007764 3.0e-09 67.8 144 34.0
Atru.chr7.1119 Acer truncatum HOM05D006369 ORTHO05D007764 4.0e-09 67.4 148 35.8
CiPaw.05G237500 Carya illinoinensis HOM05D006369 ORTHO05D007764 4.0e-09 67.4 137 35.0
CiPaw.06G019700 Carya illinoinensis HOM05D006369 ORTHO05D007764 4.0e-09 67.4 132 38.6
MELO3C024871.2 Cucumis melo HOM05D006369 ORTHO05D007764 4.0e-09 67.4 110 37.3
Lj3g0017971 Lotus japonicus HOM05D006369 ORTHO05D007764 4.0e-09 67.4 165 35.8
Potri.019G052400 Populus trichocarpa HOM05D006369 ORTHO05D007764 4.0e-09 67.4 125 36.8
Ciclev10021854m.g Citrus clementina HOM05D006369 ORTHO05D007764 5.2e-09 67.0 130 38.5
Gohir.A07G176900 Gossypium hirsutum HOM05D006369 ORTHO05D007764 5.2e-09 67.0 146 36.3
Lsat_1_v5_gn_3_37940 Lactuca sativa HOM05D006369 ORTHO05D007764 5.2e-09 67.0 130 36.2
Hund18049 Selenicereus undatus HOM05D006369 ORTHO05D007764 5.2e-09 67.0 124 37.9
Ca_04928_v3 Cicer arietinum L. HOM05D006369 ORTHO05D007764 6.8e-09 66.6 120 38.3
PSO170G0520 Papaver somniferum HOM05D006369 ORTHO05D007764 6.8e-09 66.6 135 37.0
Cc02_g00390 Coffea canephora HOM05D006369 ORTHO05D007764 8.8e-09 66.2 138 36.2
CANSAT21G0373 Cannabis sativa HOM05D006369 ORTHO05D007764 1.2e-08 65.9 122 37.7
Cfa015892 Carpinus fangiana HOM05D006369 ORTHO05D007764 1.2e-08 65.9 145 34.5
ECA246G2850 Erigeron canadensis HOM05D006369 ORTHO05D007764 1.2e-08 65.9 156 35.3
Glyma.11G092500 Glycine max HOM05D006369 ORTHO05D007764 1.2e-08 65.9 128 36.7
Gohir.D07G184401 Gossypium hirsutum HOM05D006369 ORTHO05D007764 1.5e-08 65.5 146 34.9
GSVIVG01024423001 Vitis vinifera HOM05D006369 ORTHO05D007764 1.5e-08 65.5 127 37.0
Actinidia00694 Actinidia chinensis HOM05D006369 ORTHO05D007764 2.0e-08 65.1 121 36.4
CDE02G3455 Ceratophyllum demersum HOM05D006369 ORTHO05D007764 2.0e-08 65.1 109 37.6
Nitab4.5_0000820g0010 Nicotiana tabacum HOM05D006369 ORTHO05D007764 2.0e-08 65.1 146 34.2
BcaNung00427 Brassica carinata HOM05D006369 ORTHO05D007764 3.4e-08 64.3 154 32.5
Glyma.12G018800 Glycine max HOM05D006369 ORTHO05D007764 3.4e-08 64.3 116 38.8
Nitab4.5_0000001g0150 Nicotiana tabacum HOM05D006369 ORTHO05D007764 4.4e-08 63.9 111 38.7
ATR0213G006 Amborella trichopoda HOM05D006369 ORTHO05D007764 5.7e-08 63.5 100 41.0
Psat7g171520 Pisum sativum HOM05D006369 ORTHO05D007764 5.7e-08 63.5 120 36.7
Sc05g0004440 Simmondsia chinensis HOM05D006369 ORTHO05D007764 5.7e-08 63.5 166 35.5
VMungo1127G0993 Vigna mungo HOM05D006369 ORTHO05D007764 5.7e-08 63.5 111 39.6
Ah.08g212670 Amaranthus hybridus HOM05D006369 ORTHO05D007764 7.5e-08 63.2 134 33.6
Gorai.001G204600 Gossypium raimondii HOM05D006369 ORTHO05D007764 7.5e-08 63.2 146 34.2
Zm00001eb381130 Zea mays HOM05D006369 ORTHO05D007764 7.5e-08 63.2 164 31.7
AT5G17070 Arabidopsis thaliana HOM05D006369 ORTHO05D007764 9.8e-08 62.8 115 35.7
CAN.G317.12 Capsicum annuum HOM05D006369 ORTHO05D007764 9.8e-08 62.8 111 36.9
Lj1A1033G61 Lonicera japonica HOM05D006369 ORTHO05D007764 9.8e-08 62.8 111 35.1
Peaxi162Scf00076g00928 Petunia axillaris HOM05D006369 ORTHO05D007764 9.8e-08 62.8 111 36.0
Phvul.011G021200 Phaseolus vulgaris HOM05D006369 ORTHO05D007764 9.8e-08 62.8 111 38.7
Psat1g047200 Pisum sativum HOM05D006369 ORTHO05D007764 9.8e-08 62.8 116 37.1
A02p03940 Brassica napus HOM05D006369 ORTHO05D007764 1.3e-07 62.4 149 31.5
Lalb_Chr19g0139881 Lupinus albus HOM05D006369 ORTHO05D007764 1.3e-07 62.4 131 36.6
Thhalv10014449m.g Eutrema salsugineum HOM05D006369 ORTHO05D007764 1.7e-07 62.0 118 34.7
BcaC03g18532 Brassica carinata HOM05D006369 ORTHO05D007764 2.2e-07 61.6 149 31.5
BolC2t06790H Brassica oleracea HOM05D006369 ORTHO05D007764 2.2e-07 61.6 149 31.5
BraA02t05358Z Brassica rapa HOM05D006369 ORTHO05D007764 2.2e-07 61.6 147 30.6
Psat1g047280 Pisum sativum HOM05D006369 ORTHO05D007764 2.2e-07 61.6 116 37.1
Haze_00598 Corylus avellana HOM05D006369 ORTHO05D007764 2.8e-07 61.2 106 40.6
Medtr4g077610 Medicago truncatula HOM05D006369 ORTHO05D007764 4.9e-07 60.5 175 30.3
AL6G28090 Arabidopsis lyrata HOM05D006369 ORTHO05D007764 6.3e-07 60.1 115 33.9
arahy.Tifrunner.gnm1.ann1.WFP97B Arachis hypogaea HOM05D006369 ORTHO05D007764 6.3e-07 60.1 113 38.1
CARHR196110 Cardamine hirsuta HOM05D006369 ORTHO05D007764 6.3e-07 60.1 113 34.5
Duzib211G0044 Durio zibethinus HOM05D006369 ORTHO05D007764 8.3e-07 59.7 110 36.4
Sp6g27090 Schrenkiella parvula HOM05D006369 ORTHO05D007764 8.3e-07 59.7 164 29.9
Thecc.03G000800 Theobroma cacao HOM05D006369 ORTHO05D007764 8.3e-07 59.7 140 31.4
EL10Ac7g17391 Beta vulgaris HOM05D006369 ORTHO05D007764 1.1e-06 59.3 166 31.3
Psat1g047240 Pisum sativum HOM05D006369 ORTHO05D007764 1.4e-06 58.9 109 36.7
THA.LOC104820876 Tarenaya hassleriana HOM05D006369 ORTHO05D007764 1.4e-06 58.9 163 30.1
C02p08760 Brassica napus HOM05D006369 ORTHO05D007764 1.8e-06 58.5 165 30.9
Eucgr.A02962 Eucalyptus grandis HOM05D006369 ORTHO05D007764 2.4e-06 58.2 119 33.6
Carub.0006s1525 Capsella rubella HOM05D006369 ORTHO05D007764 3.1e-06 57.8 115 33.9
Nn3g21321 Nelumbo nucifera HOM05D006369 ORTHO05D007764 4.1e-06 57.4 134 34.3
MBI06_g08525_MAGBIO Magnolia biondii HOM05D006369 ORTHO05D007764 5.4e-06 57.0 171 32.2
SalBow4G3280 Salvia bowleyana HOM05D006369 ORTHO05D007764 5.4e-06 57.0 161 30.4
Aa31LG11G12610 Aethionema arabicum HOM05D006369 ORTHO05D007764 9.2e-06 56.2 161 28.6


User provided reference genes

Program Settings