Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre10.g461851 Chlamydomonas reinhardtii HOM05D004458 ORTHO05D141749 1.2e-242 843.2 588 100.0
Cre10.g461895 Chlamydomonas reinhardtii HOM05D004458 ORTHO05D140860 6.5e-10 70.1 77 50.6
Medtr2g033020 Medicago truncatula HOM05D004458 ORTHO05D005455 1.1e-06 59.3 145 29.0
Pp3c20_22450 Physcomitrium patens HOM05D004458 ORTHO05D005455 1.1e-06 59.3 85 37.6
DCAR_026969 Daucus carota HOM05D004458 ORTHO05D005455 1.5e-06 58.9 112 34.8
PRCOL_00002737 Prasinoderma coloniale HOM05D004458 ORTHO05D005455 1.5e-06 58.9 91 37.4
Pp3c10_21790 Physcomitrium patens HOM05D004458 ORTHO05D005455 1.9e-06 58.5 85 36.5
Rhsim04G0243100 Rhododendron simsii HOM05D004458 ORTHO05D005455 1.9e-06 58.5 112 35.7
arahy.Tifrunner.gnm1.ann1.PZ9WPP Arachis hypogaea HOM05D004458 ORTHO05D005455 2.5e-06 58.2 125 31.2
Aa31LG11G8410 Aethionema arabicum HOM05D004458 ORTHO05D005455 3.3e-06 57.8 114 34.2
Cre09.g394750 Chlamydomonas reinhardtii HOM05D004458 ORTHO05D005455 3.3e-06 57.8 88 36.4
AL6G41130 Arabidopsis lyrata HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
AT5G30510 Arabidopsis thaliana HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
arahy.Tifrunner.gnm1.ann1.C83F23 Arachis hypogaea HOM05D004458 ORTHO05D005455 5.7e-06 57.0 125 30.4
arahy.Tifrunner.gnm1.ann1.G3761Q Arachis hypogaea HOM05D004458 ORTHO05D005455 5.7e-06 57.0 125 30.4
arahy.Tifrunner.gnm1.ann1.QN1HMQ Arachis hypogaea HOM05D004458 ORTHO05D005455 5.7e-06 57.0 125 30.4
MSTRG.24833 Avicennia marina HOM05D004458 ORTHO05D005455 5.7e-06 57.0 112 33.9
EL10Ac3g06292 Beta vulgaris HOM05D004458 ORTHO05D005455 5.7e-06 57.0 112 33.9
BcaB04g19641 Brassica carinata HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
BcaC04g23713 Brassica carinata HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
BcaC06g30694 Brassica carinata HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
BcaNung02119 Brassica carinata HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
A06p38180 Brassica napus HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
A09p05060 Brassica napus HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
C07p40030 Brassica napus HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
C09p05470 Brassica napus HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
BolC7t44537H Brassica oleracea HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
BraA06t26733Z Brassica rapa HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
BraA09t36145Z Brassica rapa HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
Carub.0020s0005 Capsella rubella HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
CAN.G484.78 Capsicum annuum HOM05D004458 ORTHO05D005455 5.7e-06 57.0 79 34.2
CARHR185550 Cardamine hirsuta HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
Thhalv10004302m.g Eutrema salsugineum HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
Hma1.2p1_1096F.1_g256640 Hydrangea macrophylla HOM05D004458 ORTHO05D005455 5.7e-06 57.0 112 34.8
Oeu052155.2 Olea europaea HOM05D004458 ORTHO05D005455 5.7e-06 57.0 112 34.8
PGR004G0801 Punica granatum HOM05D004458 ORTHO05D005455 5.7e-06 57.0 112 34.8
Sp2g19940 Schrenkiella parvula HOM05D004458 ORTHO05D005455 5.7e-06 57.0 114 34.2
Atru.chr4.3103 Acer truncatum HOM05D004458 ORTHO05D005455 7.4e-06 56.6 112 33.9
BolC9t53476H Brassica oleracea HOM05D004458 ORTHO05D005455 7.4e-06 56.6 114 34.2
Cpa.g.sc146.69 Carica papaya HOM05D004458 ORTHO05D005455 7.4e-06 56.6 114 34.2
Cfa015690 Carpinus fangiana HOM05D004458 ORTHO05D005455 7.4e-06 56.6 112 33.9
CiPaw.01G133400 Carya illinoinensis HOM05D004458 ORTHO05D005455 7.4e-06 56.6 112 33.9
CiPaw.02G072000 Carya illinoinensis HOM05D004458 ORTHO05D005455 7.4e-06 56.6 112 33.9
Ca_00945_v3 Cicer arietinum L. HOM05D004458 ORTHO05D005455 7.4e-06 56.6 144 29.2
Ca_00951_v3 Cicer arietinum L. HOM05D004458 ORTHO05D005455 7.4e-06 56.6 144 29.2
Haze_00830 Corylus avellana HOM05D004458 ORTHO05D005455 7.4e-06 56.6 112 33.9
Dinv15126 Davidia involucrata HOM05D004458 ORTHO05D005455 7.4e-06 56.6 79 35.4
Migut.G00023 Erythranthe guttata HOM05D004458 ORTHO05D005455 7.4e-06 56.6 112 33.9
Eucgr.H04084 Eucalyptus grandis HOM05D004458 ORTHO05D005455 7.4e-06 56.6 112 33.9
Mapoly0018s0004 Marchantia polymorpha HOM05D004458 ORTHO05D005455 7.4e-06 56.6 85 34.1
Phvul.006G121100 Phaseolus vulgaris HOM05D004458 ORTHO05D005455 7.4e-06 56.6 83 33.7
Prupe.1G111400 Prunus persica HOM05D004458 ORTHO05D005455 7.4e-06 56.6 79 35.4
QL06p013334 Quercus lobata HOM05D004458 ORTHO05D005455 7.4e-06 56.6 112 33.9
THA.LOC104818863 Tarenaya hassleriana HOM05D004458 ORTHO05D005455 7.4e-06 56.6 114 34.2
vmacro07975 Vaccinium macrocarpon HOM05D004458 ORTHO05D005455 7.4e-06 56.6 112 34.8
VMungo0540G1791 Vigna mungo HOM05D004458 ORTHO05D005455 7.4e-06 56.6 83 33.7
GSVIVG01034940001 Vitis vinifera HOM05D004458 ORTHO05D005455 7.4e-06 56.6 112 33.9
Actinidia18482 Actinidia chinensis HOM05D004458 ORTHO05D005455 9.7e-06 56.2 112 34.8
Aqoxy2G02626 Aquilegia oxysepala HOM05D004458 ORTHO05D005455 9.7e-06 56.2 79 35.4
CSS0034217 Camellia sinensis var. sinensis HOM05D004458 ORTHO05D005455 9.7e-06 56.2 112 34.8
CANSAT78G1602 Cannabis sativa HOM05D004458 ORTHO05D005455 9.7e-06 56.2 112 33.9
CBR_g34276 Chara braunii HOM05D004458 ORTHO05D005455 9.7e-06 56.2 87 34.5
Ciclev10005364m.g Citrus clementina HOM05D004458 ORTHO05D005455 9.7e-06 56.2 112 33.9
DCAR_002527 Daucus carota HOM05D004458 ORTHO05D005455 9.7e-06 56.2 123 31.7
Glyma.17G037700 Glycine max HOM05D004458 ORTHO05D005455 9.7e-06 56.2 79 34.2
Lj3A836T25 Lonicera japonica HOM05D004458 ORTHO05D005455 9.7e-06 56.2 83 34.9
Lj6g0001722 Lotus japonicus HOM05D004458 ORTHO05D005455 9.7e-06 56.2 125 30.4
SalBow8G3582 Salvia bowleyana HOM05D004458 ORTHO05D005455 9.7e-06 56.2 112 34.8
SMO146G0227 Selaginella moellendorffii HOM05D004458 ORTHO05D005455 9.7e-06 56.2 85 35.3
Solyc01g057830.3 Solanum lycopersicum HOM05D004458 ORTHO05D005455 9.7e-06 56.2 112 33.9
Sopen01g023160 Solanum pennellii HOM05D004458 ORTHO05D005455 9.7e-06 56.2 112 33.9
Thecc.04G307500 Theobroma cacao HOM05D004458 ORTHO05D005455 9.7e-06 56.2 112 33.9
TWI09G1490 Tripterygium wilfordii HOM05D004458 ORTHO05D005455 9.7e-06 56.2 79 35.4
TWI53G1192 Tripterygium wilfordii HOM05D004458 ORTHO05D005455 9.7e-06 56.2 79 35.4
unitig_8.g3100 Utricularia gibba HOM05D004458 ORTHO05D005455 9.7e-06 56.2 112 34.8
VMungo1215G3325 Vigna mungo HOM05D004458 ORTHO05D005455 9.7e-06 56.2 79 34.2


User provided reference genes

Program Settings