Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre10.g446800 Chlamydomonas reinhardtii HOM05D002027 ORTHO05D007928 2.1e-261 905.2 478 100.0
CDE07G0566 Ceratophyllum demersum HOM05D002027 ORTHO05D002544 3.8e-08 63.9 125 35.2
ClCG05G015810 Citrullus lanatus HOM05D002027 ORTHO05D007928 8.4e-08 62.8 126 31.7
Oeu022307.1 Olea europaea HOM05D002027 ORTHO05D007928 1.4e-07 62.0 125 31.2
Oeu024212.1 Olea europaea HOM05D002027 ORTHO05D007928 1.4e-07 62.0 125 31.2
Ciclev10008420m.g Citrus clementina HOM05D002027 ORTHO05D007928 1.9e-07 61.6 125 32.0
COL.COLO4_21153 Corchorus olitorius HOM05D002027 ORTHO05D007928 2.4e-07 61.2 127 30.7
Migut.A00065 Erythranthe guttata HOM05D002027 ORTHO05D007928 2.4e-07 61.2 125 29.6
Manes.03G054000 Manihot esculenta HOM05D002027 ORTHO05D007928 2.4e-07 61.2 126 29.4
Sabra06G0169500 Salix brachista HOM05D002027 ORTHO05D007928 3.2e-07 60.8 126 31.0
Oeu024211.1 Olea europaea HOM05D002027 ORTHO05D007928 4.2e-07 60.5 125 30.4
Psat6g021720 Pisum sativum HOM05D002027 ORTHO05D007928 4.2e-07 60.5 125 32.0
Aa31LG5G9500 Aethionema arabicum HOM05D002027 ORTHO05D007016 5.4e-07 60.1 125 31.2
Haze_18309 Corylus avellana HOM05D002027 ORTHO05D007928 5.4e-07 60.1 116 32.8
Sp4g06660 Schrenkiella parvula HOM05D002027 ORTHO05D007928 5.4e-07 60.1 103 34.0
CSS0036822 Camellia sinensis var. sinensis HOM05D002027 ORTHO05D007928 7.1e-07 59.7 103 35.9
CsaV3_4G036100 Cucumis sativus L. HOM05D002027 ORTHO05D007928 7.1e-07 59.7 125 31.2
Potri.006G219600 Populus trichocarpa HOM05D002027 ORTHO05D007928 7.1e-07 59.7 125 30.4
THA.LOC104803709 Tarenaya hassleriana HOM05D002027 ORTHO05D007928 7.1e-07 59.7 125 30.4
Dinv22945 Davidia involucrata HOM05D002027 ORTHO05D007928 9.3e-07 59.3 125 30.4
Lj7A212G30 Lonicera japonica HOM05D002027 ORTHO05D007928 9.3e-07 59.3 125 30.4
Lj7A214T27 Lonicera japonica HOM05D002027 ORTHO05D007928 9.3e-07 59.3 125 30.4
Sopen08g016820 Solanum pennellii HOM05D002027 ORTHO05D007928 9.3e-07 59.3 125 30.4
PGSC0003DMG400024394 Solanum tuberosum HOM05D002027 ORTHO05D007928 9.3e-07 59.3 125 30.4
AL4G18930 Arabidopsis lyrata HOM05D002027 ORTHO05D007928 1.2e-06 58.9 103 35.0
AT2G26310 Arabidopsis thaliana HOM05D002027 ORTHO05D007928 1.2e-06 58.9 103 35.0
BcaC02g08291 Brassica carinata HOM05D002027 ORTHO05D007928 1.2e-06 58.9 103 33.0
A04p20340 Brassica napus HOM05D002027 ORTHO05D007928 1.2e-06 58.9 103 33.0
C04p56040 Brassica napus HOM05D002027 ORTHO05D007928 1.2e-06 58.9 103 33.0
BolC4t27137H Brassica oleracea HOM05D002027 ORTHO05D007928 1.2e-06 58.9 103 33.0
BraA04t17613Z Brassica rapa HOM05D002027 ORTHO05D007928 1.2e-06 58.9 103 33.0
Carub.0004s0620 Capsella rubella HOM05D002027 ORTHO05D007928 1.2e-06 58.9 103 34.0
HPP92_009227 Vanilla planifolia HOM05D002027 ORTHO05D007928 1.2e-06 58.9 125 31.2
Ah.12g061280 Amaranthus hybridus HOM05D002027 ORTHO05D007928 1.6e-06 58.5 103 34.0
ATR0598G318 Amborella trichopoda HOM05D002027 ORTHO05D007928 1.6e-06 58.5 125 33.6
Solyc08g061480.3 Solanum lycopersicum HOM05D002027 ORTHO05D007928 1.6e-06 58.5 125 30.4
Potri.018G048500 Populus trichocarpa HOM05D002027 ORTHO05D007928 2.1e-06 58.2 186 28.5
Cfa017863 Carpinus fangiana HOM05D000120 ORTHO05D007928 2.7e-06 57.8 116 31.0
GSVIVG01035482001 Vitis vinifera HOM05D002027 ORTHO05D007928 2.7e-06 57.8 126 31.0
Aqoxy7G01035 Aquilegia oxysepala HOM05D002027 ORTHO05D007928 4.6e-06 57.0 125 30.4
PGR004G1932 Punica granatum HOM05D002027 ORTHO05D007928 4.6e-06 57.0 125 29.6
TWI34G0836 Tripterygium wilfordii HOM05D002027 ORTHO05D007928 4.6e-06 57.0 103 35.9
TAR636G2984 Trochodendron aralioides HOM05D002027 ORTHO05D007928 4.6e-06 57.0 128 31.2
Rhsim06G0100500 Rhododendron simsii HOM05D002027 ORTHO05D007928 6.0e-06 56.6 125 29.6
Zm00001eb373710 Zea mays HOM05D002027 ORTHO05D007928 6.0e-06 56.6 191 27.7
MBI19_g44268_MAGBIO Magnolia biondii HOM05D002027 ORTHO05D007928 7.9e-06 56.2 109 34.9


User provided reference genes

Program Settings