Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre10.g441450 Chlamydomonas reinhardtii HOM05D005724 ORTHO05D006636 0.0e+00 1176.8 876 100.0
ATR0307G120 Amborella trichopoda HOM05D005724 ORTHO05D006636 1.0e-59 236.1 677 31.2
AagrBONN_evm.TU.Sc2ySwM_228.2542 Anthoceros agrestis HOM05D005724 ORTHO05D006636 5.6e-58 230.3 641 35.9
Sc16g0010460 Simmondsia chinensis HOM05D005724 ORTHO05D006636 6.8e-56 223.4 692 34.0
TAR623G1038 Trochodendron aralioides HOM05D005724 ORTHO05D006636 8.9e-56 223.0 619 32.3
TAR369G1103 Trochodendron aralioides HOM05D005724 ORTHO05D006636 3.4e-55 221.1 625 33.1
Hma1.2p1_0023F.1_g015530 Hydrangea macrophylla HOM05D005724 ORTHO05D006636 3.2e-53 214.5 621 31.6
Pp3c2_10220 Physcomitrium patens HOM05D005724 ORTHO05D006636 1.6e-52 212.2 667 33.9
unitig_46.g18493 Utricularia gibba HOM05D005724 ORTHO05D006636 3.5e-52 211.1 640 31.1
Mapoly0032s0003 Marchantia polymorpha HOM05D005724 ORTHO05D006636 4.6e-52 210.7 620 36.3
Mapoly0029s0120 Marchantia polymorpha HOM05D005724 ORTHO05D006636 6.0e-52 210.3 626 35.5
CSS0043370 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 1.0e-51 209.5 630 34.1
Oeu040430.1 Olea europaea HOM05D005724 ORTHO05D006636 1.9e-50 205.3 668 33.2
Dinv40379 Davidia involucrata HOM05D005724 ORTHO05D006636 4.3e-50 204.1 635 31.3
Actinidia03489 Actinidia chinensis HOM05D005724 ORTHO05D006636 6.2e-49 200.3 637 32.5
Migut.C01153 Erythranthe guttata HOM05D005724 ORTHO05D006636 2.6e-47 194.9 633 31.8
CsaV3_4G029120 Cucumis sativus L. HOM05D005724 ORTHO05D006636 4.4e-47 194.1 646 31.1
vmacro00813 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 5.8e-47 193.7 670 28.7
VMungo0540G1901 Vigna mungo HOM05D005724 ORTHO05D006636 5.8e-47 193.7 678 28.8
MSTRG.1463 Avicennia marina HOM05D005724 ORTHO05D006636 9.9e-47 193.0 543 34.8
Lalb_Chr18g0058031 Lupinus albus HOM05D005724 ORTHO05D006636 1.3e-46 192.6 661 30.0
SGA_v2.0_scaffold52G18986 Striga asiatica HOM05D005724 ORTHO05D006636 1.3e-46 192.6 675 34.7
DCAR_014109 Daucus carota HOM05D005724 ORTHO05D006636 1.7e-46 192.2 620 31.1
SEGI_23235 Sequoiadendron giganteum HOM05D005724 ORTHO05D006636 1.7e-46 192.2 655 37.3
Peaxi162Scf00691g00055 Petunia axillaris HOM05D005724 ORTHO05D006636 2.9e-46 191.4 658 34.0
Ca_00849_v3 Cicer arietinum L. HOM05D005724 ORTHO05D006636 1.1e-45 189.5 640 28.0
Sabra01G0096300 Salix brachista HOM05D005724 ORTHO05D006636 2.4e-45 188.3 675 30.7
TWI12G1283 Tripterygium wilfordii HOM05D005724 ORTHO05D006636 6.0e-44 183.7 637 30.0
Ah.06g195410 Amaranthus hybridus HOM05D005724 ORTHO05D006636 7.8e-44 183.3 649 34.5
PGR031G2108 Punica granatum HOM05D005724 ORTHO05D006636 1.7e-43 182.2 680 27.4
Psat0s1379g0200 Pisum sativum HOM05D005724 ORTHO05D006636 3.9e-43 181.0 668 27.5
Aqoxy1G00698 Aquilegia oxysepala HOM05D005724 ORTHO05D006636 5.1e-43 180.6 680 30.7
MBI13_g30854_MAGBIO Magnolia biondii HOM05D005724 ORTHO05D006636 6.6e-43 180.3 665 29.2
Os05g0490000 Oryza sativa ssp. japonica HOM05D005724 ORTHO05D006636 6.6e-43 180.3 620 33.2
Sed0018672 Sechium edule HOM05D005724 ORTHO05D006636 6.6e-43 180.3 667 30.6
CANSAT35G0128 Cannabis sativa HOM05D005724 ORTHO05D006636 1.1e-42 179.5 649 34.4
CAN.G219.49 Capsicum annuum HOM05D005724 ORTHO05D006636 1.1e-42 179.5 672 31.2
CSS0028855 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 1.5e-42 179.1 496 33.3
Ciclev10011241m.g Citrus clementina HOM05D005724 ORTHO05D006636 2.5e-42 178.3 672 30.1
COL.COLO4_36609 Corchorus olitorius HOM05D005724 ORTHO05D006636 4.3e-42 177.6 658 32.2
Manes.13G004400 Manihot esculenta HOM05D005724 ORTHO05D006636 6.2e-41 173.7 686 30.3
Glyma.15G131100 Glycine max HOM05D005724 ORTHO05D006636 8.1e-41 173.3 683 30.3
Atru.chr12.1744 Acer truncatum HOM05D005724 ORTHO05D006636 1.1e-40 172.9 689 30.6
MCO14G354 Micromonas commoda HOM05D005724 ORTHO05D006636 3.1e-40 171.4 646 33.6
Eucgr.H01410 Eucalyptus grandis HOM05D005724 ORTHO05D006636 4.0e-40 171.0 661 31.0
Gorai.004G263700 Gossypium raimondii HOM05D005724 ORTHO05D006636 5.2e-40 170.6 656 31.6
Nn2g11375 Nelumbo nucifera HOM05D005724 ORTHO05D006636 8.9e-40 169.9 615 35.1
CDE09G0189 Ceratophyllum demersum HOM05D005724 ORTHO05D006636 1.5e-39 169.1 536 36.0
SMO118G0180 Selaginella moellendorffii HOM05D005724 ORTHO05D006636 2.0e-39 168.7 623 32.3
Thecc.05G190100 Theobroma cacao HOM05D005724 ORTHO05D006636 2.0e-39 168.7 689 33.7
Cc10_g09550 Coffea canephora HOM05D005724 ORTHO05D006636 3.4e-39 167.9 648 31.6
Sopen07g032510 Solanum pennellii HOM05D005724 ORTHO05D006636 5.8e-39 167.2 649 31.7
Phvul.006G127600 Phaseolus vulgaris HOM05D005724 ORTHO05D006636 7.6e-39 166.8 650 28.5
CiPaw.07G081600 Carya illinoinensis HOM05D005724 ORTHO05D006636 9.9e-39 166.4 667 29.7
Glyma.09G025000 Glycine max HOM05D005724 ORTHO05D006636 2.9e-38 164.9 684 33.2
Solyc07g064350.3 Solanum lycopersicum HOM05D005724 ORTHO05D006636 4.9e-38 164.1 642 32.9
SalBow2G0175 Salvia bowleyana HOM05D005724 ORTHO05D006636 8.4e-38 163.3 656 34.3
CsaV3_6G006850 Cucumis sativus L. HOM05D005724 ORTHO05D006636 1.4e-37 162.5 636 34.7
Medtr2g030390 Medicago truncatula HOM05D005724 ORTHO05D006636 1.4e-37 162.5 647 29.1
arahy.Tifrunner.gnm1.ann1.EBNE7V Arachis hypogaea HOM05D005724 ORTHO05D006636 1.9e-37 162.2 687 27.5
Zm00001eb227770 Zea mays HOM05D005724 ORTHO05D006636 1.9e-37 162.2 650 33.4
arahy.Tifrunner.gnm1.ann1.GIZW0B Arachis hypogaea HOM05D005724 ORTHO05D006636 3.2e-37 161.4 685 28.0
PRCOL_00003643 Prasinoderma coloniale HOM05D005724 ORTHO05D006636 3.2e-37 161.4 673 29.1
HanXRQChr16g0529541 Helianthus annuus HOM05D005724 ORTHO05D006636 4.2e-37 161.0 665 32.9
Gohir.A08G226800 Gossypium hirsutum HOM05D005724 ORTHO05D006636 1.6e-36 159.1 667 33.0
Aa31LG8G10800 Aethionema arabicum HOM05D005724 ORTHO05D006636 2.7e-36 158.3 615 33.0
Gohir.D08G247200 Gossypium hirsutum HOM05D005724 ORTHO05D006636 4.6e-36 157.5 668 29.9
PGSC0003DMG400013918 Solanum tuberosum HOM05D005724 ORTHO05D006636 4.6e-36 157.5 646 30.7
Nitab4.5_0003319g0010 Nicotiana tabacum HOM05D005724 ORTHO05D006636 6.0e-36 157.1 661 33.6
Carub.0003s2445 Capsella rubella HOM05D005724 ORTHO05D006636 1.7e-35 155.6 668 31.3
HPP92_010851 Vanilla planifolia HOM05D005724 ORTHO05D006636 1.7e-35 155.6 502 32.3
RhsimUnG0095000 Rhododendron simsii HOM05D005724 ORTHO05D006636 2.3e-35 155.2 656 26.7
MELO3C000397.2 Cucumis melo HOM05D005724 ORTHO05D006636 5.1e-35 154.1 544 35.5
PSO541G5859 Papaver somniferum HOM05D005724 ORTHO05D006636 1.1e-34 152.9 417 36.5
Nitab4.5_0000193g0130 Nicotiana tabacum HOM05D005724 ORTHO05D006636 7.3e-34 150.2 671 32.6
Potri.001G125200 Populus trichocarpa HOM05D005724 ORTHO05D006636 1.3e-33 149.4 678 28.6
PSO133G0013 Papaver somniferum HOM05D005724 ORTHO05D006636 2.8e-33 148.3 417 36.2
TPR.G26364 Trifolium pratense HOM05D005724 ORTHO05D006636 2.4e-32 145.2 662 28.9
AL3G39270 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 3.1e-32 144.8 646 31.6
Lj6g0014403 Lotus japonicus HOM05D005724 ORTHO05D006636 3.1e-32 144.8 663 26.8
ECA234G3960 Erigeron canadensis HOM05D005724 ORTHO05D006636 5.3e-32 144.1 628 34.6
Lsat_1_v5_gn_4_15540 Lactuca sativa HOM05D005724 ORTHO05D006636 5.3e-32 144.1 671 25.5
vmacro22819 Vaccinium macrocarpon HOM05D005724 ORTHO05D006636 5.3e-32 144.1 369 31.7
Duzib168G0454 Durio zibethinus HOM05D005724 ORTHO05D006636 6.9e-32 143.7 678 31.1
Nitab4.5_0001290g0080 Nicotiana tabacum HOM05D005724 ORTHO05D006636 1.2e-31 142.9 667 32.4
Oeu026139.1 Olea europaea HOM05D005724 ORTHO05D006636 1.2e-31 142.9 602 32.1
CARHR100150 Cardamine hirsuta HOM05D005724 ORTHO05D006636 2.0e-31 142.1 595 34.1
ClCG09G009940 Citrullus lanatus HOM05D005724 ORTHO05D006636 1.3e-30 139.4 639 33.5
Cfa006250 Carpinus fangiana HOM05D005724 ORTHO05D006636 6.4e-30 137.1 657 28.5
SHI13708 Sapria himalayana HOM05D005724 ORTHO05D006636 1.1e-29 136.3 642 27.1
AL8G20560 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 4.2e-29 134.4 629 31.8
FvH4_6g00350 Fragaria vesca HOM05D005724 ORTHO05D006636 5.4e-29 134.0 681 30.8
AUR62041171 Chenopodium quinoa HOM05D005724 ORTHO05D006636 7.1e-29 133.7 391 36.6
AT3G24080 Arabidopsis thaliana HOM05D005724 ORTHO05D006636 2.7e-28 131.7 660 32.1
CBR_g46717 Chara braunii HOM05D005724 ORTHO05D006636 4.6e-28 131.0 632 35.8
Haze_04583 Corylus avellana HOM05D005724 ORTHO05D006636 8.7e-27 126.7 642 27.9
THA.LOC104821618 Tarenaya hassleriana HOM05D005724 ORTHO05D006636 8.7e-27 126.7 693 30.7
MD12G1263700 Malus domestica HOM05D005724 ORTHO05D006636 4.3e-26 124.4 655 28.7
Lj2C388T1 Lonicera japonica HOM05D005724 ORTHO05D006636 5.6e-26 124.0 628 26.3
AUR62029295 Chenopodium quinoa HOM05D005724 ORTHO05D006636 7.3e-26 123.6 380 34.7
Nitab4.5_0013479g0020 Nicotiana tabacum HOM05D005724 ORTHO05D006636 9.6e-26 123.2 393 32.8
RcHm_v2.0_Chr3g0447651 Rosa chinensis HOM05D005724 ORTHO05D006636 9.6e-26 123.2 688 29.7
BcaB06g26592 Brassica carinata HOM05D005724 ORTHO05D006636 1.3e-25 122.9 478 33.7
QL10p055615 Quercus lobata HOM05D005724 ORTHO05D006636 1.4e-24 119.4 409 29.6
Prupe.6G362700 Prunus persica HOM05D005724 ORTHO05D006636 2.4e-24 118.6 651 28.6
QL10p055704 Quercus lobata HOM05D005724 ORTHO05D006636 1.5e-23 115.9 377 29.4
BolC7t41765H Brassica oleracea HOM05D005724 ORTHO05D006636 5.8e-23 114.0 478 36.4
BcaC06g35627 Brassica carinata HOM05D005724 ORTHO05D006636 4.9e-22 110.9 476 36.1
Cfa025790 Carpinus fangiana HOM05D005724 ORTHO05D006636 1.9e-21 109.0 667 26.7
Sp3g21860 Schrenkiella parvula HOM05D005724 ORTHO05D006636 3.2e-21 108.2 304 38.2
C07p12790 Brassica napus HOM05D005724 ORTHO05D006636 4.2e-21 107.8 477 36.1
A07p08250 Brassica napus HOM05D005724 ORTHO05D006636 4.6e-20 104.4 477 35.8
QL03p046485 Quercus lobata HOM05D005724 ORTHO05D006636 4.6e-20 104.4 682 27.3
BraA07t28608Z Brassica rapa HOM05D005724 ORTHO05D006636 1.0e-19 103.2 474 35.9
CSS0001117 Camellia sinensis var. sinensis HOM05D005724 ORTHO05D006636 1.8e-19 102.4 231 34.2
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 6.2e-17 94.0 476 28.4
Nitab4.5_0005621g0050 Nicotiana tabacum HOM05D005724 ORTHO05D006636 5.3e-16 90.9 271 29.5
Dinv27342 Davidia involucrata HOM05D005724 ORTHO05D006636 5.8e-15 87.4 368 31.8
Glyma.13G144202 Glycine max HOM05D005724 ORTHO05D006636 1.7e-14 85.9 249 32.5
Cpa.g.sc48.98 Carica papaya HOM05D005724 ORTHO05D006636 8.4e-14 83.6 200 39.5
Peaxi162Scf00916g00131 Petunia axillaris HOM05D005724 ORTHO05D006636 1.2e-12 79.7 86 46.5
Dinv27343 Davidia involucrata HOM05D005724 ORTHO05D006636 1.6e-12 79.3 102 40.2
Peaxi162Scf00916g00115 Petunia axillaris HOM05D005724 ORTHO05D006636 2.3e-11 75.5 423 31.0
AL8G20410 Arabidopsis lyrata HOM05D005724 ORTHO05D006636 3.3e-10 71.6 95 40.0
MSTRG.22873 Avicennia marina HOM05D005724 ORTHO05D006636 4.0e-08 64.7 184 27.7
AagrBONN_evm.TU.Sc2ySwM_344.5238 Anthoceros agrestis HOM05D005724 ORTHO05D006636 6.5e-06 57.4 575 25.0


User provided reference genes

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