Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 8.3e-76 287.0 145 100.0
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 2.0e-37 159.5 130 59.2
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 5.8e-37 157.9 141 56.0
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 3.8e-36 155.2 116 57.8
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 6.4e-36 154.5 141 56.0
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 8.4e-36 154.1 143 55.2
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 3.2e-35 152.1 109 65.1
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 4.2e-35 151.8 138 55.8
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 5.4e-35 151.4 108 63.0
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 5.4e-35 151.4 114 63.2
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 9.3e-35 150.6 109 65.1
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 9.3e-35 150.6 140 53.6
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 9.3e-35 150.6 108 62.0
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 9.3e-35 150.6 109 63.3
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 1.2e-34 150.2 110 61.8
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.6e-34 149.8 119 58.8
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 1.6e-34 149.8 109 62.4
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 1.6e-34 149.8 136 54.4
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 2.1e-34 149.4 109 61.5
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 2.1e-34 149.4 109 61.5
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 2.1e-34 149.4 108 62.0
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 2.1e-34 149.4 109 63.3
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 2.7e-34 149.1 108 63.0
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 2.7e-34 149.1 135 54.8
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 3.5e-34 148.7 138 52.2
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 3.5e-34 148.7 119 58.0
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 3.5e-34 148.7 109 59.6
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 3.5e-34 148.7 109 62.4
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 4.6e-34 148.3 108 63.0
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 4.6e-34 148.3 108 63.0
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 4.6e-34 148.3 109 62.4
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 4.6e-34 148.3 108 62.0
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 4.6e-34 148.3 108 62.0
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 4.6e-34 148.3 108 62.0
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 4.6e-34 148.3 108 61.1
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 6.0e-34 147.9 109 61.5
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 6.0e-34 147.9 108 62.0
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 6.0e-34 147.9 108 62.0
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 6.0e-34 147.9 109 61.5
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 6.0e-34 147.9 108 61.1
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 6.0e-34 147.9 108 62.0
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 7.9e-34 147.5 132 53.8
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 7.9e-34 147.5 120 58.3
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 7.9e-34 147.5 108 61.1
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 7.9e-34 147.5 108 62.0
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 1.0e-33 147.1 149 50.3
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 1.0e-33 147.1 109 60.6
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 1.0e-33 147.1 152 49.3
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 1.0e-33 147.1 144 52.1
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 1.3e-33 146.7 109 61.5
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 1.3e-33 146.7 108 61.1
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 1.3e-33 146.7 109 60.6
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 1.3e-33 146.7 109 60.6
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 1.3e-33 146.7 109 61.5
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 1.8e-33 146.4 109 60.6
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 1.8e-33 146.4 109 60.6
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 2.3e-33 146.0 108 60.2
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 2.3e-33 146.0 109 59.6
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 2.3e-33 146.0 140 50.7
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 2.3e-33 146.0 109 60.6
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 2.3e-33 146.0 109 61.5
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 3.0e-33 145.6 109 59.6
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 3.0e-33 145.6 109 60.6
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 3.0e-33 145.6 109 59.6
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 3.0e-33 145.6 108 61.1
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 3.0e-33 145.6 108 61.1
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 3.0e-33 145.6 108 60.2
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 3.0e-33 145.6 140 50.7
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 3.0e-33 145.6 108 60.2
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 3.0e-33 145.6 115 60.0
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 3.0e-33 145.6 108 60.2
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 3.0e-33 145.6 108 60.2
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 3.0e-33 145.6 108 60.2
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 3.9e-33 145.2 119 55.5
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 3.9e-33 145.2 109 59.6
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 3.9e-33 145.2 109 59.6
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 3.9e-33 145.2 138 51.4
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 3.9e-33 145.2 109 59.6
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 3.9e-33 145.2 109 60.6
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 3.9e-33 145.2 109 60.6
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 3.9e-33 145.2 138 53.6
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 5.1e-33 144.8 119 55.5
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 5.1e-33 144.8 109 58.7
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 5.1e-33 144.8 120 55.0
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 5.1e-33 144.8 109 58.7
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 6.7e-33 144.4 108 60.2
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 6.7e-33 144.4 109 58.7
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 6.7e-33 144.4 109 58.7
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 6.7e-33 144.4 109 58.7
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 6.7e-33 144.4 109 58.7
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 6.7e-33 144.4 109 58.7
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 6.7e-33 144.4 120 56.7
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 6.7e-33 144.4 108 61.1
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 6.7e-33 144.4 121 56.2
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 6.7e-33 144.4 108 59.3
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 6.7e-33 144.4 109 59.6
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 6.7e-33 144.4 109 60.6
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 8.7e-33 144.1 109 58.7
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 8.7e-33 144.1 108 59.3
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 8.7e-33 144.1 109 59.6
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 8.7e-33 144.1 109 57.8
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 1.1e-32 143.7 109 57.8
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 1.1e-32 143.7 109 57.8
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 1.5e-32 143.3 109 59.6
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.5e-32 142.5 108 59.3
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 3.3e-32 142.1 113 59.3
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 3.3e-32 142.1 108 59.3
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 4.3e-32 141.7 108 58.3
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 4.3e-32 141.7 108 59.3
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 4.3e-32 141.7 109 57.8
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 4.3e-32 141.7 108 58.3
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 7.4e-32 141.0 104 58.7
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 7.4e-32 141.0 107 59.8
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 9.6e-32 140.6 108 56.5
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 1.6e-31 139.8 133 51.1
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 2.8e-31 139.0 108 57.4
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 4.8e-31 138.3 148 48.6
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 6.2e-31 137.9 98 63.3
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.1e-30 137.1 108 57.4
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 9.0e-30 134.0 97 61.9
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 1.8e-22 109.8 104 52.9
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 1.9e-16 89.7 127 41.7
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 4.5e-13 78.6 57 61.4
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 4.5e-13 78.6 57 61.4
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.8e-09 66.6 110 34.5
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.3e-09 66.2 82 47.6
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 3.0e-09 65.9 69 47.8


User provided reference genes

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