Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 2.3e-155 552.4 320 100.0
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 5.4e-19 99.4 217 32.7
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 4.3e-16 89.7 237 30.0
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 6.2e-15 85.9 215 29.3
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 8.1e-15 85.5 211 30.8
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 2.4e-14 84.0 234 29.5
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 1.2e-13 81.6 214 29.4
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 1.5e-13 81.3 213 30.5
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.5e-13 81.3 212 29.2
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 2.0e-13 80.9 230 29.6
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 2.0e-13 80.9 216 28.7
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 2.6e-13 80.5 231 29.9
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 2.6e-13 80.5 235 30.6
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 4.4e-13 79.7 215 27.0
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 4.4e-13 79.7 213 29.6
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 5.8e-13 79.3 224 29.0
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 7.6e-13 79.0 208 29.8
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 9.9e-13 78.6 231 28.6
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.3e-12 78.2 211 28.9
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 1.3e-12 78.2 235 27.2
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 1.7e-12 77.8 218 28.4
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 1.7e-12 77.8 217 26.3
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 2.2e-12 77.4 230 29.1
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 2.2e-12 77.4 211 28.9
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 2.9e-12 77.0 236 27.5
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 2.9e-12 77.0 211 29.4
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 3.8e-12 76.6 232 26.7
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 3.8e-12 76.6 220 29.1
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 3.8e-12 76.6 232 27.2
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 4.9e-12 76.3 221 27.6
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 4.9e-12 76.3 217 28.1
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 8.4e-12 75.5 214 28.0
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 1.1e-11 75.1 212 28.8
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 1.1e-11 75.1 223 27.4
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 1.4e-11 74.7 250 27.2
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 3.2e-11 73.6 213 27.2
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 7.1e-11 72.4 214 27.6
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 1.6e-10 71.2 211 27.5
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 2.1e-10 70.9 162 29.6
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 3.5e-10 70.1 210 29.5
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 7.8e-10 68.9 200 26.5
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 1.0e-09 68.6 217 28.1
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 1.0e-09 68.6 211 28.4
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 1.3e-09 68.2 214 28.0
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 8.7e-09 65.5 244 27.0
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 8.7e-09 65.5 219 26.5
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 1.5e-08 64.7 170 26.5
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 1.5e-08 64.7 129 33.3
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 4.3e-08 63.2 190 26.3
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 4.3e-08 63.2 141 32.6
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 5.6e-08 62.8 116 36.2
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 2.1e-07 60.8 201 27.9
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 3.6e-07 60.1 107 38.3
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 1.1e-06 58.5 148 31.8


User provided reference genes

Program Settings