Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre09.g407100 Chlamydomonas reinhardtii HOM05D004851 ORTHO05D006091 3.3e-182 641.7 358 100.0
MCO11G545 Micromonas commoda HOM05D004851 ORTHO05D006091 4.2e-12 76.6 153 28.8
SEGI_25717 Sequoiadendron giganteum HOM05D004851 ORTHO05D006091 4.2e-12 76.6 171 29.8
Phvul.009G105500 Phaseolus vulgaris HOM05D004851 ORTHO05D006091 2.7e-11 73.9 171 28.1
HPP92_005346 Vanilla planifolia HOM05D004851 ORTHO05D006091 3.6e-11 73.6 172 29.7
Glyma.04G079800 Glycine max HOM05D004851 ORTHO05D006091 7.9e-11 72.4 171 28.1
Glyma.06G081400 Glycine max HOM05D004851 ORTHO05D006091 7.9e-11 72.4 171 28.1
AUR62028634 Chenopodium quinoa HOM05D004851 ORTHO05D006091 2.3e-10 70.9 171 26.3
Lj3g0009966 Lotus japonicus HOM05D004851 ORTHO05D006091 2.3e-10 70.9 171 26.9
THA.LOC104823793 Tarenaya hassleriana HOM05D004851 ORTHO05D006091 2.3e-10 70.9 171 24.6
Ciclev10031158m.g Citrus clementina HOM05D004851 ORTHO05D006091 3.0e-10 70.5 171 26.9
arahy.Tifrunner.gnm1.ann1.NF9HU2 Arachis hypogaea HOM05D004851 ORTHO05D006091 3.9e-10 70.1 181 27.1
arahy.Tifrunner.gnm1.ann1.VYGS4N Arachis hypogaea HOM05D004851 ORTHO05D006091 3.9e-10 70.1 181 27.1
Cfa025590 Carpinus fangiana HOM05D004851 ORTHO05D006091 3.9e-10 70.1 146 25.3
AUR62008058 Chenopodium quinoa HOM05D004851 ORTHO05D006091 3.9e-10 70.1 171 25.7
Actinidia08788 Actinidia chinensis HOM05D004851 ORTHO05D006091 5.1e-10 69.7 171 27.5
CSS0035891 Camellia sinensis var. sinensis HOM05D004851 ORTHO05D006091 5.1e-10 69.7 171 27.5
Gohir.A13G158200 Gossypium hirsutum HOM05D004851 ORTHO05D006091 5.1e-10 69.7 169 27.2
LjContig00389g0015553 Lotus japonicus HOM05D004851 ORTHO05D006091 5.1e-10 69.7 171 26.3
Nitab4.5_0001003g0170 Nicotiana tabacum HOM05D004851 ORTHO05D006091 5.1e-10 69.7 171 27.5
arahy.Tifrunner.gnm1.ann1.UCI1EL Arachis hypogaea HOM05D004851 ORTHO05D006091 6.7e-10 69.3 171 26.9
Cfa016106 Carpinus fangiana HOM05D004851 ORTHO05D006091 6.7e-10 69.3 171 26.3
Nitab4.5_0005243g0030 Nicotiana tabacum HOM05D004851 ORTHO05D006091 6.7e-10 69.3 171 27.5
VMungo0540G0464 Vigna mungo HOM05D004851 ORTHO05D006091 6.7e-10 69.3 171 26.9
Aqoxy2G03682 Aquilegia oxysepala HOM05D004851 ORTHO05D006091 8.8e-10 68.9 166 28.3
DCAR_008779 Daucus carota HOM05D004851 ORTHO05D006091 8.8e-10 68.9 171 26.9
Sc17g0001530 Simmondsia chinensis HOM05D004851 ORTHO05D006091 8.8e-10 68.9 171 26.9
GSVIVG01020716001 Vitis vinifera HOM05D004851 ORTHO05D006091 8.8e-10 68.9 171 27.5
arahy.Tifrunner.gnm1.ann1.BXG275 Arachis hypogaea HOM05D004851 ORTHO05D006091 1.1e-09 68.6 171 26.3
CAN.G691.8 Capsicum annuum HOM05D004851 ORTHO05D006091 1.1e-09 68.6 171 26.9
Lalb_Chr01g0022101 Lupinus albus HOM05D004851 ORTHO05D006091 1.1e-09 68.6 171 26.9
Duzib106G1281 Durio zibethinus HOM05D004851 ORTHO05D006091 1.5e-09 68.2 171 25.1
Duzib128G1329 Durio zibethinus HOM05D004851 ORTHO05D006091 1.5e-09 68.2 171 25.7
TAR628G1149 Trochodendron aralioides HOM05D004851 ORTHO05D006091 1.5e-09 68.2 171 27.5
CiPaw.06G036900 Carya illinoinensis HOM05D004851 ORTHO05D006091 2.0e-09 67.8 171 25.7
Medtr8g093680 Medicago truncatula HOM05D004851 ORTHO05D006091 2.0e-09 67.8 171 26.3
Nn4g24557 Nelumbo nucifera HOM05D004851 ORTHO05D006091 2.0e-09 67.8 171 26.9
SalBow1G5096 Salvia bowleyana HOM05D004851 ORTHO05D006091 2.0e-09 67.8 158 29.1
Dinv29371 Davidia involucrata HOM05D004851 ORTHO05D006091 2.6e-09 67.4 171 26.3
Gohir.D13G162900 Gossypium hirsutum HOM05D004851 ORTHO05D006091 2.6e-09 67.4 169 26.6
MBI07_g19429_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 2.6e-09 67.4 171 26.9
MBI10_g03402_MAGBIO Magnolia biondii HOM05D004851 ORTHO05D006091 2.6e-09 67.4 171 26.9
Peaxi162Scf00254g00512 Petunia axillaris HOM05D004851 ORTHO05D006091 2.6e-09 67.4 171 26.3
TPR.G37402 Trifolium pratense HOM05D004851 ORTHO05D006091 2.6e-09 67.4 171 25.7
Eucgr.A00913 Eucalyptus grandis HOM05D004851 ORTHO05D006091 3.3e-09 67.0 171 26.9
Rhsim03G0240200 Rhododendron simsii HOM05D004851 ORTHO05D006091 3.3e-09 67.0 171 26.3
COL.COLO4_12970 Corchorus olitorius HOM05D004851 ORTHO05D006091 4.4e-09 66.6 166 26.5
Sabra13G0065400 Salix brachista HOM05D004851 ORTHO05D006091 5.7e-09 66.2 169 26.6
Thecc.05G226800 Theobroma cacao HOM05D004851 ORTHO05D006091 5.7e-09 66.2 166 26.5
MSTRG.27417 Avicennia marina HOM05D004851 ORTHO05D006091 7.4e-09 65.9 166 26.5
Lj3A883T54 Lonicera japonica HOM05D004851 ORTHO05D006091 7.4e-09 65.9 171 26.9
Psat7g046360 Pisum sativum HOM05D004851 ORTHO05D006091 7.4e-09 65.9 171 25.7
SGA_v2.0_scaffold75G25015 Striga asiatica HOM05D004851 ORTHO05D006091 7.4e-09 65.9 161 27.3
CsaV3_2G035950 Cucumis sativus L. HOM05D004851 ORTHO05D006091 9.7e-09 65.5 171 26.3
Potri.013G076200 Populus trichocarpa HOM05D004851 ORTHO05D006091 9.7e-09 65.5 169 26.0
MELO3C024747.2 Cucumis melo HOM05D004851 ORTHO05D006091 1.3e-08 65.1 171 25.7
Hma1.2p1_2196F.1_g316860 Hydrangea macrophylla HOM05D004851 ORTHO05D006091 1.3e-08 65.1 171 26.3
Manes.08G159500 Manihot esculenta HOM05D004851 ORTHO05D006091 1.3e-08 65.1 171 25.1
Oeu010173.1 Olea europaea HOM05D004851 ORTHO05D006091 1.3e-08 65.1 158 27.8
PGR031G1011 Punica granatum HOM05D004851 ORTHO05D006091 1.3e-08 65.1 166 26.5
Solyc11g008710.2 Solanum lycopersicum HOM05D004851 ORTHO05D006091 1.3e-08 65.1 171 26.3
Sopen11g004490 Solanum pennellii HOM05D004851 ORTHO05D006091 1.3e-08 65.1 171 26.3
PGSC0003DMG402016246 Solanum tuberosum HOM05D004851 ORTHO05D006091 1.3e-08 65.1 171 26.3
Cc09_g04170 Coffea canephora HOM05D004851 ORTHO05D006091 1.7e-08 64.7 166 27.1
vmacro07474 Vaccinium macrocarpon HOM05D004851 ORTHO05D006091 1.7e-08 64.7 158 26.6
Ca_17637_v3 Cicer arietinum L. HOM05D004851 ORTHO05D006091 2.2e-08 64.3 171 25.1
unitig_736.g22500 Utricularia gibba HOM05D004851 ORTHO05D006091 2.8e-08 63.9 158 26.6
EL10Ac5g10580 Beta vulgaris HOM05D004851 ORTHO05D006091 4.8e-08 63.2 171 26.3
Gorai.013G185100 Gossypium raimondii HOM05D004851 ORTHO05D006091 8.2e-08 62.4 147 25.9
Os02g0102400 Oryza sativa ssp. japonica HOM05D004851 ORTHO05D006091 1.4e-07 61.6 172 26.2
Atru.chr11.646 Acer truncatum HOM05D004851 ORTHO05D006091 4.1e-07 60.1 139 27.3
PRCOL_00002029 Prasinoderma coloniale HOM05D004851 ORTHO05D006091 4.1e-07 60.1 155 24.5
Hma1.2p1_2196F.1_g316870 Hydrangea macrophylla HOM05D004851 ORTHO05D006091 5.3e-07 59.7 153 26.1
MD06G1015700 Malus domestica HOM05D004851 ORTHO05D006091 2.6e-06 57.4 136 24.3
Zm00001eb229290 Zea mays HOM05D004851 ORTHO05D006091 7.7e-06 55.8 133 27.1


User provided reference genes

Program Settings