Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre09.g405550 Chlamydomonas reinhardtii HOM05D005527 ORTHO05D006480 5.2e-140 501.1 271 100.0
AUR62022137 Chenopodium quinoa HOM05D005527 ORTHO05D006480 1.4e-31 141.0 218 37.6
AUR62001190 Chenopodium quinoa HOM05D005527 ORTHO05D006480 2.3e-31 140.2 218 37.6
Potri.014G054400 Populus trichocarpa HOM05D005527 ORTHO05D006480 8.9e-31 138.3 161 44.1
Sabra14G0040300 Salix brachista HOM05D005527 ORTHO05D006480 8.9e-31 138.3 161 44.1
EL10Ac7g17978 Beta vulgaris HOM05D005527 ORTHO05D006480 3.4e-30 136.3 202 38.1
Pp3c2_16760 Physcomitrium patens HOM05D005527 ORTHO05D006480 4.4e-30 136.0 163 45.4
unitig_0.g2761 Utricularia gibba HOM05D005527 ORTHO05D006480 4.4e-30 136.0 166 42.2
Cpa.g.sc5.224 Carica papaya HOM05D005527 ORTHO05D006480 5.8e-30 135.6 145 48.3
Potri.002G140700 Populus trichocarpa HOM05D005527 ORTHO05D006480 7.5e-30 135.2 190 40.0
Thecc.01G389600 Theobroma cacao HOM05D005527 ORTHO05D006480 7.5e-30 135.2 152 47.4
TWI59G1399 Tripterygium wilfordii HOM05D005527 ORTHO05D006480 9.9e-30 134.8 141 48.9
Duzib138G0956 Durio zibethinus HOM05D005527 ORTHO05D006480 1.3e-29 134.4 156 44.9
Mapoly0168s0006 Marchantia polymorpha HOM05D005527 ORTHO05D006480 1.3e-29 134.4 220 38.6
Actinidia40393 Actinidia chinensis HOM05D005527 ORTHO05D006480 1.7e-29 134.0 168 42.9
Cfa016649 Carpinus fangiana HOM05D002184 ORTHO05D006480 2.9e-29 133.3 149 44.3
Manes.05G052500 Manihot esculenta HOM05D005527 ORTHO05D006480 2.9e-29 133.3 144 47.2
CiPaw.03G272900 Carya illinoinensis HOM05D005527 ORTHO05D006480 4.9e-29 132.5 149 45.6
Duzib133G0823 Durio zibethinus HOM05D005527 ORTHO05D006480 4.9e-29 132.5 152 45.4
Gohir.A08G059500 Gossypium hirsutum HOM05D005527 ORTHO05D006480 4.9e-29 132.5 156 44.2
Gohir.D08G068700 Gossypium hirsutum HOM05D005527 ORTHO05D006480 4.9e-29 132.5 156 44.2
Gorai.004G072000 Gossypium raimondii HOM05D005527 ORTHO05D006480 4.9e-29 132.5 156 44.2
Lj5g0022618 Lotus japonicus HOM05D005527 ORTHO05D006480 6.4e-29 132.1 147 44.9
Sabra02G0109800 Salix brachista HOM05D005527 ORTHO05D006480 6.4e-29 132.1 159 43.4
SHI13602 Sapria himalayana HOM05D005527 ORTHO05D006480 8.3e-29 131.7 138 44.9
Actinidia12159 Actinidia chinensis HOM05D005527 ORTHO05D006480 1.1e-28 131.3 152 44.1
COL.COLO4_12437 Corchorus olitorius HOM05D005527 ORTHO05D006480 1.1e-28 131.3 150 43.3
SMO201G0136 Selaginella moellendorffii HOM05D005527 ORTHO05D006480 1.1e-28 131.3 152 42.8
Ah.08g218760 Amaranthus hybridus HOM05D005527 ORTHO05D006480 1.4e-28 131.0 216 36.1
Nn6g33862 Nelumbo nucifera HOM05D005527 ORTHO05D006480 1.4e-28 131.0 156 42.9
QL09p042955 Quercus lobata HOM05D005527 ORTHO05D006480 1.4e-28 131.0 157 43.3
Zm00001eb010980 Zea mays HOM05D005527 ORTHO05D006480 1.4e-28 131.0 157 42.0
RcHm_v2.0_Chr6g0285911 Rosa chinensis HOM05D005527 ORTHO05D006480 1.9e-28 130.6 140 43.6
Psat6g111240 Pisum sativum HOM05D005527 ORTHO05D006480 2.4e-28 130.2 164 42.1
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 3.2e-28 129.8 152 44.1
Lalb_Chr21g0311731 Lupinus albus HOM05D005527 ORTHO05D006480 3.2e-28 129.8 161 40.4
FvH4_7g06430 Fragaria vesca HOM05D005527 ORTHO05D006480 4.1e-28 129.4 140 45.0
FAN01G2831 Fragaria x ananassa HOM05D005527 ORTHO05D006480 4.1e-28 129.4 140 45.0
FAN06G1845 Fragaria x ananassa HOM05D004480 ORTHO05D005546 4.1e-28 129.4 140 45.0
FAN10G1488 Fragaria x ananassa HOM05D004480 ORTHO05D005546 4.1e-28 129.4 140 45.0
Hma1.2p1_1740F.1_g300050 Hydrangea macrophylla HOM05D005527 ORTHO05D006480 4.1e-28 129.4 149 43.6
HPP92_021019 Vanilla planifolia HOM05D005527 ORTHO05D006480 4.1e-28 129.4 141 45.4
AT4G00026 Arabidopsis thaliana HOM05D005527 ORTHO05D006480 5.4e-28 129.0 167 40.1
Ca_09921_v3 Cicer arietinum L. HOM05D005527 ORTHO05D006480 5.4e-28 129.0 157 43.3
Prupe.8G211200 Prunus persica HOM05D005527 ORTHO05D006480 5.4e-28 129.0 156 42.9
CARHR248050 Cardamine hirsuta HOM05D005527 ORTHO05D006480 7.1e-28 128.6 167 39.5
VMungo0720G0088 Vigna mungo HOM05D005527 ORTHO05D006480 7.1e-28 128.6 162 41.4
AL6G53490 Arabidopsis lyrata HOM05D005527 ORTHO05D006480 9.2e-28 128.3 167 40.1
Carub.0006s3720 Capsella rubella HOM05D005527 ORTHO05D006480 9.2e-28 128.3 166 39.8
Glyma.20G215800 Glycine max HOM05D005527 ORTHO05D006480 1.2e-27 127.9 144 44.4
Medtr1g077430 Medicago truncatula HOM05D005527 ORTHO05D006480 1.2e-27 127.9 147 43.5
CANSAT01G0875 Cannabis sativa HOM05D005527 ORTHO05D006480 1.6e-27 127.5 149 42.3
CANSAT01G3075 Cannabis sativa HOM05D005527 ORTHO05D006480 1.6e-27 127.5 149 42.3
Thhalv10028875m.g Eutrema salsugineum HOM05D005527 ORTHO05D006480 2.1e-27 127.1 167 39.5
Glyma.10G175000 Glycine max HOM05D005527 ORTHO05D006480 2.1e-27 127.1 144 45.1
MSTRG.4922 Avicennia marina HOM05D005527 ORTHO05D006480 2.7e-27 126.7 156 39.7
CDE11G0157 Ceratophyllum demersum HOM05D005527 ORTHO05D006480 2.7e-27 126.7 156 40.4
Ciclev10021461m.g Citrus clementina HOM05D005527 ORTHO05D006480 2.7e-27 126.7 149 42.3
arahy.Tifrunner.gnm1.ann1.TVCQ13 Arachis hypogaea HOM05D005527 ORTHO05D006480 3.5e-27 126.3 145 45.5
DCAR_025077 Daucus carota HOM05D005527 ORTHO05D006480 3.5e-27 126.3 149 40.3
CBR_g6321 Chara braunii HOM05D005527 ORTHO05D000048 4.6e-27 125.9 149 40.3
PSO063G6553 Papaver somniferum HOM05D005527 ORTHO05D006480 6.0e-27 125.6 160 40.6
vmacro21047 Vaccinium macrocarpon HOM05D005527 ORTHO05D006480 6.0e-27 125.6 152 41.4
arahy.Tifrunner.gnm1.ann1.PVA962 Arachis hypogaea HOM05D005527 ORTHO05D006480 7.8e-27 125.2 166 41.0
Dinv43641 Davidia involucrata HOM05D005527 ORTHO05D006480 7.8e-27 125.2 156 40.4
MD05G1185000 Malus domestica HOM05D005527 ORTHO05D006480 7.8e-27 125.2 152 42.1
Phvul.L007001 Phaseolus vulgaris HOM05D005527 ORTHO05D006480 7.8e-27 125.2 152 41.4
SalBow5G2512 Salvia bowleyana HOM05D005527 ORTHO05D006480 7.8e-27 125.2 158 41.1
SalBow5G5418 Salvia bowleyana HOM05D005527 ORTHO05D006480 7.8e-27 125.2 158 41.1
Solyc08g081430.3 Solanum lycopersicum HOM05D005527 ORTHO05D006480 7.8e-27 125.2 163 39.9
THA.LOC104814072 Tarenaya hassleriana HOM05D005527 ORTHO05D006480 7.8e-27 125.2 145 42.8
Cc00_g20470 Coffea canephora HOM05D005527 ORTHO05D006480 1.0e-26 124.8 148 43.9
vmacro13481 Vaccinium macrocarpon HOM05D005527 ORTHO05D006480 1.0e-26 124.8 149 41.6
AagrBONN_evm.TU.Sc2ySwM_117.1379 Anthoceros agrestis HOM05D005527 ORTHO05D006480 1.3e-26 124.4 145 41.4
Nitab4.5_0001818g0050 Nicotiana tabacum HOM05D005527 ORTHO05D006480 1.3e-26 124.4 163 38.7
Nitab4.5_0002874g0100 Nicotiana tabacum HOM05D005527 ORTHO05D006480 1.3e-26 124.4 163 38.7
Sopen08g029750 Solanum pennellii HOM05D005527 ORTHO05D006480 1.3e-26 124.4 163 39.3
ATR0767G019 Amborella trichopoda HOM05D005527 ORTHO05D006480 1.7e-26 124.0 141 44.7
CAN.G532.17 Capsicum annuum HOM05D005527 ORTHO05D006480 1.7e-26 124.0 156 40.4
Peaxi162Scf00392g00124 Petunia axillaris HOM05D005527 ORTHO05D006480 1.7e-26 124.0 156 39.7
Eucgr.D01510 Eucalyptus grandis HOM05D005527 ORTHO05D006480 2.3e-26 123.6 152 42.1
Lsat_1_v5_gn_3_129561 Lactuca sativa HOM05D005527 ORTHO05D006480 2.3e-26 123.6 150 41.3
MD10G1173000 Malus domestica HOM05D005527 ORTHO05D006480 2.3e-26 123.6 144 41.7
ECA240G4071 Erigeron canadensis HOM05D005527 ORTHO05D006480 3.0e-26 123.2 145 41.4
Migut.N01756 Erythranthe guttata HOM05D005527 ORTHO05D006480 3.0e-26 123.2 156 39.7
SGA_v2.0_scaffold116G32305 Striga asiatica HOM05D005527 ORTHO05D006480 3.0e-26 123.2 152 41.4
BolC9t52939H Brassica oleracea HOM05D005527 ORTHO05D006480 5.1e-26 122.5 167 39.5
CSS0037426 Camellia sinensis var. sinensis HOM05D005527 ORTHO05D006480 5.1e-26 122.5 166 39.8
Oeu063991.1 Olea europaea HOM05D005527 ORTHO05D006480 5.1e-26 122.5 145 42.8
PGSC0003DMG401012327 Solanum tuberosum HOM05D005527 ORTHO05D006480 6.6e-26 122.1 163 38.7
MELO3C019920.2 Cucumis melo HOM05D005527 ORTHO05D006480 1.1e-25 121.3 166 39.2
CsaV3_6G004490 Cucumis sativus L. HOM05D005527 ORTHO05D006480 1.1e-25 121.3 166 39.2
PGR004G2692 Punica granatum HOM05D005527 ORTHO05D006480 1.1e-25 121.3 213 35.7
GSVIVG01022807001 Vitis vinifera HOM05D005527 ORTHO05D006480 1.1e-25 121.3 163 39.3
SGA_v2.0_scaffold44G16622 Striga asiatica HOM05D005527 ORTHO05D006480 1.5e-25 120.9 149 42.3
C09p00040 Brassica napus HOM05D005527 ORTHO05D006480 2.5e-25 120.2 167 38.9
BraA09t35678Z Brassica rapa HOM05D005527 ORTHO05D006480 2.5e-25 120.2 167 38.9
Lalb_Chr02g0149681 Lupinus albus HOM05D005527 ORTHO05D006480 2.5e-25 120.2 162 38.9
TPR.G8872 Trifolium pratense HOM05D005527 ORTHO05D006480 2.5e-25 120.2 164 39.0
BcaB01g02205 Brassica carinata HOM05D005527 ORTHO05D006480 4.3e-25 119.4 152 40.1
Rhsim07G0034300 Rhododendron simsii HOM05D005527 ORTHO05D006480 4.3e-25 119.4 152 40.1
BcaB01g02184 Brassica carinata HOM05D005527 ORTHO05D006480 5.6e-25 119.0 166 37.3
TAR375G0575 Trochodendron aralioides HOM05D005527 ORTHO05D006480 5.6e-25 119.0 156 41.0
Sed0026275 Sechium edule HOM05D005527 ORTHO05D006480 1.2e-24 117.9 149 39.6
C08p29870 Brassica napus HOM05D005527 ORTHO05D006480 2.1e-24 117.1 160 37.5
Lju41A43T28 Lonicera japonica HOM05D005527 ORTHO05D006480 2.8e-24 116.7 145 40.7
FAN03G2170 Fragaria x ananassa HOM05D005527 ORTHO05D006480 4.7e-24 115.9 162 38.3
A09p47660 Brassica napus HOM05D005527 ORTHO05D006480 1.4e-23 114.4 161 36.0
MCO09G641 Micromonas commoda HOM05D005527 ORTHO05D006480 1.4e-23 114.4 134 43.3
BraA09t40222Z Brassica rapa HOM05D005527 ORTHO05D006480 4.0e-23 112.8 161 36.0
Sp6g00070 Schrenkiella parvula HOM05D005527 ORTHO05D006480 1.2e-22 111.3 145 37.9
Aa31LG5G80 Aethionema arabicum HOM05D005527 ORTHO05D006480 2.0e-22 110.5 152 38.2
Aqoxy3G02804 Aquilegia oxysepala HOM05D000030 ORTHO05D000023 5.8e-22 109.0 142 40.8
PRCOL_00001529 Prasinoderma coloniale HOM05D005527 ORTHO05D006480 5.4e-20 102.4 149 36.9
Dinv44079 Davidia involucrata HOM05D005527 ORTHO05D006480 1.2e-19 101.3 157 37.6
Nn1g00907 Nelumbo nucifera HOM05D005527 ORTHO05D006480 2.1e-19 100.5 125 40.8
Rhsim01G0137400 Rhododendron simsii HOM05D005527 ORTHO05D006480 2.7e-19 100.1 205 30.2
Hund14311 Selenicereus undatus HOM05D005527 ORTHO05D006480 6.0e-19 99.0 169 35.5
BolC8t50598H Brassica oleracea HOM05D005527 ORTHO05D006480 7.8e-19 98.6 132 37.9
ClCG08G008500 Citrullus lanatus HOM05D005527 ORTHO05D006480 7.8e-19 98.6 170 34.7
Oeu018737.2 Olea europaea HOM05D005527 ORTHO05D006480 7.8e-19 98.6 203 30.5
DCAR_025031 Daucus carota HOM05D005527 ORTHO05D006480 5.1e-18 95.9 117 41.0
HanXRQChr13g0422791 Helianthus annuus HOM05D005527 ORTHO05D006480 1.2e-16 91.3 109 43.1
CSS0049638 Camellia sinensis var. sinensis HOM05D005527 ORTHO05D006480 1.1e-15 88.2 97 42.3
BcaC07g39791 Brassica carinata HOM05D005527 ORTHO05D006480 2.4e-15 87.0 147 36.1
SEGI_20492 Sequoiadendron giganteum HOM05D005527 ORTHO05D006480 2.0e-14 84.0 90 44.4
BcaB02g08455 Brassica carinata HOM05D005527 ORTHO05D006480 9.9e-14 81.6 147 35.4
Oeu018739.1 Olea europaea HOM05D005527 ORTHO05D006480 2.7e-11 73.6 84 42.9
Haze_19655 Corylus avellana HOM05D002184 ORTHO05D002379 3.0e-10 70.1 74 44.6
FAN23G2762 Fragaria x ananassa HOM05D005527 ORTHO05D006480 8.7e-10 68.6 90 36.7
FAN19G1210 Fragaria x ananassa HOM05D005527 ORTHO05D006480 7.3e-09 65.5 157 30.6


User provided reference genes

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