Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 1.0e-253 880.2 664 100.0
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 1.2e-12 79.3 138 37.7
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 1.6e-12 79.0 138 39.1
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 2.7e-12 78.2 139 37.4
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 4.6e-12 77.4 141 35.5
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 6.0e-12 77.0 139 35.3
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 7.8e-12 76.6 139 34.5
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 7.8e-12 76.6 140 35.0
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 1.0e-11 76.3 142 35.2
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 1.7e-11 75.5 142 36.6
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 1.7e-11 75.5 141 34.8
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 2.3e-11 75.1 140 35.0
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 2.3e-11 75.1 140 37.1
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 3.9e-11 74.3 138 34.8
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 3.9e-11 74.3 142 33.1
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 5.1e-11 73.9 138 34.8
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 6.6e-11 73.6 141 35.5
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 6.6e-11 73.6 137 32.1
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 8.6e-11 73.2 140 35.0
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 1.1e-10 72.8 142 35.2
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.1e-10 72.8 142 34.5
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 1.1e-10 72.8 142 34.5
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.1e-10 72.8 138 34.1
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 1.1e-10 72.8 137 32.1
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 1.5e-10 72.4 138 35.5
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 1.5e-10 72.4 138 34.1
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 1.5e-10 72.4 138 37.0
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 1.5e-10 72.4 137 35.8
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 1.9e-10 72.0 148 31.1
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 1.9e-10 72.0 148 31.1
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 1.9e-10 72.0 141 35.5
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 2.5e-10 71.6 139 30.9
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 2.5e-10 71.6 137 34.3
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 3.3e-10 71.2 138 33.3
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 3.3e-10 71.2 141 32.6
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 4.3e-10 70.9 137 34.3
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 4.3e-10 70.9 146 30.8
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 4.3e-10 70.9 143 31.5
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 4.3e-10 70.9 137 32.1
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 4.3e-10 70.9 148 31.1
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 5.6e-10 70.5 144 32.6
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 5.6e-10 70.5 148 30.4
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 5.6e-10 70.5 141 36.2
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 5.6e-10 70.5 144 34.7
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 7.3e-10 70.1 142 34.5
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 7.3e-10 70.1 147 32.0
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 7.3e-10 70.1 138 34.1
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 9.5e-10 69.7 147 34.7
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 9.5e-10 69.7 147 34.0
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 9.5e-10 69.7 138 33.3
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 9.5e-10 69.7 144 33.3
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 9.5e-10 69.7 140 34.3
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 1.2e-09 69.3 141 31.2
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 1.2e-09 69.3 139 33.8
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 1.6e-09 68.9 139 33.1
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 1.6e-09 68.9 138 36.2
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 2.1e-09 68.6 139 30.9
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 2.1e-09 68.6 138 35.5
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 2.1e-09 68.6 138 32.6
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.1e-09 68.6 137 30.7
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 2.8e-09 68.2 148 29.7
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 3.6e-09 67.8 137 35.0
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 3.6e-09 67.8 137 35.0
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 3.6e-09 67.8 138 32.6
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 3.6e-09 67.8 138 31.2
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 3.6e-09 67.8 138 32.6
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 3.6e-09 67.8 137 34.3
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 4.7e-09 67.4 141 31.9
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 6.2e-09 67.0 138 34.8
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 8.1e-09 66.6 137 34.3
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 8.1e-09 66.6 139 31.7
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 1.1e-08 66.2 138 33.3
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 1.1e-08 66.2 139 31.7
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 1.1e-08 66.2 140 33.6
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 1.4e-08 65.9 139 30.2
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 1.4e-08 65.9 139 33.1
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 1.4e-08 65.9 140 30.7
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 1.8e-08 65.5 138 34.8
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 2.4e-08 65.1 142 31.7
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 4.0e-08 64.3 139 32.4
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 5.2e-08 63.9 140 32.9
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 5.2e-08 63.9 139 32.4
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 5.2e-08 63.9 128 32.0
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 6.8e-08 63.5 137 31.4
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 6.8e-08 63.5 137 30.7
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 8.9e-08 63.2 137 31.4
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 1.5e-07 62.4 139 31.7
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 1.5e-07 62.4 139 31.7
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 2.0e-07 62.0 140 32.9
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 2.0e-07 62.0 140 32.9
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 2.0e-07 62.0 140 32.9
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 2.0e-07 62.0 140 32.1
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 3.4e-07 61.2 136 30.1
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 5.8e-07 60.5 139 30.9
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 7.6e-07 60.1 134 30.6
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 1.3e-06 59.3 138 33.3
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 8.4e-06 56.6 133 31.6


User provided reference genes

Program Settings