Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre09.g401350 Chlamydomonas reinhardtii HOM05D006376 ORTHO05D008046 1.0e-131 473.4 238 100.0
CANSAT21G0790 Cannabis sativa HOM05D006376 ORTHO05D008046 8.7e-22 108.2 178 38.2
Phvul.002G327000 Phaseolus vulgaris HOM05D006376 ORTHO05D008046 1.1e-21 107.8 174 39.1
Sabra12G0035600 Salix brachista HOM05D006376 ORTHO05D008046 1.1e-21 107.8 179 37.4
MELO3C017340.2 Cucumis melo HOM05D006376 ORTHO05D008046 1.5e-21 107.5 174 39.1
TPR.G12760 Trifolium pratense HOM05D006376 ORTHO05D008046 1.9e-21 107.1 174 36.2
QL10p027316 Quercus lobata HOM05D006376 ORTHO05D008046 3.3e-21 106.3 178 37.1
Actinidia02655 Actinidia chinensis HOM05D006376 ORTHO05D008046 4.3e-21 105.9 186 36.0
Psat7g004120 Pisum sativum HOM05D006376 ORTHO05D008046 4.3e-21 105.9 174 36.8
Medtr8g106690 Medicago truncatula HOM05D006376 ORTHO05D008046 5.6e-21 105.5 174 36.2
THA.LOC104813912 Tarenaya hassleriana HOM05D006376 ORTHO05D008046 7.3e-21 105.1 174 37.9
Os01g0120500 Oryza sativa ssp. japonica HOM05D006376 ORTHO05D008046 9.6e-21 104.8 192 35.9
GSVIVG01008377001 Vitis vinifera HOM05D006376 ORTHO05D008046 9.6e-21 104.8 174 37.4
Cfa019704 Carpinus fangiana HOM05D006376 ORTHO05D008046 1.3e-20 104.4 174 37.4
CsaV3_1G004140 Cucumis sativus L. HOM05D006376 ORTHO05D008046 1.3e-20 104.4 174 38.5
Glyma.08G051100 Glycine max HOM05D006376 ORTHO05D008046 1.3e-20 104.4 174 38.5
CAN.G423.18 Capsicum annuum HOM05D006376 ORTHO05D008046 2.1e-20 103.6 176 35.8
Dinv13549 Davidia involucrata HOM05D006376 ORTHO05D008046 2.1e-20 103.6 177 37.9
Gohir.D12G268200 Gossypium hirsutum HOM05D006376 ORTHO05D008046 2.1e-20 103.6 174 37.9
Manes.14G168100 Manihot esculenta HOM05D006376 ORTHO05D008046 2.1e-20 103.6 174 36.8
Prupe.5G228200 Prunus persica HOM05D006376 ORTHO05D008046 2.1e-20 103.6 174 37.9
Aqoxy3G03987 Aquilegia oxysepala HOM05D006376 ORTHO05D008046 2.8e-20 103.2 174 36.2
Cc04_g06670 Coffea canephora HOM05D006376 ORTHO05D008046 2.8e-20 103.2 176 36.9
Lj3g0018404 Lotus japonicus HOM05D006376 ORTHO05D008046 2.8e-20 103.2 172 37.2
Lalb_Chr09g0330601 Lupinus albus HOM05D006376 ORTHO05D008046 2.8e-20 103.2 174 37.4
VMungo0251G1463 Vigna mungo HOM05D006376 ORTHO05D008046 2.8e-20 103.2 174 39.1
Haze_18787 Corylus avellana HOM05D006376 ORTHO05D008046 3.6e-20 102.8 188 34.0
ECA233G1742 Erigeron canadensis HOM05D006376 ORTHO05D008046 3.6e-20 102.8 180 38.9
Lj4g0006852 Lotus japonicus HOM05D006376 ORTHO05D008046 3.6e-20 102.8 174 38.5
AagrBONN_evm.TU.Sc2ySwM_340.32 Anthoceros agrestis HOM05D006376 ORTHO05D008046 4.8e-20 102.4 182 35.2
A08p30580 Brassica napus HOM05D006376 ORTHO05D008046 4.8e-20 102.4 204 35.8
C08p18330 Brassica napus HOM05D006376 ORTHO05D008046 4.8e-20 102.4 203 36.5
BolC8t49467H Brassica oleracea HOM05D006376 ORTHO05D008046 4.8e-20 102.4 203 36.5
BraA08t34989Z Brassica rapa HOM05D000280 ORTHO05D004091 4.8e-20 102.4 184 36.4
Carub.0001s1773 Capsella rubella HOM05D006376 ORTHO05D008046 4.8e-20 102.4 204 34.8
DCAR_014774 Daucus carota HOM05D006376 ORTHO05D008046 4.8e-20 102.4 176 38.1
Lj9A422G67 Lonicera japonica HOM05D006376 ORTHO05D008046 4.8e-20 102.4 176 37.5
Potri.012G052300 Populus trichocarpa HOM05D006376 ORTHO05D008046 4.8e-20 102.4 174 36.2
Hund02337 Selenicereus undatus HOM05D006376 ORTHO05D008046 4.8e-20 102.4 201 36.3
PGSC0003DMG400028793 Solanum tuberosum HOM05D006376 ORTHO05D008046 4.8e-20 102.4 176 35.2
AL1G30420 Arabidopsis lyrata HOM05D006376 ORTHO05D008046 6.2e-20 102.1 204 34.3
MSTRG.4559 Avicennia marina HOM05D006376 ORTHO05D008046 6.2e-20 102.1 176 36.4
Glyma.05G243300 Glycine max HOM05D006376 ORTHO05D008046 6.2e-20 102.1 178 37.1
Rhsim07G0069700 Rhododendron simsii HOM05D006376 ORTHO05D008046 6.2e-20 102.1 176 36.4
RhsimUnG0086600 Rhododendron simsii HOM05D006376 ORTHO05D008046 6.2e-20 102.1 176 36.9
Thecc.03G047000 Theobroma cacao HOM05D006376 ORTHO05D008046 6.2e-20 102.1 174 36.2
TWI81G0521 Tripterygium wilfordii HOM05D006376 ORTHO05D008046 6.2e-20 102.1 174 38.5
RcHm_v2.0_Chr7g0179071 Rosa chinensis HOM05D006376 ORTHO05D008046 8.1e-20 101.7 176 36.4
AT1G18060 Arabidopsis thaliana HOM05D006376 ORTHO05D008046 1.1e-19 101.3 204 33.8
AUR62033755 Chenopodium quinoa HOM05D006376 ORTHO05D008046 1.1e-19 101.3 174 38.5
Gorai.008G288200 Gossypium raimondii HOM05D006376 ORTHO05D008046 1.1e-19 101.3 174 37.4
Solyc06g069030.3 Solanum lycopersicum HOM05D006376 ORTHO05D008046 1.1e-19 101.3 176 34.7
BcaC07g38909 Brassica carinata HOM05D006376 ORTHO05D008046 1.4e-19 100.9 170 37.6
CARHR018640 Cardamine hirsuta HOM05D006376 ORTHO05D008046 1.4e-19 100.9 204 33.8
Ca_17222_v3 Cicer arietinum L. HOM05D006376 ORTHO05D008046 1.4e-19 100.9 171 35.7
Lsat_1_v5_gn_8_3561 Lactuca sativa HOM05D006376 ORTHO05D008046 1.4e-19 100.9 176 38.1
Sc04g0003270 Simmondsia chinensis HOM05D006376 ORTHO05D008046 1.4e-19 100.9 186 36.0
SGA_v2.0_scaffold171G38935 Striga asiatica HOM05D006376 ORTHO05D008046 1.4e-19 100.9 176 36.4
Oeu024338.1 Olea europaea HOM05D006376 ORTHO05D008046 1.8e-19 100.5 176 36.9
Rhsim07G0070500 Rhododendron simsii HOM05D006376 ORTHO05D008046 1.8e-19 100.5 176 36.4
Zm00001eb334810 Zea mays HOM05D006376 ORTHO05D008046 1.8e-19 100.5 189 34.9
Thhalv10008687m.g Eutrema salsugineum HOM05D006376 ORTHO05D008046 2.4e-19 100.1 204 35.8
Peaxi162Scf00332g00023 Petunia axillaris HOM05D006376 ORTHO05D008046 2.4e-19 100.1 176 36.9
AUR62029950 Chenopodium quinoa HOM05D006376 ORTHO05D008046 3.1e-19 99.8 174 38.5
Eucgr.B00851 Eucalyptus grandis HOM05D006376 ORTHO05D008046 3.1e-19 99.8 174 36.8
Pp3c8_21790 Physcomitrium patens HOM05D006376 ORTHO05D008046 3.1e-19 99.8 173 34.7
COL.COLO4_37647 Corchorus olitorius HOM05D006376 ORTHO05D008046 4.0e-19 99.4 174 35.6
Atru.chr9.942 Acer truncatum HOM05D006376 ORTHO05D008046 5.3e-19 99.0 171 35.7
CiPaw.15G138400 Carya illinoinensis HOM05D006376 ORTHO05D008046 5.3e-19 99.0 174 35.6
CiPaw.15G139000 Carya illinoinensis HOM05D006376 ORTHO05D008046 5.3e-19 99.0 174 35.6
PSO717G0073 Papaver somniferum HOM05D006376 ORTHO05D008046 5.3e-19 99.0 176 36.9
FvH4_5g16950 Fragaria vesca HOM05D006376 ORTHO05D008046 6.9e-19 98.6 176 33.5
FAN18G1549 Fragaria x ananassa HOM05D006376 ORTHO05D008046 6.9e-19 98.6 176 33.5
Nn3g18015 Nelumbo nucifera HOM05D006376 ORTHO05D008046 6.9e-19 98.6 174 35.1
PSO675G4918 Papaver somniferum HOM05D006376 ORTHO05D008046 6.9e-19 98.6 203 34.5
Sopen06g026320 Solanum pennellii HOM05D006376 ORTHO05D008046 6.9e-19 98.6 176 34.1
Duzib205G0506 Durio zibethinus HOM05D006376 ORTHO05D008046 9.0e-19 98.2 182 35.2
Hma1.2p1_0660F.1_g197700 Hydrangea macrophylla HOM05D006376 ORTHO05D008046 9.0e-19 98.2 176 37.5
MBI16_g21168_MAGBIO Magnolia biondii HOM05D006376 ORTHO05D008046 9.0e-19 98.2 174 33.3
arahy.Tifrunner.gnm1.ann1.5Y9SE5 Arachis hypogaea HOM05D006376 ORTHO05D008046 1.2e-18 97.8 174 36.2
FAN08G1323 Fragaria x ananassa HOM05D006376 ORTHO05D008046 1.2e-18 97.8 176 33.5
arahy.Tifrunner.gnm1.ann1.CZ5T9B Arachis hypogaea HOM05D006376 ORTHO05D008046 2.0e-18 97.1 172 35.5
FAN13G1861 Fragaria x ananassa HOM05D006376 ORTHO05D008046 2.0e-18 97.1 174 33.3
Cpa.g.sc3.442 Carica papaya HOM05D006376 ORTHO05D008046 2.6e-18 96.7 191 34.0
EL10Ac5g11519 Beta vulgaris HOM05D006376 ORTHO05D008046 3.4e-18 96.3 174 37.4
Ciclev10009207m.g Citrus clementina HOM05D006376 ORTHO05D008046 3.4e-18 96.3 174 35.6
FAN04G0856 Fragaria x ananassa HOM05D006376 ORTHO05D008046 3.4e-18 96.3 174 33.3
Nitab4.5_0012340g0010 Nicotiana tabacum HOM05D006376 ORTHO05D008046 3.4e-18 96.3 176 34.7
ATR0691G291 Amborella trichopoda HOM05D006376 ORTHO05D008046 4.5e-18 95.9 175 33.7
TAR629G1456 Trochodendron aralioides HOM05D006376 ORTHO05D008046 4.5e-18 95.9 174 34.5
PGR083G0770 Punica granatum HOM05D006376 ORTHO05D008046 7.6e-18 95.1 218 30.7
Mapoly0001s0324 Marchantia polymorpha HOM05D006376 ORTHO05D008046 9.9e-18 94.7 198 33.8
Nitab4.5_0001194g0140 Nicotiana tabacum HOM05D006376 ORTHO05D008046 2.2e-17 93.6 176 34.1
HPP92_000150 Vanilla planifolia HOM05D006376 ORTHO05D008046 2.2e-17 93.6 177 31.1
HanXRQChr05g0144491 Helianthus annuus HOM05D006376 ORTHO05D008046 4.9e-17 92.4 210 32.9
Sp1g16080 Schrenkiella parvula HOM05D006376 ORTHO05D008046 4.9e-17 92.4 156 37.2
CDE03G0312 Ceratophyllum demersum HOM05D006376 ORTHO05D008046 6.4e-17 92.0 174 32.8
SEGI_27865 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 6.4e-17 92.0 155 34.8
vmacro17793 Vaccinium macrocarpon HOM05D006376 ORTHO05D008046 6.4e-17 92.0 210 32.4
SMO116G0316 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 1.4e-16 90.9 213 31.5
Aa31LG6G2990 Aethionema arabicum HOM05D006376 ORTHO05D008046 1.9e-16 90.5 207 31.4
Duzib084G1315 Durio zibethinus HOM05D006376 ORTHO05D008046 1.2e-15 87.8 174 32.8
PRCOL_00002665 Prasinoderma coloniale HOM05D006376 ORTHO05D008046 2.3e-14 83.6 206 34.0
MD06G1223100 Malus domestica HOM05D006376 ORTHO05D008046 3.3e-13 79.7 121 38.0
ClCG06G014480 Citrullus lanatus HOM05D006376 ORTHO05D008046 1.6e-12 77.4 172 32.0
Migut.D01443 Erythranthe guttata HOM05D006376 ORTHO05D008046 8.1e-12 75.1 172 31.4
SMO164G0083 Selaginella moellendorffii HOM05D006376 ORTHO05D008046 2.4e-11 73.6 175 31.4
Gohir.A12G267700 Gossypium hirsutum HOM05D006376 ORTHO05D008046 5.8e-10 68.9 171 30.4
SEGI_30520 Sequoiadendron giganteum HOM05D006376 ORTHO05D008046 1.7e-09 67.4 92 38.0
unitig_21.g20431 Utricularia gibba HOM05D006376 ORTHO05D008046 2.2e-09 67.0 199 28.6


User provided reference genes

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