Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre09.g394547 Chlamydomonas reinhardtii HOM05D020634 ORTHO05D003935 3.6e-278 961.1 522 100.0
Cre09.g394621 Chlamydomonas reinhardtii HOM05D020634 ORTHO05D145665 4.1e-24 117.1 273 32.2
Cre09.g394473 Chlamydomonas reinhardtii HOM05D020634 ORTHO05D003935 5.5e-21 106.7 360 27.8
Cre12.g492750 Chlamydomonas reinhardtii HOM05D003809 ORTHO05D138784 4.9e-09 67.0 79 43.0
Lj1g0000205 Lotus japonicus HOM05D003809 ORTHO05D003935 1.8e-08 65.1 102 31.4
Os05g0446900 Oryza sativa ssp. japonica HOM05D003809 ORTHO05D003935 2.4e-08 64.7 149 29.5
SalBow4G1747 Salvia bowleyana HOM05D003809 ORTHO05D003935 4.1e-08 63.9 97 38.1
VMungo1383G0216 Vigna mungo HOM05D003809 ORTHO05D003935 5.4e-08 63.5 88 36.4
CDE04G0185 Ceratophyllum demersum HOM05D003809 ORTHO05D003935 7.0e-08 63.2 68 36.8
Ciclev10011409m.g Citrus clementina HOM05D003809 ORTHO05D003935 7.0e-08 63.2 111 31.5
Sc07g0006540 Simmondsia chinensis HOM05D003809 ORTHO05D003935 9.2e-08 62.8 361 22.4
Peaxi162Scf00141g00342 Petunia axillaris HOM05D003809 ORTHO05D003935 2.7e-07 61.2 67 34.3
Aa31LG1G22880 Aethionema arabicum HOM05D003809 ORTHO05D003935 3.5e-07 60.8 67 37.3
CDE03G0216 Ceratophyllum demersum HOM05D003809 ORTHO05D003935 5.9e-07 60.1 68 35.3
Phvul.008G105500 Phaseolus vulgaris HOM05D003809 ORTHO05D003935 5.9e-07 60.1 87 32.2
CiPaw.09G207900 Carya illinoinensis HOM05D003809 ORTHO05D003935 1.7e-06 58.5 59 42.4
Pp3c6_22980 Physcomitrium patens HOM05D003809 ORTHO05D003935 2.3e-06 58.2 150 30.0
Manes.01G162300 Manihot esculenta HOM05D003809 ORTHO05D003935 2.9e-06 57.8 165 29.1
MSTRG.10226 Avicennia marina HOM05D003809 ORTHO05D003935 3.9e-06 57.4 138 30.4
Nitab4.5_0000335g0110 Nicotiana tabacum HOM05D003809 ORTHO05D003935 5.0e-06 57.0 108 29.6
Zm00001eb367050 Zea mays HOM05D003809 ORTHO05D003935 5.0e-06 57.0 99 30.3
Eucgr.K02988 Eucalyptus grandis HOM05D003809 ORTHO05D003935 6.6e-06 56.6 97 32.0


User provided reference genes

Program Settings