Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre09.g394510 Chlamydomonas reinhardtii HOM05D020634 ORTHO05D003935 1.1e-233 813.5 601 100.0
Cre09.g394473 Chlamydomonas reinhardtii HOM05D020634 ORTHO05D003935 9.2e-12 76.3 98 41.8
Sc06g0006210 Simmondsia chinensis HOM05D003809 ORTHO05D003935 7.3e-09 66.6 68 44.1
Cre12.g492750 Chlamydomonas reinhardtii HOM05D003809 ORTHO05D138784 1.6e-08 65.5 84 44.0
COL.COLO4_19141 Corchorus olitorius HOM05D000001 ORTHO05D000003 1.8e-07 62.0 69 42.0
MSTRG.10226 Avicennia marina HOM05D003809 ORTHO05D003935 5.2e-07 60.5 105 37.1
Glyma.03G063000 Glycine max HOM05D003809 ORTHO05D003935 5.2e-07 60.5 70 41.4
Glyma.03G062800 Glycine max HOM05D003809 ORTHO05D003935 6.8e-07 60.1 70 41.4
Rhsim13G0070300 Rhododendron simsii HOM05D003809 ORTHO05D003935 8.9e-07 59.7 68 41.2
Glyma.03G061700 Glycine max HOM05D003809 ORTHO05D003935 1.2e-06 59.3 70 41.4
Glyma.03G061802 Glycine max HOM05D003809 ORTHO05D003935 1.2e-06 59.3 70 41.4
Glyma.03G061852 Glycine max HOM05D003809 ORTHO05D003935 1.2e-06 59.3 70 41.4
Glyma.03G062100 Glycine max HOM05D003809 ORTHO05D003935 1.2e-06 59.3 70 41.4
Glyma.03G062300 Glycine max HOM05D003809 ORTHO05D003935 1.2e-06 59.3 70 41.4
Cre09.g394621 Chlamydomonas reinhardtii HOM05D020634 ORTHO05D145665 1.5e-06 58.9 99 39.4
Glyma.01G115000 Glycine max HOM05D003809 ORTHO05D003935 2.0e-06 58.5 70 40.0
Glyma.03G062500 Glycine max HOM05D003809 ORTHO05D003935 2.0e-06 58.5 70 40.0
Cc01_g20760 Coffea canephora HOM05D003809 ORTHO05D003935 2.6e-06 58.2 68 35.3
Cc06_g01490 Coffea canephora HOM05D003809 ORTHO05D003935 2.6e-06 58.2 68 35.3
TPR.G13325 Trifolium pratense HOM05D003809 ORTHO05D003935 2.6e-06 58.2 70 38.6
Glyma.U024600 Glycine max HOM05D003809 ORTHO05D003935 9.9e-06 56.2 70 40.0
Manes.02G120500 Manihot esculenta HOM05D003809 ORTHO05D003935 9.9e-06 56.2 68 38.2
Sed0014073 Sechium edule HOM05D003809 ORTHO05D003935 9.9e-06 56.2 85 40.0


User provided reference genes

Program Settings