Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre09.g394473 Chlamydomonas reinhardtii HOM05D020634 ORTHO05D003935 1.3e-279 966.1 591 100.0
Cre12.g492750 Chlamydomonas reinhardtii HOM05D003809 ORTHO05D138784 2.8e-21 107.8 318 31.4
Cre09.g394547 Chlamydomonas reinhardtii HOM05D020634 ORTHO05D003935 1.3e-18 99.0 360 27.8
Cre09.g394621 Chlamydomonas reinhardtii HOM05D020634 ORTHO05D145665 2.8e-13 81.3 310 29.0
Cre09.g394510 Chlamydomonas reinhardtii HOM05D020634 ORTHO05D003935 3.1e-12 77.8 98 41.8
Cre12.g551200 Chlamydomonas reinhardtii HOM05D003809 ORTHO05D003935 1.0e-07 62.8 93 37.6
Cpa.g.sc112.34 Carica papaya HOM05D003809 ORTHO05D003935 1.8e-07 62.0 66 36.4
CDE04G0185 Ceratophyllum demersum HOM05D003809 ORTHO05D003935 1.8e-07 62.0 68 35.3
Lalb_Chr07g0193501 Lupinus albus HOM05D003809 ORTHO05D003935 1.8e-07 62.0 67 34.3
FAN02G0645 Fragaria x ananassa HOM05D003809 ORTHO05D003935 2.3e-07 61.6 67 34.3
FvH4_6g11650 Fragaria vesca HOM05D003809 ORTHO05D003935 3.0e-07 61.2 67 34.3
FAN09G2283 Fragaria x ananassa HOM05D003809 ORTHO05D003935 3.0e-07 61.2 67 34.3
Glyma.03G062500 Glycine max HOM05D003809 ORTHO05D003935 3.0e-07 61.2 65 36.9
Aa31LG1G22880 Aethionema arabicum HOM05D003809 ORTHO05D003935 3.9e-07 60.8 67 37.3
Glyma.03G062800 Glycine max HOM05D003809 ORTHO05D003935 3.9e-07 60.8 65 36.9
SalBow4G1747 Salvia bowleyana HOM05D003809 ORTHO05D003935 3.9e-07 60.8 91 36.3
Glyma.03G063000 Glycine max HOM05D003809 ORTHO05D003935 5.2e-07 60.5 65 36.9
Potri.016G114500 Populus trichocarpa HOM05D003809 ORTHO05D003935 5.2e-07 60.5 69 34.8
Glyma.03G061700 Glycine max HOM05D003809 ORTHO05D003935 6.7e-07 60.1 65 36.9
Glyma.03G061802 Glycine max HOM05D003809 ORTHO05D003935 6.7e-07 60.1 65 36.9
Glyma.03G061852 Glycine max HOM05D003809 ORTHO05D003935 6.7e-07 60.1 65 36.9
Glyma.03G062100 Glycine max HOM05D003809 ORTHO05D003935 6.7e-07 60.1 65 36.9
Glyma.03G062300 Glycine max HOM05D003809 ORTHO05D003935 6.7e-07 60.1 65 36.9
Gohir.D09G160100 Gossypium hirsutum HOM05D003809 ORTHO05D003935 6.7e-07 60.1 83 33.7
Gorai.006G181700 Gossypium raimondii HOM05D003809 ORTHO05D003935 6.7e-07 60.1 83 33.7
CDE03G0216 Ceratophyllum demersum HOM05D003809 ORTHO05D003935 8.8e-07 59.7 68 35.3
Lj3g0017704 Lotus japonicus HOM05D003809 ORTHO05D003935 8.8e-07 59.7 65 32.3
Ciclev10011409m.g Citrus clementina HOM05D003809 ORTHO05D003935 1.1e-06 59.3 65 33.8
Eucgr.K02988 Eucalyptus grandis HOM05D003809 ORTHO05D003935 1.1e-06 59.3 67 31.3
MCO16G448 Micromonas commoda HOM05D003809 ORTHO05D003935 1.1e-06 59.3 133 35.3
TPR.G13325 Trifolium pratense HOM05D003809 ORTHO05D003935 1.1e-06 59.3 65 33.8
Duzib106G1511 Durio zibethinus HOM05D003809 ORTHO05D003935 1.5e-06 58.9 67 34.3
Glyma.03G061751 Glycine max HOM05D003809 ORTHO05D003935 1.5e-06 58.9 61 37.7
Glyma.01G115000 Glycine max HOM05D003809 ORTHO05D003935 2.0e-06 58.5 65 35.4
Gohir.A09G164500 Gossypium hirsutum HOM05D003809 ORTHO05D003935 2.0e-06 58.5 83 33.7
Duzib128G0737 Durio zibethinus HOM05D003809 ORTHO05D003935 2.6e-06 58.2 67 35.8
Pp3c6_22980 Physcomitrium patens HOM05D003809 ORTHO05D003935 2.6e-06 58.2 85 30.6
Aqoxy4G02610 Aquilegia oxysepala HOM05D003809 ORTHO05D003935 3.3e-06 57.8 69 34.8
COL.COLO4_19141 Corchorus olitorius HOM05D000001 ORTHO05D000003 3.3e-06 57.8 67 35.8
Gohir.D11G348800 Gossypium hirsutum HOM05D003809 ORTHO05D003935 3.3e-06 57.8 67 35.8
Gorai.007G379100 Gossypium raimondii HOM05D003809 ORTHO05D003935 3.3e-06 57.8 67 35.8
Sc06g0006210 Simmondsia chinensis HOM05D003809 ORTHO05D003935 3.3e-06 57.8 66 31.8
Lsat_1_v5_gn_5_155280 Lactuca sativa HOM05D003809 ORTHO05D003935 4.4e-06 57.4 67 32.8
Cre06.g269650 Chlamydomonas reinhardtii HOM05D003809 ORTHO05D003935 5.7e-06 57.0 76 38.2
Glyma.U024600 Glycine max HOM05D003809 ORTHO05D003935 5.7e-06 57.0 65 35.4
Psat7g246040 Pisum sativum HOM05D003809 ORTHO05D003935 5.7e-06 57.0 65 32.3
SGA_v2.0_scaffold240G44100 Striga asiatica HOM05D003809 ORTHO05D003935 5.7e-06 57.0 99 30.3
CAN.G772.1 Capsicum annuum HOM05D003809 ORTHO05D003935 7.4e-06 56.6 69 36.2
Gohir.A11G329600 Gossypium hirsutum HOM05D003809 ORTHO05D003935 7.4e-06 56.6 93 32.3
Medtr4g015550 Medicago truncatula HOM05D003809 ORTHO05D003935 9.7e-06 56.2 65 32.3
Oeu055170.1 Olea europaea HOM05D003809 ORTHO05D003935 9.7e-06 56.2 67 32.8


User provided reference genes

Program Settings