Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre09.g391393 Chlamydomonas reinhardtii HOM05D000239 ORTHO05D141518 2.3e-205 718.8 387 100.0
Cre09.g393062 Chlamydomonas reinhardtii HOM05D000239 ORTHO05D143296 2.2e-43 180.6 203 53.7
Cre09.g391356 Chlamydomonas reinhardtii HOM05D000239 ORTHO05D141564 1.0e-35 155.2 106 74.5
Cre02.g102900 Chlamydomonas reinhardtii HOM05D000088 ORTHO05D145152 1.9e-18 97.8 162 32.7
Cre02.g102650 Chlamydomonas reinhardtii HOM05D000088 ORTHO05D140303 2.5e-18 97.4 167 34.1
Cre12.g547200 Chlamydomonas reinhardtii HOM05D000088 ORTHO05D145179 6.1e-17 92.8 128 36.7
Cre10.g429250 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D145264 1.5e-15 88.2 274 31.8
Cre06.g287700 Chlamydomonas reinhardtii HOM05D000088 ORTHO05D144837 3.4e-15 87.0 189 31.7
Cre10.g445700 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D142979 4.9e-14 83.2 167 34.1
Cre02.g141946 Chlamydomonas reinhardtii HOM05D000088 ORTHO05D138843 4.5e-12 76.6 216 31.5
Cre06.g268950 Chlamydomonas reinhardtii HOM05D000088 ORTHO05D141899 5.9e-12 76.3 214 29.4
Cre06.g267400 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D140300 3.9e-11 73.6 211 30.8
Cre09.g398750 Chlamydomonas reinhardtii HOM05D000088 ORTHO05D144259 3.9e-11 73.6 157 33.1
Cre02.g104201 Chlamydomonas reinhardtii HOM05D000088 ORTHO05D146363 2.5e-10 70.9 152 32.9
Cre13.g566450 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D000830 5.6e-10 69.7 166 29.5
Cre01.g041550 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D139393 7.3e-10 69.3 206 31.6
Cre03.g176400 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D000830 1.2e-09 68.6 189 29.1
Cre12.g558300 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D144495 2.1e-09 67.8 228 31.6
Cre09.g390171 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D141163 4.7e-09 66.6 290 30.7
Cre10.g422900 Chlamydomonas reinhardtii HOM05D000088 ORTHO05D140304 1.4e-08 65.1 178 29.8
Cre02.g141806 Chlamydomonas reinhardtii HOM05D021650 ORTHO05D028782 4.0e-08 63.5 158 29.1
Cre10.g423200 Chlamydomonas reinhardtii HOM05D033309 ORTHO05D140111 3.4e-07 60.5 134 29.9
Potri.002G111200 Populus trichocarpa HOM05D000239 ORTHO05D000484 4.4e-07 60.1 139 29.5
A10p28920 Brassica napus HOM05D000761 ORTHO05D006380 5.8e-07 59.7 106 32.1
C09p69270 Brassica napus HOM05D000761 ORTHO05D006380 5.8e-07 59.7 106 32.1
BolC9t59671H Brassica oleracea HOM05D000761 ORTHO05D006380 5.8e-07 59.7 106 32.1
BraA10t44939Z Brassica rapa HOM05D000761 ORTHO05D006380 5.8e-07 59.7 106 32.1
Cre19.g751097 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D028782 9.8e-07 58.9 109 35.8
Cre02.g103900 Chlamydomonas reinhardtii HOM05D000320 ORTHO05D028782 1.7e-06 58.2 275 28.0
Thhalv10013017m.g Eutrema salsugineum HOM05D000088 ORTHO05D006380 1.7e-06 58.2 102 32.4
Potri.005G153100 Populus trichocarpa HOM05D000239 ORTHO05D000484 2.2e-06 57.8 128 29.7
Sabra02G0087700 Salix brachista HOM05D000239 ORTHO05D000484 3.7e-06 57.0 139 28.8
EL10Ac1g00503 Beta vulgaris HOM05D000239 ORTHO05D000484 8.3e-06 55.8 125 31.2


User provided reference genes

Program Settings