Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre09.g387850 Chlamydomonas reinhardtii HOM05D001516 ORTHO05D144375 0.0e+00 2222.6 1758 100.0
Cre01.g004600 Chlamydomonas reinhardtii HOM05D022908 ORTHO05D144444 1.6e-16 93.6 139 39.6
Cre04.g218050 Chlamydomonas reinhardtii HOM05D001516 ORTHO05D146876 2.1e-16 93.2 134 41.0
Cre06.g297150 Chlamydomonas reinhardtii HOM05D001516 ORTHO05D001357 4.4e-14 85.5 121 40.5
Cre03.g153050 Chlamydomonas reinhardtii HOM05D001516 ORTHO05D139119 2.7e-11 76.3 148 35.8
arahy.Tifrunner.gnm1.ann1.P8HI4P Arachis hypogaea HOM05D001516 ORTHO05D001357 2.8e-08 66.2 108 33.3
Ca_16717_v3 Cicer arietinum L. HOM05D001516 ORTHO05D001357 2.8e-08 66.2 107 37.4
Medtr3g091700 Medicago truncatula HOM05D001516 ORTHO05D001357 2.4e-07 63.2 109 38.5
CANSAT21G0435 Cannabis sativa HOM05D001516 ORTHO05D001357 4.0e-07 62.4 112 33.9
Lj1g0012358 Lotus japonicus HOM05D001516 ORTHO05D001357 4.0e-07 62.4 112 34.8
Cre03.g149400 Chlamydomonas reinhardtii HOM05D001516 ORTHO05D001357 5.3e-07 62.0 127 30.7
DCAR_020332 Daucus carota HOM05D001516 ORTHO05D001357 5.3e-07 62.0 107 34.6
DCAR_020327 Daucus carota HOM05D001516 ORTHO05D001357 6.9e-07 61.6 107 33.6
FAN06G1894 Fragaria x ananassa HOM05D001516 ORTHO05D001357 6.9e-07 61.6 108 37.0
arahy.Tifrunner.gnm1.ann1.IZ1X2W Arachis hypogaea HOM05D001516 ORTHO05D001357 9.0e-07 61.2 108 32.4
Lj1g0007070 Lotus japonicus HOM05D001516 ORTHO05D001357 9.0e-07 61.2 112 33.0
FAN03G2432 Fragaria x ananassa HOM05D001516 ORTHO05D001357 1.2e-06 60.8 112 35.7
RcHm_v2.0_Chr1g0380421 Rosa chinensis HOM05D001516 ORTHO05D001357 1.2e-06 60.8 108 38.0
Glyma.04G234600 Glycine max HOM05D001516 ORTHO05D001357 1.5e-06 60.5 107 33.6
Psat5g076200 Pisum sativum HOM05D001516 ORTHO05D001357 1.5e-06 60.5 107 33.6
TPR.G18780 Trifolium pratense HOM05D001516 ORTHO05D001357 2.0e-06 60.1 107 33.6
TPR.G9267 Trifolium pratense HOM05D001516 ORTHO05D001357 2.0e-06 60.1 111 30.6
CAN.G837.21 Capsicum annuum HOM05D001516 ORTHO05D001357 2.6e-06 59.7 111 30.6
Peaxi162Scf00740g00141 Petunia axillaris HOM05D001516 ORTHO05D001357 2.6e-06 59.7 112 33.9
Sopen03g035000 Solanum pennellii HOM05D001516 ORTHO05D001357 2.6e-06 59.7 111 31.5
GSVIVG01038562001 Vitis vinifera HOM05D001516 ORTHO05D001357 3.4e-06 59.3 110 32.7
CAN.G481.21 Capsicum annuum HOM05D001516 ORTHO05D001357 4.5e-06 58.9 107 31.8
Cre03.g149350 Chlamydomonas reinhardtii HOM05D001516 ORTHO05D001357 4.5e-06 58.9 159 30.2
MELO3C008502.2 Cucumis melo HOM05D001516 ORTHO05D001357 4.5e-06 58.9 115 35.7
Glyma.06G130000 Glycine max HOM05D001516 ORTHO05D001357 4.5e-06 58.9 107 33.6
Solyc03g116010.3 Solanum lycopersicum HOM05D001516 ORTHO05D001357 4.5e-06 58.9 111 31.5
FAN01G1019 Fragaria x ananassa HOM05D001516 ORTHO05D001357 5.8e-06 58.5 108 36.1
FAN06G2602 Fragaria x ananassa HOM05D001516 ORTHO05D001357 5.8e-06 58.5 128 34.4
Lalb_Chr11g0066961 Lupinus albus HOM05D001516 ORTHO05D001357 5.8e-06 58.5 108 32.4
MD01G1217600 Malus domestica HOM05D001516 ORTHO05D001357 7.6e-06 58.2 111 36.0
MD07G1286800 Malus domestica HOM05D001516 ORTHO05D001357 7.6e-06 58.2 115 34.8
Nitab4.5_0005514g0030 Nicotiana tabacum HOM05D001516 ORTHO05D001357 7.6e-06 58.2 107 31.8
Nitab4.5_0007888g0010 Nicotiana tabacum HOM05D001516 ORTHO05D001357 7.6e-06 58.2 107 31.8
Peaxi162Scf00274g00057 Petunia axillaris HOM05D001516 ORTHO05D001357 7.6e-06 58.2 111 30.6
VMungo1215G0517 Vigna mungo HOM05D001516 ORTHO05D001357 7.6e-06 58.2 121 31.4
Lj5A110G125 Lonicera japonica HOM05D001516 ORTHO05D001357 9.9e-06 57.8 108 31.5
Phvul.003G189900 Phaseolus vulgaris HOM05D001516 ORTHO05D001357 9.9e-06 57.8 115 33.0


User provided reference genes

Program Settings