Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre09.g387134 Chlamydomonas reinhardtii HOM05D006234 ORTHO05D007813 4.3e-147 524.6 261 100.0
CSS0047520 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 9.8e-19 98.2 180 34.4
CSS0048541 Camellia sinensis var. sinensis HOM05D006234 ORTHO05D007813 9.8e-19 98.2 180 34.4
HanXRQChr05g0155761 Helianthus annuus HOM05D006234 ORTHO05D007813 1.7e-18 97.4 134 42.5
Lsat_1_v5_gn_5_15020 Lactuca sativa HOM05D006234 ORTHO05D007813 1.7e-18 97.4 134 42.5
Hma1.2p1_0592F.1_g185420 Hydrangea macrophylla HOM05D006234 ORTHO05D007813 2.2e-18 97.1 180 36.1
Rhsim12G0165600 Rhododendron simsii HOM05D006234 ORTHO05D007813 3.7e-18 96.3 133 40.6
Peaxi162Scf00255g01121 Petunia axillaris HOM05D006234 ORTHO05D007813 4.9e-18 95.9 133 40.6
GSVIVG01007727001 Vitis vinifera HOM05D006234 ORTHO05D007813 4.9e-18 95.9 133 39.8
Cc04_g12080 Coffea canephora HOM05D006234 ORTHO05D007813 8.3e-18 95.1 133 40.6
Nitab4.5_0000025g0560 Nicotiana tabacum HOM05D006234 ORTHO05D007813 8.3e-18 95.1 133 39.8
Hund09446 Selenicereus undatus HOM05D006234 ORTHO05D007813 8.3e-18 95.1 179 34.6
Lj9A446T64 Lonicera japonica HOM05D006234 ORTHO05D007813 1.1e-17 94.7 133 40.6
SalBow5G5218 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.1e-17 94.7 133 39.8
vmacro16618 Vaccinium macrocarpon HOM05D006234 ORTHO05D007813 1.1e-17 94.7 133 40.6
ECA246G1070 Erigeron canadensis HOM05D006234 ORTHO05D007813 1.4e-17 94.4 134 41.8
Eucgr.K02833 Eucalyptus grandis HOM05D006234 ORTHO05D007813 1.4e-17 94.4 180 34.4
SalBow6G2400 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.4e-17 94.4 135 40.7
SalBow6G3516 Salvia bowleyana HOM05D006234 ORTHO05D007813 1.4e-17 94.4 135 40.7
Sopen12g011710 Solanum pennellii HOM05D006234 ORTHO05D007813 1.9e-17 94.0 133 38.3
Nitab4.5_0001514g0060 Nicotiana tabacum HOM05D006234 ORTHO05D007813 2.4e-17 93.6 133 39.1
Ah.02g110560 Amaranthus hybridus HOM05D006234 ORTHO05D007813 3.2e-17 93.2 180 32.8
Oeu020907.1 Olea europaea HOM05D006234 ORTHO05D007813 3.2e-17 93.2 133 40.6
unitig_60.g25412 Utricularia gibba HOM05D006234 ORTHO05D007813 4.1e-17 92.8 131 39.7
Cfa019148 Carpinus fangiana HOM05D006234 ORTHO05D007813 5.4e-17 92.4 134 38.8
AUR62008196 Chenopodium quinoa HOM05D006234 ORTHO05D007813 5.4e-17 92.4 138 38.4
Sc10g0010120 Simmondsia chinensis HOM05D006234 ORTHO05D007813 5.4e-17 92.4 133 39.8
THA.LOC104809262 Tarenaya hassleriana HOM05D006234 ORTHO05D007813 5.4e-17 92.4 133 37.6
TPR.G37565 Trifolium pratense HOM05D006234 ORTHO05D007813 5.4e-17 92.4 133 39.1
PSO832G4587 Papaver somniferum HOM05D006234 ORTHO05D007813 7.1e-17 92.0 139 38.8
Sabra12G0058900 Salix brachista HOM05D006234 ORTHO05D007813 7.1e-17 92.0 133 39.1
Zm00001eb345780 Zea mays HOM05D006234 ORTHO05D007813 9.2e-17 91.7 139 38.8
Aqoxy3G02888 Aquilegia oxysepala HOM05D006234 ORTHO05D007813 1.2e-16 91.3 139 38.8
Os05g0170800 Oryza sativa ssp. japonica HOM05D006234 ORTHO05D007813 1.2e-16 91.3 139 38.8
PSO063G7211 Papaver somniferum HOM05D006234 ORTHO05D007813 1.2e-16 91.3 139 38.8
Haze_07514 Corylus avellana HOM05D006234 ORTHO05D007813 1.6e-16 90.9 134 38.1
Gohir.A12G274800 Gossypium hirsutum HOM05D006234 ORTHO05D007813 1.6e-16 90.9 133 38.3
Gohir.D12G275500 Gossypium hirsutum HOM05D006234 ORTHO05D007813 1.6e-16 90.9 133 38.3
Gorai.008G296000 Gossypium raimondii HOM05D006234 ORTHO05D007813 1.6e-16 90.9 133 38.3
PGR044G0892 Punica granatum HOM05D006234 ORTHO05D007813 1.6e-16 90.9 133 39.8
Thecc.03G014200 Theobroma cacao HOM05D006234 ORTHO05D007813 1.6e-16 90.9 133 38.3
Atru.chr9.2492 Acer truncatum HOM05D006234 ORTHO05D007813 2.1e-16 90.5 133 37.6
EL10Ac5g10733 Beta vulgaris HOM05D006234 ORTHO05D007813 2.1e-16 90.5 130 39.2
Ciclev10021475m.g Citrus clementina HOM05D006234 ORTHO05D007813 2.1e-16 90.5 133 39.1
MD14G1178600 Malus domestica HOM05D006234 ORTHO05D007813 2.1e-16 90.5 131 37.4
arahy.Tifrunner.gnm1.ann1.ZL3RZ2 Arachis hypogaea HOM05D006234 ORTHO05D007813 2.7e-16 90.1 131 38.2
CDE04G1656 Ceratophyllum demersum HOM05D006234 ORTHO05D007813 2.7e-16 90.1 138 36.2
Potri.015G078100 Populus trichocarpa HOM05D006234 ORTHO05D007813 3.5e-16 89.7 133 39.1
TAR629G2947 Trochodendron aralioides HOM05D006234 ORTHO05D007813 3.5e-16 89.7 139 36.7
AUR62030948 Chenopodium quinoa HOM05D006234 ORTHO05D007813 4.6e-16 89.4 138 37.7
COL.COLO4_30066 Corchorus olitorius HOM05D006234 ORTHO05D007813 4.6e-16 89.4 133 37.6
arahy.Tifrunner.gnm1.ann1.I5PLYK Arachis hypogaea HOM05D006234 ORTHO05D007813 6.0e-16 89.0 133 38.3
MSTRG.9679 Avicennia marina HOM05D006234 ORTHO05D007813 6.0e-16 89.0 134 40.3
CANSAT80G1835 Cannabis sativa HOM05D006234 ORTHO05D007813 6.0e-16 89.0 133 37.6
Nn4g22716 Nelumbo nucifera HOM05D006234 ORTHO05D007813 6.0e-16 89.0 139 37.4
Manes.14G064600 Manihot esculenta HOM05D006234 ORTHO05D007813 7.8e-16 88.6 133 37.6
QL10p010716 Quercus lobata HOM05D006234 ORTHO05D007813 7.8e-16 88.6 133 37.6
QL10p011029 Quercus lobata HOM05D006234 ORTHO05D007813 7.8e-16 88.6 133 37.6
Cpa.g.sc685.2 Carica papaya HOM05D006234 ORTHO05D007813 1.0e-15 88.2 133 37.6
Migut.O00096 Erythranthe guttata HOM05D006234 ORTHO05D007813 1.0e-15 88.2 133 38.3
Potri.012G082300 Populus trichocarpa HOM05D006234 ORTHO05D007813 1.0e-15 88.2 133 37.6
FvH4_5g05440 Fragaria vesca HOM05D006234 ORTHO05D007813 1.3e-15 87.8 131 35.9
FAN04G0097 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.3e-15 87.8 131 35.9
FAN08G0279 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.3e-15 87.8 131 35.9
FAN13G1809 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.3e-15 87.8 131 35.9
FAN18G0739 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.3e-15 87.8 131 35.9
RcHm_v2.0_Chr7g0193391 Rosa chinensis HOM05D006234 ORTHO05D007813 1.3e-15 87.8 131 35.9
Lalb_Chr13g0297731 Lupinus albus HOM05D006234 ORTHO05D007813 1.7e-15 87.4 180 32.8
Medtr4g105610 Medicago truncatula HOM05D006234 ORTHO05D007813 1.7e-15 87.4 262 29.0
Phvul.003G201500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 1.7e-15 87.4 133 37.6
Hund02751 Selenicereus undatus HOM05D006234 ORTHO05D007813 1.7e-15 87.4 132 37.9
SGA_v2.0_scaffold114G31825 Striga asiatica HOM05D006234 ORTHO05D007813 2.3e-15 87.0 138 34.8
HPP92_001303 Vanilla planifolia HOM05D006234 ORTHO05D007813 2.3e-15 87.0 139 38.8
Glyma.17G088400 Glycine max HOM05D006234 ORTHO05D007813 3.0e-15 86.7 133 37.6
CiPaw.12G027800 Carya illinoinensis HOM05D006234 ORTHO05D007813 5.1e-15 85.9 130 38.5
MELO3C002271.2 Cucumis melo HOM05D006234 ORTHO05D007813 5.1e-15 85.9 133 36.1
CsaV3_1G008570 Cucumis sativus L. HOM05D006234 ORTHO05D007813 5.1e-15 85.9 133 36.1
Sed0024030 Sechium edule HOM05D006234 ORTHO05D007813 6.6e-15 85.5 133 36.1
SGA_v2.0_scaffold90G27902 Striga asiatica HOM05D006234 ORTHO05D007813 6.6e-15 85.5 134 37.3
Glyma.05G038600 Glycine max HOM05D006234 ORTHO05D007813 8.6e-15 85.1 133 36.8
MD06G1172700 Malus domestica HOM05D006234 ORTHO05D007813 8.6e-15 85.1 131 35.9
FAN18G3270 Fragaria x ananassa HOM05D006234 ORTHO05D007813 1.1e-14 84.7 131 35.1
Zm00001eb124590 Zea mays HOM05D006234 ORTHO05D007813 1.1e-14 84.7 146 37.0
Actinidia19103 Actinidia chinensis HOM05D006234 ORTHO05D007813 2.5e-14 83.6 109 39.4
Glyma.06G181500 Glycine max HOM05D006234 ORTHO05D007813 7.3e-14 82.0 133 37.6
Lj4g0025683 Lotus japonicus HOM05D006234 ORTHO05D007813 9.5e-14 81.6 133 36.1
Duzib205G1984 Durio zibethinus HOM05D006234 ORTHO05D007813 1.6e-13 80.9 137 35.8
Glyma.04G184400 Glycine max HOM05D006234 ORTHO05D007813 2.1e-13 80.5 133 37.6
arahy.Tifrunner.gnm1.ann1.HN9NVD Arachis hypogaea HOM05D006234 ORTHO05D007813 2.8e-13 80.1 133 35.3
ClCG01G013210 Citrullus lanatus HOM05D006234 ORTHO05D007813 2.8e-13 80.1 128 35.2
SEGI_35494 Sequoiadendron giganteum HOM05D006234 ORTHO05D007813 2.8e-13 80.1 131 35.1
HanXRQChr05g0132691 Helianthus annuus HOM05D006234 ORTHO05D007813 4.7e-13 79.3 105 41.9
Lj1g0005957 Lotus japonicus HOM05D006234 ORTHO05D007813 6.2e-13 79.0 133 36.1
PGSC0003DMG401026661 Solanum tuberosum HOM05D006234 ORTHO05D007813 8.1e-13 78.6 166 30.7
Nn3g16823 Nelumbo nucifera HOM05D006234 ORTHO05D007813 4.0e-12 76.3 98 39.8
Sabra15G0102700 Salix brachista HOM05D006234 ORTHO05D007813 6.8e-12 75.5 155 32.9
MBI10_g27998_MAGBIO Magnolia biondii HOM05D006234 ORTHO05D007813 8.9e-12 75.1 104 40.4
CAN.G263.4 Capsicum annuum HOM05D006234 ORTHO05D007813 1.5e-11 74.3 151 32.5
Phvul.009G177500 Phaseolus vulgaris HOM05D006234 ORTHO05D007813 1.5e-11 74.3 180 30.6
TAR622G1324 Trochodendron aralioides HOM05D006234 ORTHO05D007813 2.0e-11 73.9 104 39.4
VMungo1309G2926 Vigna mungo HOM05D006234 ORTHO05D007813 3.4e-11 73.2 133 35.3
Manes.06G106000 Manihot esculenta HOM05D006234 ORTHO05D007813 9.9e-11 71.6 104 37.5
VMungo1215G2331 Vigna mungo HOM05D006234 ORTHO05D007813 1.3e-10 71.2 104 38.5
Pp3c21_1540 Physcomitrium patens HOM05D006234 ORTHO05D007813 2.4e-09 67.0 131 31.3
MCO05G167 Micromonas commoda HOM05D006234 ORTHO05D007813 1.6e-08 64.3 110 35.5


User provided reference genes

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