Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 1.6e-118 429.5 229 100.0
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 5.4e-29 132.1 170 44.1
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 2.5e-26 123.2 171 39.8
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 2.1e-25 120.2 175 38.3
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 6.2e-25 118.6 183 39.9
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 5.2e-24 115.5 170 39.4
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 5.2e-24 115.5 174 40.2
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 6.8e-24 115.2 170 38.8
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 8.9e-24 114.8 180 38.9
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 1.5e-23 114.0 170 38.8
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 1.5e-23 114.0 170 40.0
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 4.4e-23 112.5 175 39.4
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 4.4e-23 112.5 170 38.8
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 9.9e-23 111.3 170 37.1
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 9.9e-23 111.3 170 38.2
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 1.3e-22 110.9 169 37.3
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 1.7e-22 110.5 171 39.2
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 1.7e-22 110.5 171 38.6
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 2.2e-22 110.2 170 39.4
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 2.9e-22 109.8 165 37.6
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 2.9e-22 109.8 170 37.6
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 2.9e-22 109.8 183 36.6
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 3.7e-22 109.4 170 38.8
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 3.7e-22 109.4 170 38.8
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 4.9e-22 109.0 179 36.9
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 4.9e-22 109.0 170 38.2
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 6.4e-22 108.6 165 37.6
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 6.4e-22 108.6 170 35.3
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 8.3e-22 108.2 165 37.6
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 1.1e-21 107.8 170 37.6
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 1.1e-21 107.8 165 37.6
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 1.1e-21 107.8 165 37.6
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 1.1e-21 107.8 165 37.6
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 1.1e-21 107.8 170 38.2
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.1e-21 107.8 170 38.8
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.1e-21 107.8 170 38.8
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 1.4e-21 107.5 170 36.5
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 1.9e-21 107.1 170 37.1
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 1.9e-21 107.1 170 40.0
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 1.9e-21 107.1 170 36.5
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 3.2e-21 106.3 165 37.0
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 4.1e-21 105.9 165 37.0
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 4.1e-21 105.9 170 37.6
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 5.4e-21 105.5 181 36.5
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 5.4e-21 105.5 170 37.6
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 7.1e-21 105.1 170 35.9
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 9.2e-21 104.8 168 37.5
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 9.2e-21 104.8 170 37.6
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 9.2e-21 104.8 170 37.6
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 9.2e-21 104.8 170 37.6
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 9.2e-21 104.8 172 36.0
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 1.6e-20 104.0 171 37.4
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 1.6e-20 104.0 170 38.8
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 1.6e-20 104.0 170 35.9
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 1.6e-20 104.0 172 37.8
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 2.7e-20 103.2 165 36.4
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 2.7e-20 103.2 172 37.2
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 2.7e-20 103.2 170 38.2
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 2.7e-20 103.2 170 38.2
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 3.5e-20 102.8 172 37.2
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 3.5e-20 102.8 170 37.1
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 4.6e-20 102.4 170 36.5
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 4.6e-20 102.4 170 36.5
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 4.6e-20 102.4 165 36.4
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 4.6e-20 102.4 183 35.0
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 6.0e-20 102.1 170 36.5
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 6.0e-20 102.1 183 35.5
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 7.8e-20 101.7 170 36.5
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 7.8e-20 101.7 170 36.5
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 7.8e-20 101.7 170 35.3
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 7.8e-20 101.7 166 39.2
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 7.8e-20 101.7 166 39.2
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 1.0e-19 101.3 172 37.2
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 1.0e-19 101.3 172 36.0
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 1.0e-19 101.3 169 34.9
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 1.0e-19 101.3 161 36.6
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 1.3e-19 100.9 167 35.9
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 1.3e-19 100.9 166 39.2
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 5.1e-19 99.0 170 35.3
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 5.1e-19 99.0 170 35.3
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 5.1e-19 99.0 179 35.2
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 6.6e-19 98.6 166 37.3
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 8.6e-19 98.2 182 36.3
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 8.6e-19 98.2 170 34.1
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 1.5e-18 97.4 170 37.1
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 1.5e-18 97.4 159 39.0
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 3.3e-18 96.3 170 36.5
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 4.3e-18 95.9 170 38.8
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 9.6e-18 94.7 168 35.7
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 1.2e-17 94.4 162 39.5
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 1.1e-16 91.3 99 43.4
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 1.8e-16 90.5 189 33.3
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 2.4e-16 90.1 185 33.0
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 1.2e-15 87.8 156 32.1
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 1.5e-15 87.4 159 35.2
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 2.6e-15 86.7 161 32.3
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 3.4e-15 86.3 158 35.4
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 1.3e-14 84.3 148 37.2
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 1.1e-13 81.3 133 36.8
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 3.5e-12 76.3 175 34.3
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 6.0e-12 75.5 136 33.1
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 1.3e-11 74.3 133 36.8
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 6.6e-11 72.0 133 39.1
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 6.6e-11 72.0 153 35.9
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 1.1e-10 71.2 159 30.2
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 4.3e-10 69.3 133 37.6
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 2.8e-09 66.6 140 30.0
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 4.4e-07 59.3 127 32.3
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 8.4e-06 55.1 129 31.8


User provided reference genes

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