Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre08.g376450 Chlamydomonas reinhardtii HOM05D006501 ORTHO05D008241 1.1e-69 266.5 142 100.0
Sabra03G0099700 Salix brachista HOM05D006501 ORTHO05D003403 1.4e-38 163.3 115 70.4
PGR042G3674 Punica granatum HOM05D006501 ORTHO05D008241 2.3e-38 162.5 117 70.9
Atru.chr4.2141 Acer truncatum HOM05D006501 ORTHO05D008241 3.9e-38 161.8 106 74.5
Prupe.5G116900 Prunus persica HOM05D006501 ORTHO05D008241 8.8e-38 160.6 111 72.1
COL.COLO4_10671 Corchorus olitorius HOM05D006501 ORTHO05D008241 1.1e-37 160.2 117 67.5
Medtr8g099345 Medicago truncatula HOM05D006501 ORTHO05D008241 1.1e-37 160.2 114 70.2
Potri.003G138500 Populus trichocarpa HOM05D006501 ORTHO05D008241 1.5e-37 159.8 115 69.6
RcHm_v2.0_Chr7g0195201 Rosa chinensis HOM05D006501 ORTHO05D008241 1.5e-37 159.8 109 72.5
MD14G1122900 Malus domestica HOM05D006501 ORTHO05D008241 2.0e-37 159.5 112 71.4
PGSC0003DMG400005788 Solanum tuberosum HOM05D006501 ORTHO05D008241 2.6e-37 159.1 101 77.2
Ca_17489_v3 Cicer arietinum L. HOM05D006501 ORTHO05D008241 3.3e-37 158.7 116 68.1
Sopen08g004120 Solanum pennellii HOM05D006501 ORTHO05D008241 3.3e-37 158.7 106 73.6
Thecc.03G294700 Theobroma cacao HOM05D006501 ORTHO05D008241 3.3e-37 158.7 117 68.4
AL2G10510 Arabidopsis lyrata HOM05D006501 ORTHO05D008241 4.4e-37 158.3 108 72.2
Dinv37544 Davidia involucrata HOM05D006501 ORTHO05D008241 4.4e-37 158.3 112 68.8
Solyc08g008270.4 Solanum lycopersicum HOM05D006501 ORTHO05D008241 4.4e-37 158.3 101 76.2
BolC9t54619H Brassica oleracea HOM05D006501 ORTHO05D008241 5.7e-37 157.9 108 72.2
BraA09t37076Z Brassica rapa HOM05D006501 ORTHO05D008241 5.7e-37 157.9 108 72.2
Gohir.A08G100000 Gossypium hirsutum HOM05D006501 ORTHO05D008241 5.7e-37 157.9 110 69.1
HanXRQChr09g0256331 Helianthus annuus HOM05D006501 ORTHO05D008241 5.7e-37 157.9 111 68.5
Cc08_g15900 Coffea canephora HOM05D006501 ORTHO05D008241 7.4e-37 157.5 109 70.6
Gorai.004G134700 Gossypium raimondii HOM05D006501 ORTHO05D008241 7.4e-37 157.5 110 69.1
SEGI_07201 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 7.4e-37 157.5 104 74.0
HPP92_004586 Vanilla planifolia HOM05D006501 ORTHO05D000003 7.4e-37 157.5 113 70.8
AT1G64355 Arabidopsis thaliana HOM05D006501 ORTHO05D008241 9.7e-37 157.1 108 71.3
Lj4g0012209 Lotus japonicus HOM05D006501 ORTHO05D008241 9.7e-37 157.1 115 68.7
TPR.G3451 Trifolium pratense HOM05D006501 ORTHO05D008241 9.7e-37 157.1 112 69.6
Gohir.D08G131800 Gossypium hirsutum HOM05D006501 ORTHO05D008241 1.3e-36 156.8 110 69.1
Psat7g027120 Pisum sativum HOM05D006501 ORTHO05D008241 1.3e-36 156.8 100 76.0
unitig_46.g18618 Utricularia gibba HOM05D006501 ORTHO05D008241 1.3e-36 156.8 124 65.3
CSS0007891 Camellia sinensis var. sinensis HOM05D006501 ORTHO05D008241 1.7e-36 156.4 104 71.2
CAN.G792.46 Capsicum annuum HOM05D006501 ORTHO05D008241 1.7e-36 156.4 109 72.5
Manes.02G011600 Manihot esculenta HOM05D006501 ORTHO05D008241 1.7e-36 156.4 107 72.0
GSVIVG01019510001 Vitis vinifera HOM05D006501 ORTHO05D003403 2.2e-36 156.0 108 70.4
Glyma.05G215800 Glycine max HOM05D006501 ORTHO05D008241 2.8e-36 155.6 110 69.1
Sc01g0010190 Simmondsia chinensis HOM05D006501 ORTHO05D008241 2.8e-36 155.6 99 75.8
Eucgr.E00849 Eucalyptus grandis HOM05D006501 ORTHO05D008241 4.8e-36 154.8 106 71.7
Oeu009949.1 Olea europaea HOM05D006501 ORTHO05D008241 4.8e-36 154.8 115 66.1
Rhsim07G0083200 Rhododendron simsii HOM05D006501 ORTHO05D008241 4.8e-36 154.8 111 67.6
Sed0001613 Sechium edule HOM05D006501 ORTHO05D008241 4.8e-36 154.8 116 65.5
Aqoxy7G00141 Aquilegia oxysepala HOM05D006501 ORTHO05D008241 8.2e-36 154.1 106 69.8
Ciclev10022489m.g Citrus clementina HOM05D006501 ORTHO05D008241 8.2e-36 154.1 106 71.7
Phvul.002G297000 Phaseolus vulgaris HOM05D006501 ORTHO05D008241 8.2e-36 154.1 99 73.7
DCAR_005033 Daucus carota HOM05D006501 ORTHO05D008241 1.1e-35 153.7 117 67.5
Lalb_Chr05g0224191 Lupinus albus HOM05D006501 ORTHO05D008241 1.1e-35 153.7 105 71.4
Nn3g19061 Nelumbo nucifera HOM05D006501 ORTHO05D008241 1.1e-35 153.7 105 70.5
Peaxi162Scf00102g01748 Petunia axillaris HOM05D006501 ORTHO05D008241 1.1e-35 153.7 105 71.4
Hund11400 Selenicereus undatus HOM05D006501 ORTHO05D008241 1.1e-35 153.7 110 69.1
TWI60G0228 Tripterygium wilfordii HOM05D006501 ORTHO05D008241 1.1e-35 153.7 105 71.4
Hma1.2p1_0952F.1_g241030 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 1.4e-35 153.3 105 69.5
CANSAT21G0520 Cannabis sativa HOM05D006501 ORTHO05D008241 1.8e-35 152.9 101 71.3
VMungo0251G3563 Vigna mungo HOM05D006501 ORTHO05D008241 1.8e-35 152.9 110 67.3
Actinidia27329 Actinidia chinensis HOM05D006501 ORTHO05D008241 4.1e-35 151.8 116 64.7
Cfa022928 Carpinus fangiana HOM05D006501 ORTHO05D008241 4.1e-35 151.8 104 69.2
CDE10G1320 Ceratophyllum demersum HOM05D000199 ORTHO05D001448 4.1e-35 151.8 115 68.7
Sp2g00400 Schrenkiella parvula HOM05D006501 ORTHO05D008241 5.3e-35 151.4 126 61.9
Nitab4.5_0006656g0030 Nicotiana tabacum HOM05D006501 ORTHO05D008241 7.0e-35 151.0 120 67.5
THA.LOC104809338 Tarenaya hassleriana HOM05D006501 ORTHO05D008241 9.1e-35 150.6 119 65.5
MSTRG.25662 Avicennia marina HOM05D006501 ORTHO05D008241 2.0e-34 149.4 101 72.3
ClCG01G001980 Citrullus lanatus HOM05D006501 ORTHO05D008241 2.0e-34 149.4 126 62.7
Migut.A00672 Erythranthe guttata HOM05D006501 ORTHO05D008241 2.0e-34 149.4 130 60.8
CsaV3_5G002110 Cucumis sativus L. HOM05D006501 ORTHO05D008241 2.6e-34 149.1 126 62.7
COL.COLO4_10669 Corchorus olitorius HOM05D006501 ORTHO05D008241 3.5e-34 148.7 117 63.2
MD06G1104000 Malus domestica HOM05D006501 ORTHO05D008241 4.5e-34 148.3 115 66.1
MELO3C005743.2 Cucumis melo HOM05D006501 ORTHO05D008241 5.9e-34 147.9 126 62.7
AagrBONN_evm.TU.Sc2ySwM_362.747 Anthoceros agrestis HOM05D006501 ORTHO05D008241 2.9e-33 145.6 125 60.8
vmacro13905 Vaccinium macrocarpon HOM05D006501 ORTHO05D008241 3.8e-33 145.2 117 65.0
PSO135G1023 Papaver somniferum HOM05D006501 ORTHO05D008241 5.0e-33 144.8 100 71.0
PSO384G3305 Papaver somniferum HOM05D006501 ORTHO05D008241 5.0e-33 144.8 100 71.0
Actinidia22724 Actinidia chinensis HOM05D006501 ORTHO05D008241 6.5e-33 144.4 111 64.0
Duzib068G1433 Durio zibethinus HOM05D006501 ORTHO05D008241 8.5e-33 144.1 131 56.5
Pp3c8_24130 Physcomitrium patens HOM05D006501 ORTHO05D008241 1.1e-32 143.7 123 61.8
FAN04G2094 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.2e-32 142.1 109 67.9
FAN08G0187 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.2e-32 142.1 109 67.9
FAN13G2672 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.2e-32 142.1 109 67.9
FAN18G4356 Fragaria x ananassa HOM05D006501 ORTHO05D008241 3.2e-32 142.1 109 67.9
Duzib205G0456 Durio zibethinus HOM05D006501 ORTHO05D008241 1.2e-31 140.2 110 64.5
Migut.E01245 Erythranthe guttata HOM05D006501 ORTHO05D008241 1.6e-31 139.8 105 66.7
FAN18G2585 Fragaria x ananassa HOM05D006501 ORTHO05D008241 1.6e-31 139.8 109 67.0
BcaB07g31511 Brassica carinata HOM05D006501 ORTHO05D008241 2.1e-31 139.4 111 65.8
Mapoly0049s0020 Marchantia polymorpha HOM05D006501 ORTHO05D008241 2.7e-31 139.0 115 65.2
CiPaw.11G123100 Carya illinoinensis HOM05D006501 ORTHO05D008241 4.7e-31 138.3 104 66.3
BcaB07g31509 Brassica carinata HOM05D006501 ORTHO05D008241 6.1e-31 137.9 108 65.7
BcaC04g22628 Brassica carinata HOM05D006501 ORTHO05D008241 6.1e-31 137.9 108 65.7
A09p14290 Brassica napus HOM05D006501 ORTHO05D008241 6.1e-31 137.9 108 65.7
C09p17200 Brassica napus HOM05D006501 ORTHO05D008241 6.1e-31 137.9 108 65.7
arahy.Tifrunner.gnm1.ann1.68SH35 Arachis hypogaea HOM05D006501 ORTHO05D008241 8.0e-31 137.5 106 66.0
arahy.Tifrunner.gnm1.ann1.MC0I99 Arachis hypogaea HOM05D006501 ORTHO05D008241 8.0e-31 137.5 106 66.0
Aa31LG2G1320 Aethionema arabicum HOM05D005266 ORTHO05D006416 1.8e-30 136.3 108 64.8
Zm00001eb296420 Zea mays HOM05D006501 ORTHO05D008241 2.3e-30 136.0 118 62.7
Cpa.g.sc79.61 Carica papaya HOM05D006501 ORTHO05D008241 6.7e-30 134.4 106 65.1
MBI07_g24349_MAGBIO Magnolia biondii HOM05D006501 ORTHO05D008241 6.7e-30 134.4 116 60.3
Haze_08636 Corylus avellana HOM05D006501 ORTHO05D008241 1.5e-29 133.3 104 63.5
Lsat_1_v5_gn_6_12120 Lactuca sativa HOM05D006501 ORTHO05D008241 1.5e-29 133.3 105 62.9
Nitab4.5_0002944g0130 Nicotiana tabacum HOM05D006501 ORTHO05D008241 1.5e-29 133.3 120 62.5
SalBow1G7260 Salvia bowleyana HOM05D006501 ORTHO05D008241 3.3e-29 132.1 100 65.0
SalBow1G8172 Salvia bowleyana HOM05D006501 ORTHO05D008241 3.3e-29 132.1 100 65.0
SGA_v2.0_scaffold305G47943 Striga asiatica HOM05D006501 ORTHO05D008241 4.4e-29 131.7 106 63.2
Sed0024637 Sechium edule HOM05D006501 ORTHO05D008241 9.7e-29 130.6 109 57.8
TAR374G1465 Trochodendron aralioides HOM05D006501 ORTHO05D008241 6.3e-28 127.9 121 57.9
TAR374G0759 Trochodendron aralioides HOM05D006501 ORTHO05D008241 8.2e-28 127.5 121 57.9
Atru.chr9.2018 Acer truncatum HOM05D006501 ORTHO05D008241 8.5e-25 117.5 115 56.5
Zm00001eb150250 Zea mays HOM05D006501 ORTHO05D008241 3.2e-24 115.5 117 58.1
Hma1.2p1_0952F.1_g241020 Hydrangea macrophylla HOM05D006501 ORTHO05D008241 2.3e-22 109.4 105 55.2
SalBow8G4809 Salvia bowleyana HOM05D006501 ORTHO05D008241 5.2e-22 108.2 138 47.8
BcaC04g22630 Brassica carinata HOM05D006501 ORTHO05D008241 6.8e-22 107.8 89 66.3
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 1.3e-20 103.6 87 62.1
Carub.0002s0043 Capsella rubella HOM05D006501 ORTHO05D008241 4.5e-18 95.1 66 71.2
CBR_g30621 Chara braunii HOM05D006501 ORTHO05D008241 4.5e-18 95.1 68 66.2
Thhalv10023703m.g Eutrema salsugineum HOM05D006501 ORTHO05D008241 4.5e-18 95.1 66 71.2
CARHR046590 Cardamine hirsuta HOM05D006501 ORTHO05D008241 5.9e-18 94.7 66 71.2
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 1.7e-17 93.2 116 55.2
SEGI_03665 Sequoiadendron giganteum HOM05D006501 ORTHO05D008241 8.6e-17 90.9 59 72.9
Potri.001G093001 Populus trichocarpa HOM05D006501 ORTHO05D008241 1.1e-16 90.5 74 63.5
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 1.0e-14 84.0 110 46.4
FvH4_5g04360 Fragaria vesca HOM05D006501 ORTHO05D008241 1.4e-14 83.6 60 70.0
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 2.3e-14 82.8 104 47.1
QL02p031049 Quercus lobata HOM05D006501 ORTHO05D008241 6.8e-14 81.3 53 71.7
EL10Ac5g12897 Beta vulgaris HOM05D006501 ORTHO05D008241 8.9e-14 80.9 53 71.7
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 2.6e-13 79.3 53 69.8
AUR62019819 Chenopodium quinoa HOM05D006501 ORTHO05D008241 2.6e-13 79.3 53 69.8
Ah.12g052370 Amaranthus hybridus HOM05D006501 ORTHO05D008241 3.4e-13 79.0 53 69.8
Ah.12g052380 Amaranthus hybridus HOM05D006501 ORTHO05D008241 3.4e-13 79.0 60 61.7
ECA233G1307 Erigeron canadensis HOM05D006501 ORTHO05D008241 9.8e-13 77.4 67 61.2
SGA_v2.0_scaffold144G35857 Striga asiatica HOM05D006501 ORTHO05D008241 3.7e-12 75.5 125 41.6
PRCOL_00002728 Prasinoderma coloniale HOM05D005851 ORTHO05D049091 4.5e-10 68.6 104 42.3
Lj2C170T10 Lonicera japonica HOM05D006501 ORTHO05D008241 1.0e-09 67.4 47 68.1
RcHm_v2.0_Chr6g0301591 Rosa chinensis HOM05D001075 ORTHO05D008241 2.9e-09 65.9 59 55.9
Atru.chr9.2021 Acer truncatum HOM05D006501 ORTHO05D008241 2.8e-07 59.3 54 55.6


User provided reference genes

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