Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre08.g375900 Chlamydomonas reinhardtii HOM05D005198 ORTHO05D006839 0.0e+00 1161.4 618 100.0
CBR_g53754 Chara braunii HOM05D005198 ORTHO05D006839 1.0e-90 338.6 654 37.2
Pp3c6_14240 Physcomitrium patens HOM05D005198 ORTHO05D006839 2.1e-88 330.9 530 39.1
SMO145G0177 Selaginella moellendorffii HOM05D005198 ORTHO05D006839 1.8e-87 327.8 616 36.5
Mapoly0011s0080 Marchantia polymorpha HOM05D005198 ORTHO05D006839 2.4e-87 327.4 455 40.9
MCO01G167 Micromonas commoda HOM05D005198 ORTHO05D006839 2.6e-78 297.4 546 35.9
PSO732G0749 Papaver somniferum HOM05D005198 ORTHO05D006839 5.5e-76 289.7 538 35.7
PSO675G4502 Papaver somniferum HOM05D005198 ORTHO05D006839 1.2e-75 288.5 536 35.6
PRCOL_00000684 Prasinoderma coloniale HOM05D005198 ORTHO05D006839 6.0e-75 286.2 627 33.3
Lj1g0021010 Lotus japonicus HOM05D005198 ORTHO05D006839 3.9e-74 283.5 462 35.7
PGR142G0872 Punica granatum HOM05D005198 ORTHO05D006839 2.5e-73 280.8 484 36.0
Ciclev10019752m.g Citrus clementina HOM05D005198 ORTHO05D006839 1.6e-72 278.1 440 37.3
Medtr4g087280 Medicago truncatula HOM05D005198 ORTHO05D006839 2.1e-72 277.7 503 34.0
ClCG07G015220 Citrullus lanatus HOM05D005198 ORTHO05D006839 2.8e-72 277.3 461 36.7
MD15G1424000 Malus domestica HOM05D005198 ORTHO05D006839 3.7e-72 276.9 548 34.5
GSVIVG01038139001 Vitis vinifera HOM05D005198 ORTHO05D006839 4.8e-72 276.6 487 36.8
Psat7g121400 Pisum sativum HOM05D005198 ORTHO05D006839 6.2e-72 276.2 501 34.7
RcHm_v2.0_Chr2g0123631 Rosa chinensis HOM05D005198 ORTHO05D006839 6.2e-72 276.2 483 36.0
Lj4A14T50 Lonicera japonica HOM05D005198 ORTHO05D006839 8.2e-72 275.8 428 38.6
Glyma.07G208200 Glycine max HOM05D005198 ORTHO05D006839 1.1e-71 275.4 483 36.0
ATR0733G245 Amborella trichopoda HOM05D005198 ORTHO05D006839 1.4e-71 275.0 480 36.7
FAN28G0627 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.8e-71 274.6 464 35.6
Rhsim04G0106800 Rhododendron simsii HOM05D005198 ORTHO05D006839 3.1e-71 273.9 483 35.4
Carub.0002s1997 Capsella rubella HOM05D005198 ORTHO05D006839 4.0e-71 273.5 458 35.6
AT1G73180 Arabidopsis thaliana HOM05D005198 ORTHO05D006839 5.3e-71 273.1 459 36.4
CAN.G1411.3 Capsicum annuum HOM05D005198 ORTHO05D006839 6.9e-71 272.7 462 35.3
Aa31LG4G3470 Aethionema arabicum HOM05D005198 ORTHO05D006839 9.0e-71 272.3 493 33.3
Solyc08g014060.4 Solanum lycopersicum HOM05D005198 ORTHO05D006839 9.0e-71 272.3 469 35.8
Aqoxy2G02750 Aquilegia oxysepala HOM05D005198 ORTHO05D006839 1.2e-70 271.9 497 34.8
CARHR066180 Cardamine hirsuta HOM05D005198 ORTHO05D006839 1.5e-70 271.6 439 36.0
arahy.Tifrunner.gnm1.ann1.Q28JUU Arachis hypogaea HOM05D005198 ORTHO05D006839 2.0e-70 271.2 516 34.1
arahy.Tifrunner.gnm1.ann1.A4X0ZB Arachis hypogaea HOM05D005198 ORTHO05D006839 2.6e-70 270.8 491 35.4
CANSAT11G2028 Cannabis sativa HOM05D005198 ORTHO05D006839 2.6e-70 270.8 540 35.4
Sed0009334 Sechium edule HOM05D005198 ORTHO05D006839 2.6e-70 270.8 462 37.2
Sopen08g004940 Solanum pennellii HOM05D005198 ORTHO05D006839 2.6e-70 270.8 473 35.1
A07p29920 Brassica napus HOM05D005198 ORTHO05D006839 3.4e-70 270.4 437 36.6
C06p34190 Brassica napus HOM05D005198 ORTHO05D006839 3.4e-70 270.4 437 36.2
Lalb_Chr09g0328121 Lupinus albus HOM05D005198 ORTHO05D006839 5.8e-70 269.6 486 35.6
TPR.G23517 Trifolium pratense HOM05D005198 ORTHO05D006839 5.8e-70 269.6 484 34.9
Manes.04G036150 Manihot esculenta HOM05D005198 ORTHO05D006839 7.6e-70 269.2 459 36.2
HanXRQChr15g0483441 Helianthus annuus HOM05D005198 ORTHO05D006839 1.0e-69 268.9 428 37.1
Eucgr.H00311 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.3e-69 268.5 500 34.2
AL2G32950 Arabidopsis lyrata HOM05D005198 ORTHO05D006839 1.7e-69 268.1 459 35.5
Sabra13G0105600 Salix brachista HOM05D005198 ORTHO05D006839 2.2e-69 267.7 455 36.5
Gorai.005G012500 Gossypium raimondii HOM05D005198 ORTHO05D006839 2.9e-69 267.3 429 37.8
BraA07t30630Z Brassica rapa HOM05D005198 ORTHO05D006839 3.8e-69 266.9 438 36.3
Potri.013G126300 Populus trichocarpa HOM05D005198 ORTHO05D006839 3.8e-69 266.9 440 35.9
Sp5g28150 Schrenkiella parvula HOM05D005198 ORTHO05D006839 3.8e-69 266.9 437 35.9
Actinidia28982 Actinidia chinensis HOM05D005198 ORTHO05D006839 4.9e-69 266.5 482 34.6
Thhalv10018413m.g Eutrema salsugineum HOM05D005198 ORTHO05D006839 4.9e-69 266.5 479 35.9
Gohir.A02G009975 Gossypium hirsutum HOM05D005198 ORTHO05D006839 6.5e-69 266.2 429 37.8
Ah.13g073540 Amaranthus hybridus HOM05D005198 ORTHO05D006839 8.4e-69 265.8 446 35.9
Glyma.02G137200 Glycine max HOM05D005198 ORTHO05D006839 8.4e-69 265.8 481 34.9
BolC6t38540H Brassica oleracea HOM05D005198 ORTHO05D006839 1.1e-68 265.4 454 35.0
MELO3C017760.2 Cucumis melo HOM05D005198 ORTHO05D006839 1.1e-68 265.4 461 35.8
VMungo0251G3269 Vigna mungo HOM05D005198 ORTHO05D006839 1.4e-68 265.0 499 33.3
Oeu020813.1 Olea europaea HOM05D005198 ORTHO05D006839 1.9e-68 264.6 497 34.8
Prupe.1G207000 Prunus persica HOM05D005198 ORTHO05D006839 1.9e-68 264.6 499 35.1
Zm00001eb246620 Zea mays HOM05D005198 ORTHO05D006839 2.5e-68 264.2 541 34.6
ECA232G1195 Erigeron canadensis HOM05D005198 ORTHO05D006839 3.2e-68 263.8 462 35.3
Phvul.003G296400 Phaseolus vulgaris HOM05D005198 ORTHO05D006839 3.2e-68 263.8 480 34.6
Hma1.2p1_0150F.1_g066860 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 4.2e-68 263.5 482 35.1
Migut.G01222 Erythranthe guttata HOM05D005198 ORTHO05D006839 5.5e-68 263.1 443 36.1
TWI63G1273 Tripterygium wilfordii HOM05D005198 ORTHO05D006839 5.5e-68 263.1 540 33.5
Gohir.D02G010200 Gossypium hirsutum HOM05D005198 ORTHO05D006839 2.7e-67 260.8 429 37.1
TAR365G0102 Trochodendron aralioides HOM05D005198 ORTHO05D006839 2.7e-67 260.8 498 33.3
AUR62002390 Chenopodium quinoa HOM05D005198 ORTHO05D006839 6.1e-67 259.6 504 33.3
Cc03_g14040 Coffea canephora HOM05D005198 ORTHO05D006839 7.9e-67 259.2 499 34.1
Thecc.01G302200 Theobroma cacao HOM05D005198 ORTHO05D006839 7.9e-67 259.2 479 35.3
FAN26G1320 Fragaria x ananassa HOM05D005198 ORTHO05D006839 1.0e-66 258.8 395 38.0
QL10p055731 Quercus lobata HOM05D005198 ORTHO05D006839 5.1e-66 256.5 490 33.3
THA.LOC104813938 Tarenaya hassleriana HOM05D005198 ORTHO05D006839 1.1e-65 255.4 458 35.2
Duzib151G0783 Durio zibethinus HOM05D005198 ORTHO05D006839 1.5e-65 255.0 425 37.6
SEGI_32957 Sequoiadendron giganteum HOM05D005198 ORTHO05D006839 1.5e-65 255.0 296 44.9
Dinv07059 Davidia involucrata HOM05D005198 ORTHO05D006839 1.9e-65 254.6 485 33.6
Nitab4.5_0000122g0140 Nicotiana tabacum HOM05D005198 ORTHO05D006839 6.3e-64 249.6 436 34.9
CsaV3_4G002810 Cucumis sativus L. HOM05D005198 ORTHO05D006839 1.4e-63 248.4 489 33.9
CDE04G2667 Ceratophyllum demersum HOM05D005198 ORTHO05D006839 2.4e-63 247.7 523 32.5
Atru.BG.83.p Acer truncatum HOM05D005198 ORTHO05D006839 9.0e-63 245.7 479 34.0
COL.COLO4_23329 Corchorus olitorius HOM05D005198 ORTHO05D006839 9.0e-63 245.7 414 36.2
SalBow3G0226 Salvia bowleyana HOM05D005198 ORTHO05D006839 2.6e-62 244.2 454 33.3
Cpa.g.sc9.361 Carica papaya HOM05D005198 ORTHO05D006839 3.4e-62 243.8 456 35.3
Lsat_1_v5_gn_9_61481 Lactuca sativa HOM05D005198 ORTHO05D006839 7.7e-62 242.7 436 33.9
Hma1.2p1_0150F.1_g066870 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 8.5e-61 239.2 395 37.2
CiPaw.02G100600 Carya illinoinensis HOM05D005198 ORTHO05D006839 5.5e-60 236.5 353 37.7
Dinv33201 Davidia involucrata HOM05D005198 ORTHO05D006839 6.1e-59 233.0 358 38.0
Nn1g09646 Nelumbo nucifera HOM05D005198 ORTHO05D006839 1.0e-58 232.3 370 38.1
BcaC08g45664 Brassica carinata HOM05D005198 ORTHO05D006839 1.8e-58 231.5 440 34.8
Haze_01365 Corylus avellana HOM05D005198 ORTHO05D006839 1.8e-58 231.5 518 31.3
Hund03196 Selenicereus undatus HOM05D005198 ORTHO05D006839 1.5e-57 228.4 498 31.3
Sc25g0002780 Simmondsia chinensis HOM05D005198 ORTHO05D006839 3.3e-57 227.3 347 37.5
Eucgr.L01724 Eucalyptus grandis HOM05D005198 ORTHO05D006839 1.8e-55 221.5 461 30.6
AUR62023798 Chenopodium quinoa HOM05D005198 ORTHO05D006839 4.1e-55 220.3 488 31.6
Ca_25383_v3 Cicer arietinum L. HOM05D005198 ORTHO05D006839 2.6e-54 217.6 267 43.4
FvH4_1g25500 Fragaria vesca HOM05D005198 ORTHO05D006839 3.6e-51 207.2 464 31.9
Peaxi162Scf00075g01544 Petunia axillaris HOM05D005198 ORTHO05D006839 3.0e-50 204.1 455 32.3
vmacro09048 Vaccinium macrocarpon HOM05D005198 ORTHO05D006839 2.6e-49 201.1 333 36.0
Lalb_Chr16g0384461 Lupinus albus HOM05D005198 ORTHO05D006839 1.1e-47 195.7 299 37.1
Nitab4.5_0011921g0010 Nicotiana tabacum HOM05D005198 ORTHO05D006839 4.1e-47 193.7 443 31.6
FAN23G1744 Fragaria x ananassa HOM05D005198 ORTHO05D006839 5.0e-45 186.8 532 29.9
unitig_92.g28215 Utricularia gibba HOM05D005198 ORTHO05D006839 6.5e-45 186.4 294 36.4
FAN19G2119 Fragaria x ananassa HOM05D005198 ORTHO05D006839 2.5e-44 184.5 517 29.8
SGA_v2.0_scaffold12G06184 Striga asiatica HOM05D005198 ORTHO05D006839 1.4e-42 178.7 464 30.6
CSS0046337 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 2.6e-38 164.5 502 27.3
SHI30329 Sapria himalayana HOM05D005198 ORTHO05D000023 3.8e-37 160.6 282 35.8
AagrBONN_evm.TU.Sc2ySwM_228.1363 Anthoceros agrestis HOM05D005198 ORTHO05D006839 8.5e-37 159.5 298 35.6
EL10Ac3g06083 Beta vulgaris HOM05D005198 ORTHO05D006839 4.8e-32 143.7 299 31.8
DCAR_027527 Daucus carota HOM05D005198 ORTHO05D006839 6.3e-32 143.3 260 35.4
CSS0050366 Camellia sinensis var. sinensis HOM05D005198 ORTHO05D006839 3.8e-29 134.0 395 29.1
MBI11_g23940_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 5.0e-29 133.7 293 33.1
Lj3g0007177 Lotus japonicus HOM05D005198 ORTHO05D006839 1.1e-28 132.5 201 37.3
Lj6g0012253 Lotus japonicus HOM05D005198 ORTHO05D006839 1.1e-28 132.5 201 37.3
Eucgr.H00310 Eucalyptus grandis HOM05D005198 ORTHO05D006839 2.0e-25 121.7 293 28.7
Hma1.2p1_0554F.1_g177930 Hydrangea macrophylla HOM05D005198 ORTHO05D006839 2.6e-25 121.3 300 32.0
Atru.chr4.1402 Acer truncatum HOM05D005198 ORTHO05D006839 3.7e-24 117.5 261 31.0
Nitab4.5_0009616g0020 Nicotiana tabacum HOM05D005198 ORTHO05D006839 4.9e-16 90.5 102 47.1
MBI14_g40932_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.2e-09 69.3 101 41.6
Lalb_Chr16g0384471 Lupinus albus HOM05D005198 ORTHO05D006839 2.0e-09 68.6 124 35.5
unitig_92.g28214 Utricularia gibba HOM05D005198 ORTHO05D006839 5.8e-09 67.0 111 35.1
SGA_v2.0_scaffold130G34334 Striga asiatica HOM05D005198 ORTHO05D006839 1.4e-07 62.4 65 41.5
MBI11_g23941_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 4.1e-07 60.8 133 30.1
MBI03_g14783_MAGBIO Magnolia biondii HOM05D005198 ORTHO05D006839 1.6e-06 58.9 70 44.3
DCAR_027526 Daucus carota HOM05D005198 ORTHO05D006839 3.5e-06 57.8 184 29.9


User provided reference genes

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