Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre08.g375650 Chlamydomonas reinhardtii HOM05D006210 ORTHO05D007510 1.7e-221 772.3 389 100.0
PRCOL_00004543 Prasinoderma coloniale HOM05D006210 ORTHO05D007510 1.1e-53 214.9 365 36.4
Mapoly0012s0146 Marchantia polymorpha HOM05D006210 ORTHO05D007510 1.6e-49 201.1 363 35.8
Thhalv10008004m.g Eutrema salsugineum HOM05D006210 ORTHO05D007510 5.0e-43 179.5 368 32.3
CARHR003480 Cardamine hirsuta HOM05D006210 ORTHO05D007510 7.2e-42 175.6 364 31.9
MSTRG.22887 Avicennia marina HOM05D006210 ORTHO05D007510 1.6e-41 174.5 325 34.2
Eucgr.A01369 Eucalyptus grandis HOM05D006210 ORTHO05D007510 1.6e-41 174.5 349 32.7
AT1G04130 Arabidopsis thaliana HOM05D006210 ORTHO05D007510 6.1e-41 172.6 364 31.6
CiPaw.03G272200 Carya illinoinensis HOM05D006210 ORTHO05D007510 1.4e-40 171.4 343 33.5
TWI18G1043 Tripterygium wilfordii HOM05D006210 ORTHO05D007510 3.0e-40 170.2 337 35.0
Sed0025577 Sechium edule HOM05D006210 ORTHO05D007510 4.0e-40 169.9 373 31.4
AL1G13730 Arabidopsis lyrata HOM05D006210 ORTHO05D007510 5.2e-40 169.5 365 30.7
Ciclev10020743m.g Citrus clementina HOM05D006210 ORTHO05D007510 5.2e-40 169.5 370 33.2
FvH4_2g20260 Fragaria vesca HOM05D006210 ORTHO05D007510 5.2e-40 169.5 334 32.9
Nn1g03023 Nelumbo nucifera HOM05D006210 ORTHO05D007510 1.5e-39 167.9 363 31.4
Hund18317 Selenicereus undatus HOM05D006210 ORTHO05D007510 1.5e-39 167.9 351 31.1
TAR362G1053 Trochodendron aralioides HOM05D006210 ORTHO05D007510 2.6e-39 167.2 328 32.6
Carub.0001s0328 Capsella rubella HOM05D006210 ORTHO05D007510 9.8e-39 165.2 365 30.1
Gohir.D11G140400 Gossypium hirsutum HOM05D006210 ORTHO05D007510 9.8e-39 165.2 328 33.8
MCO01G218 Micromonas commoda HOM05D006210 ORTHO05D007510 9.8e-39 165.2 374 32.9
Potri.002G255300 Populus trichocarpa HOM05D006210 ORTHO05D007510 9.8e-39 165.2 323 31.3
Sp1g02950 Schrenkiella parvula HOM05D006210 ORTHO05D007510 9.8e-39 165.2 367 30.5
CsaV3_3G028470 Cucumis sativus L. HOM05D006210 ORTHO05D007510 1.3e-38 164.9 348 31.9
PGR031G0293 Punica granatum HOM05D006210 ORTHO05D007510 1.3e-38 164.9 332 30.7
Manes.13G038600 Manihot esculenta HOM05D006210 ORTHO05D007510 2.8e-38 163.7 364 29.9
Thecc.01G247800 Theobroma cacao HOM05D006210 ORTHO05D007510 3.7e-38 163.3 328 31.7
PSO210G7683 Papaver somniferum HOM05D006210 ORTHO05D007510 4.9e-38 162.9 364 33.0
GSVIVG01028451001 Vitis vinifera HOM05D006210 ORTHO05D007510 4.9e-38 162.9 344 32.3
Gohir.A11G134300 Gossypium hirsutum HOM05D006210 ORTHO05D007510 6.3e-38 162.5 328 33.2
Hma1.2p1_2051F.1_g312580 Hydrangea macrophylla HOM05D006210 ORTHO05D007510 8.3e-38 162.2 348 30.5
Actinidia30115 Actinidia chinensis HOM05D006210 ORTHO05D007510 1.4e-37 161.4 340 31.2
CANSAT01G0995 Cannabis sativa HOM05D006210 ORTHO05D007510 3.1e-37 160.2 358 29.9
Zm00001eb057360 Zea mays HOM05D006210 ORTHO05D007510 3.1e-37 160.2 351 32.5
MELO3C012833.2 Cucumis melo HOM05D006210 ORTHO05D007510 4.1e-37 159.8 347 31.1
THA.LOC104801120 Tarenaya hassleriana HOM05D006210 ORTHO05D007510 4.1e-37 159.8 367 30.5
Aa31LG1G20710 Aethionema arabicum HOM05D006210 ORTHO05D007510 7.0e-37 159.1 374 29.9
Duzib138G0227 Durio zibethinus HOM05D006210 ORTHO05D007510 7.0e-37 159.1 308 34.7
PSO170G6901 Papaver somniferum HOM05D006210 ORTHO05D007510 7.0e-37 159.1 364 32.4
Rhsim13G0040700 Rhododendron simsii HOM05D006210 ORTHO05D007510 7.0e-37 159.1 349 30.1
BraA09t42139Z Brassica rapa HOM05D006210 ORTHO05D007510 1.6e-36 157.9 329 31.0
Glyma.13G127800 Glycine max HOM05D006210 ORTHO05D007510 1.6e-36 157.9 338 30.2
CSS0033273 Camellia sinensis var. sinensis HOM05D006210 ORTHO05D007510 2.0e-36 157.5 383 31.9
Migut.O00355 Erythranthe guttata HOM05D006210 ORTHO05D007510 2.7e-36 157.1 336 30.1
Atru.chr5.2084_Atru.chr5.2085 Acer truncatum HOM05D006210 ORTHO05D007510 3.5e-36 156.8 343 31.5
Ca_09640_v3 Cicer arietinum L. HOM05D006210 ORTHO05D007510 3.5e-36 156.8 340 30.6
ECA247G1810 Erigeron canadensis HOM05D006210 ORTHO05D007510 4.5e-36 156.4 300 31.0
Psat6g064440 Pisum sativum HOM05D006210 ORTHO05D007510 4.5e-36 156.4 365 30.1
Aqoxy5G00102 Aquilegia oxysepala HOM05D006210 ORTHO05D007510 5.9e-36 156.0 340 30.6
MBI10_g26060_MAGBIO Magnolia biondii HOM05D006210 ORTHO05D007510 5.9e-36 156.0 370 30.8
PGSC0003DMG400007719 Solanum tuberosum HOM05D006210 ORTHO05D007510 1.0e-35 155.2 319 33.9
Ah.15g091520 Amaranthus hybridus HOM05D006210 ORTHO05D007510 1.3e-35 154.8 326 32.5
Lj1C76G7 Lonicera japonica HOM05D006210 ORTHO05D007510 1.3e-35 154.8 360 31.4
Prupe.1G573100 Prunus persica HOM05D006210 ORTHO05D007510 1.3e-35 154.8 342 30.7
SalBow5G1930 Salvia bowleyana HOM05D006210 ORTHO05D007510 1.3e-35 154.8 357 29.4
Phvul.007G154100 Phaseolus vulgaris HOM05D006210 ORTHO05D007510 2.3e-35 154.1 364 29.7
Pp3c19_11990 Physcomitrium patens HOM05D006210 ORTHO05D007510 2.3e-35 154.1 359 29.8
QL09p042418 Quercus lobata HOM05D006210 ORTHO05D007510 2.3e-35 154.1 357 31.7
BcaC07g42211 Brassica carinata HOM05D006210 ORTHO05D007510 3.8e-35 153.3 370 30.3
Sopen09g025510 Solanum pennellii HOM05D006210 ORTHO05D007510 6.6e-35 152.5 349 32.1
Dinv43053 Davidia involucrata HOM05D006210 ORTHO05D007510 1.9e-34 151.0 334 32.0
BolC8t52775H Brassica oleracea HOM05D006210 ORTHO05D007510 2.5e-34 150.6 334 29.9
Cfa002496 Carpinus fangiana HOM05D006210 ORTHO05D007510 2.5e-34 150.6 317 31.9
A09p68040 Brassica napus HOM05D006210 ORTHO05D007510 5.6e-34 149.4 308 31.2
unitig_22.g6263 Utricularia gibba HOM05D006210 ORTHO05D007510 5.6e-34 149.4 359 29.8
Glyma.10G040900 Glycine max HOM05D006210 ORTHO05D007510 7.2e-34 149.1 364 29.4
SEGI_04783 Sequoiadendron giganteum HOM05D006210 ORTHO05D007510 9.5e-34 148.7 344 31.1
TPR.G28794 Trifolium pratense HOM05D006210 ORTHO05D007510 9.5e-34 148.7 331 30.2
ClCG00G001600 Citrullus lanatus HOM05D006210 ORTHO05D007510 2.8e-33 147.1 339 31.6
AagrBONN_evm.TU.Sc2ySwM_228.4049__4050 Anthoceros agrestis HOM05D006210 ORTHO05D007510 3.6e-33 146.7 268 35.8
Lj5g0001397 Lotus japonicus HOM05D006210 ORTHO05D007510 8.0e-33 145.6 366 29.5
SGA_v2.0_scaffold382G50403 Striga asiatica HOM05D006210 ORTHO05D007510 8.0e-33 145.6 324 29.6
C08p52480 Brassica napus HOM05D006210 ORTHO05D007510 2.3e-32 144.1 308 30.2
CBR_g36953 Chara braunii HOM05D006210 ORTHO05D007510 5.2e-32 142.9 289 34.3
HanXRQChr10g0280241 Helianthus annuus HOM05D006210 ORTHO05D007510 8.9e-32 142.1 343 28.6
Peaxi162Scf00043g00235 Petunia axillaris HOM05D006210 ORTHO05D007510 5.7e-31 139.4 309 31.4
FAN27G1100 Fragaria x ananassa HOM05D006210 ORTHO05D007510 9.8e-31 138.7 334 29.6
Oeu058104.1 Olea europaea HOM05D006210 ORTHO05D007510 9.8e-31 138.7 344 29.4
Nitab4.5_0000385g0060 Nicotiana tabacum HOM05D006210 ORTHO05D007510 3.7e-30 136.7 345 30.4
Lalb_Chr21g0314151 Lupinus albus HOM05D006210 ORTHO05D007510 6.4e-30 136.0 352 28.4
arahy.Tifrunner.gnm1.ann1.J3R5E0 Arachis hypogaea HOM05D006210 ORTHO05D007510 5.4e-29 132.9 306 30.4
AUR62025420 Chenopodium quinoa HOM05D006210 ORTHO05D007510 1.2e-28 131.7 330 28.8
VMungo0720G2771 Vigna mungo HOM05D006210 ORTHO05D007510 4.6e-28 129.8 365 27.4
BcaC07g42208 Brassica carinata HOM05D006210 ORTHO05D007510 1.0e-27 128.6 374 29.1
Haze_24722 Corylus avellana HOM05D006210 ORTHO05D007510 1.3e-27 128.3 335 29.9
COL.COLO4_37372 Corchorus olitorius HOM05D006210 ORTHO05D007510 1.1e-26 125.2 331 29.0
arahy.Tifrunner.gnm1.ann1.6WB007 Arachis hypogaea HOM05D006210 ORTHO05D007510 9.5e-26 122.1 366 27.9
Cc01_g17680 Coffea canephora HOM05D006210 ORTHO05D007510 1.0e-24 118.6 343 26.5
Sabra02G0194000 Salix brachista HOM05D006210 ORTHO05D007510 1.0e-24 118.6 347 26.5
CAN.G119.7 Capsicum annuum HOM05D006210 ORTHO05D007510 1.2e-23 115.2 235 34.5
arahy.Tifrunner.gnm1.ann1.GM89QY Arachis hypogaea HOM05D006210 ORTHO05D007510 9.8e-23 112.1 297 28.3
AUR62008821 Chenopodium quinoa HOM05D006210 ORTHO05D007510 6.4e-22 109.4 304 28.6
MD10G1174300 Malus domestica HOM05D006210 ORTHO05D007510 1.1e-21 108.6 211 33.2
Solyc09g064380.3 Solanum lycopersicum HOM05D006210 ORTHO05D007510 3.2e-21 107.1 194 34.5
Cpa.g.sc87.54 Carica papaya HOM05D006210 ORTHO05D007510 1.6e-20 104.8 234 30.3
Hma1.2p1_2051F.1_g312575 Hydrangea macrophylla HOM05D006210 ORTHO05D007510 2.7e-20 104.0 225 30.7
ATR0723G059 Amborella trichopoda HOM05D006210 ORTHO05D007510 3.5e-20 103.6 331 27.8
FAN24G1818 Fragaria x ananassa HOM05D006210 ORTHO05D007510 3.5e-20 103.6 213 33.3
RcHm_v2.0_Chr6g0286041 Rosa chinensis HOM05D006210 ORTHO05D007510 7.8e-20 102.4 213 33.3
arahy.Tifrunner.gnm1.ann1.5C4SPF Arachis hypogaea HOM05D006210 ORTHO05D007510 3.0e-19 100.5 211 29.9
DCAR_000557 Daucus carota HOM05D006210 ORTHO05D007510 7.3e-18 95.9 232 30.6
ClCG07G001460 Citrullus lanatus HOM05D006210 ORTHO05D007510 3.6e-17 93.6 219 33.8
Nitab4.5_0000392g0100 Nicotiana tabacum HOM05D006210 ORTHO05D007510 6.2e-17 92.8 296 26.0
Lsat_1_v5_gn_9_11700 Lactuca sativa HOM05D006210 ORTHO05D007510 3.1e-16 90.5 201 30.3
HPP92_025825 Vanilla planifolia HOM05D006210 ORTHO05D007510 3.1e-16 90.5 363 25.3
EL10Ac7g17713 Beta vulgaris HOM05D006210 ORTHO05D007510 1.2e-15 88.6 193 30.6
Gorai.007G150600 Gossypium raimondii HOM05D006210 ORTHO05D007510 2.2e-14 84.3 189 34.4
Os03g0750100 Oryza sativa ssp. japonica HOM05D006210 ORTHO05D007510 2.2e-14 84.3 253 28.9
RcHm_v2.0_Chr6g0286031 Rosa chinensis HOM05D006210 ORTHO05D007510 1.9e-10 71.2 124 32.3
MD10G1174200 Malus domestica HOM05D006210 ORTHO05D007510 3.3e-10 70.5 119 31.9
CAN.G119.6 Capsicum annuum HOM05D006210 ORTHO05D007510 4.0e-08 63.5 120 34.2
Hma1.2p1_0559F.1_g178660 Hydrangea macrophylla HOM05D000705 ORTHO05D007510 8.9e-08 62.4 115 33.0
DCAR_000556 Daucus carota HOM05D006210 ORTHO05D007510 2.0e-07 61.2 119 29.4
Cfa024968 Carpinus fangiana HOM05D006210 ORTHO05D007510 4.4e-07 60.1 199 26.6
Prupe.8G213100 Prunus persica HOM05D006210 ORTHO05D007510 5.8e-07 59.7 242 24.4
PRCOL_00004000 Prasinoderma coloniale HOM05D002345 ORTHO05D002460 9.9e-07 58.9 180 31.1


User provided reference genes

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