Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre08.g361050 Chlamydomonas reinhardtii HOM05D006960 ORTHO05D008699 9.4e-154 547.0 306 100.0
SGA_v2.0_scaffold22G09984 Striga asiatica HOM05D006960 ORTHO05D008699 1.3e-38 164.5 155 57.4
PGR142G3971 Punica granatum HOM05D006960 ORTHO05D008699 6.5e-38 162.2 156 57.7
Lsat_1_v5_gn_8_13101 Lactuca sativa HOM05D006960 ORTHO05D008699 4.2e-37 159.5 157 54.8
Migut.B01880 Erythranthe guttata HOM05D006960 ORTHO05D008699 5.5e-37 159.1 203 49.8
GSVIVG01027159001 Vitis vinifera HOM05D006960 ORTHO05D008699 5.5e-37 159.1 191 49.7
MSTRG.17349 Avicennia marina HOM05D006960 ORTHO05D008699 7.2e-37 158.7 154 53.9
ECA236G0577 Erigeron canadensis HOM05D006960 ORTHO05D008699 2.1e-36 157.1 185 50.3
Thecc.01G341400 Theobroma cacao HOM05D006960 ORTHO05D008699 2.1e-36 157.1 205 47.8
Mapoly0053s0024 Marchantia polymorpha HOM05D006960 ORTHO05D008699 2.7e-36 156.8 154 57.1
CANSAT56G1276 Cannabis sativa HOM05D006960 ORTHO05D008699 3.6e-36 156.4 189 52.9
SalBow3G0783 Salvia bowleyana HOM05D006960 ORTHO05D008699 3.6e-36 156.4 185 49.2
Cpa.g.sc46.111 Carica papaya HOM05D006960 ORTHO05D008699 6.1e-36 155.6 157 55.4
Haze_15666 Corylus avellana HOM05D000451 ORTHO05D000351 1.8e-35 154.1 185 50.8
DCAR_021504 Daucus carota HOM05D006960 ORTHO05D008699 1.8e-35 154.1 185 49.7
BolC8t52877H Brassica oleracea HOM05D006960 ORTHO05D008699 2.3e-35 153.7 155 56.1
BraA09t42243Z Brassica rapa HOM05D006960 ORTHO05D008699 2.3e-35 153.7 155 56.1
Zm00001eb080710 Zea mays HOM05D006960 ORTHO05D008699 3.0e-35 153.3 154 55.2
Cc01_g12480 Coffea canephora HOM05D006960 ORTHO05D008699 3.9e-35 152.9 198 47.5
Gorai.007G109000 Gossypium raimondii HOM05D006960 ORTHO05D008699 3.9e-35 152.9 184 48.4
Oeu007886.1 Olea europaea HOM05D006960 ORTHO05D008699 3.9e-35 152.9 181 49.2
Oeu014974.1 Olea europaea HOM05D006960 ORTHO05D008699 3.9e-35 152.9 181 49.2
unitig_899.g14796 Utricularia gibba HOM05D006960 ORTHO05D008699 3.9e-35 152.9 154 52.6
HPP92_002925 Vanilla planifolia HOM05D006960 ORTHO05D008699 3.9e-35 152.9 152 55.9
Aqoxy6G00316 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 5.2e-35 152.5 154 53.2
FAN06G2002 Fragaria x ananassa HOM05D006960 ORTHO05D008699 5.2e-35 152.5 196 49.5
FAN10G4095 Fragaria x ananassa HOM05D006960 ORTHO05D008699 5.2e-35 152.5 191 50.3
Gohir.D11G102000 Gossypium hirsutum HOM05D006960 ORTHO05D008699 5.2e-35 152.5 184 48.4
MELO3C024139.2 Cucumis melo HOM05D006960 ORTHO05D008699 6.7e-35 152.1 154 53.9
SMO351G0341 Selaginella moellendorffii HOM05D006960 ORTHO05D008699 6.7e-35 152.1 167 55.7
ClCG09G009460 Citrullus lanatus HOM05D006960 ORTHO05D008699 8.8e-35 151.8 154 53.9
FAN06G3195 Fragaria x ananassa HOM05D006960 ORTHO05D008699 8.8e-35 151.8 191 50.3
PSO063G6262 Papaver somniferum HOM05D006960 ORTHO05D008699 8.8e-35 151.8 157 52.9
QL04p060559 Quercus lobata HOM05D006960 ORTHO05D008699 8.8e-35 151.8 154 53.9
FAN10G0984 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.1e-34 151.4 191 49.7
Manes.05G022300 Manihot esculenta HOM05D006960 ORTHO05D008699 1.1e-34 151.4 154 54.5
PGSC0003DMG400007011 Solanum tuberosum HOM05D006960 ORTHO05D008699 1.1e-34 151.4 204 48.0
EL10Ac1g00259 Beta vulgaris HOM05D006960 ORTHO05D008699 1.5e-34 151.0 190 50.5
Nn8g41032 Nelumbo nucifera HOM05D006960 ORTHO05D008699 1.5e-34 151.0 158 53.2
CSS0028122 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 2.0e-34 150.6 185 49.7
FvH4_7g16680 Fragaria vesca HOM05D006960 ORTHO05D008699 2.0e-34 150.6 191 50.3
A09p69060 Brassica napus HOM05D006960 ORTHO05D008699 2.6e-34 150.2 182 50.5
CSS0036785 Camellia sinensis var. sinensis HOM05D006960 ORTHO05D008699 2.6e-34 150.2 185 49.2
Lj5g0001318 Lotus japonicus HOM05D006960 ORTHO05D008699 2.6e-34 150.2 152 53.9
Phvul.007G014400 Phaseolus vulgaris HOM05D006960 ORTHO05D008699 2.6e-34 150.2 152 54.6
Rhsim04G0222700 Rhododendron simsii HOM05D006960 ORTHO05D008699 2.6e-34 150.2 185 48.6
Sed0021558 Sechium edule HOM05D006960 ORTHO05D008699 2.6e-34 150.2 185 49.7
Atru.chr5.678 Acer truncatum HOM05D006960 ORTHO05D008699 3.3e-34 149.8 178 51.7
CARHR001180 Cardamine hirsuta HOM05D006960 ORTHO05D008699 3.3e-34 149.8 193 49.2
HanXRQChr06g0170731 Helianthus annuus HOM05D006960 ORTHO05D008699 3.3e-34 149.8 185 47.6
Lalb_Chr06g0163941 Lupinus albus HOM05D006960 ORTHO05D008699 3.3e-34 149.8 152 54.6
Pp3c20_11370 Physcomitrium patens HOM05D006960 ORTHO05D008699 3.3e-34 149.8 259 43.2
MD07G1150800 Malus domestica HOM05D006960 ORTHO05D008699 4.4e-34 149.4 154 53.9
vmacro12673 Vaccinium macrocarpon HOM05D006960 ORTHO05D008699 4.4e-34 149.4 191 46.1
AL1G11170 Arabidopsis lyrata HOM05D006960 ORTHO05D008699 7.4e-34 148.7 185 49.7
C08p53630 Brassica napus HOM05D006960 ORTHO05D008699 7.4e-34 148.7 182 50.5
CAN.G1178.29 Capsicum annuum HOM05D006960 ORTHO05D008699 7.4e-34 148.7 204 48.0
Eucgr.E00049 Eucalyptus grandis HOM05D006960 ORTHO05D008699 7.4e-34 148.7 199 48.2
FAN01G3090 Fragaria x ananassa HOM05D006960 ORTHO05D008699 7.4e-34 148.7 191 49.2
MBI06_g44795_MAGBIO Magnolia biondii HOM05D006960 ORTHO05D008699 7.4e-34 148.7 185 49.2
TAR629G1073 Trochodendron aralioides HOM05D006960 ORTHO05D008699 7.4e-34 148.7 185 47.6
AT1G01290 Arabidopsis thaliana HOM05D006960 ORTHO05D008699 9.7e-34 148.3 183 50.3
RcHm_v2.0_Chr1g0359831 Rosa chinensis HOM05D006960 ORTHO05D008699 1.3e-33 147.9 191 48.7
Actinidia20248 Actinidia chinensis HOM05D000567 ORTHO05D001981 1.7e-33 147.5 185 48.1
TWI14G0597 Tripterygium wilfordii HOM05D006960 ORTHO05D008699 1.7e-33 147.5 268 43.3
Thhalv10008544m.g Eutrema salsugineum HOM05D006960 ORTHO05D008699 2.2e-33 147.1 205 48.8
Sc01g0002630 Simmondsia chinensis HOM05D000016 ORTHO05D007083 2.2e-33 147.1 185 50.3
ATR0602G026 Amborella trichopoda HOM05D006960 ORTHO05D008699 2.8e-33 146.7 181 48.6
arahy.Tifrunner.gnm1.ann1.CCVT8N Arachis hypogaea HOM05D006960 ORTHO05D008699 2.8e-33 146.7 149 55.7
Gohir.A11G097200 Gossypium hirsutum HOM05D006960 ORTHO05D008699 2.8e-33 146.7 180 47.8
MCO01G113 Micromonas commoda HOM05D006960 ORTHO05D008699 2.8e-33 146.7 158 52.5
PSO170G4910 Papaver somniferum HOM05D006960 ORTHO05D008699 2.8e-33 146.7 150 53.3
Os04g0460500 Oryza sativa ssp. japonica HOM05D006960 ORTHO05D008699 3.7e-33 146.4 213 45.1
Sp1g01000 Schrenkiella parvula HOM05D006960 ORTHO05D008699 3.7e-33 146.4 208 48.1
Solyc05g050570.3 Solanum lycopersicum HOM05D006960 ORTHO05D008699 3.7e-33 146.4 204 47.1
Ciclev10022060m.g Citrus clementina HOM05D006960 ORTHO05D008699 4.8e-33 146.0 180 50.0
Nitab4.5_0000258g0220 Nicotiana tabacum HOM05D006960 ORTHO05D008699 4.8e-33 146.0 191 48.7
Potri.014G099500 Populus trichocarpa HOM05D006960 ORTHO05D008699 4.8e-33 146.0 154 53.9
Aqoxy3G01066 Aquilegia oxysepala HOM05D006960 ORTHO05D008699 6.3e-33 145.6 154 51.3
Nitab4.5_0004506g0020 Nicotiana tabacum HOM05D006960 ORTHO05D008699 6.3e-33 145.6 191 48.7
Rhsim01G0172900 Rhododendron simsii HOM05D006960 ORTHO05D008699 6.3e-33 145.6 185 47.6
CAN.G1385.4 Capsicum annuum HOM05D006960 ORTHO05D008699 8.2e-33 145.2 204 45.1
Sopen05g029010 Solanum pennellii HOM05D006960 ORTHO05D008699 8.2e-33 145.2 204 46.6
Ca_11259_v3 Cicer arietinum L. HOM05D006960 ORTHO05D008699 1.1e-32 144.8 177 49.7
COL.COLO4_21448 Corchorus olitorius HOM05D006960 ORTHO05D008699 1.4e-32 144.4 207 46.9
Prupe.2G189500 Prunus persica HOM05D006960 ORTHO05D008699 1.4e-32 144.4 185 49.7
Carub.0001s0093 Capsella rubella HOM05D006960 ORTHO05D008699 1.8e-32 144.1 219 45.2
VMungo0720G2201 Vigna mungo HOM05D006960 ORTHO05D008699 1.8e-32 144.1 189 46.6
Glyma.20G102700 Glycine max HOM05D006960 ORTHO05D008699 4.1e-32 142.9 183 48.1
Medtr5g015740 Medicago truncatula HOM05D006960 ORTHO05D008699 4.1e-32 142.9 177 49.2
Peaxi162Scf00716g00022 Petunia axillaris HOM05D006960 ORTHO05D008699 4.1e-32 142.9 204 46.1
AUR62004502 Chenopodium quinoa HOM05D006960 ORTHO05D008699 7.0e-32 142.1 235 44.7
Psat6g234040 Pisum sativum HOM05D006960 ORTHO05D008699 9.1e-32 141.7 183 49.2
Sabra14G0073000 Salix brachista HOM05D006960 ORTHO05D008699 9.1e-32 141.7 154 51.9
TPR.G4075 Trifolium pratense HOM05D006960 ORTHO05D008699 9.1e-32 141.7 192 47.4
Aa31LG5G970 Aethionema arabicum HOM05D000451 ORTHO05D000351 1.6e-31 141.0 199 47.2
Medtr1g114590 Medicago truncatula HOM05D006960 ORTHO05D008699 2.6e-31 140.2 177 48.6
Dinv22299 Davidia involucrata HOM05D006960 ORTHO05D008699 5.9e-31 139.0 173 49.1
arahy.Tifrunner.gnm1.ann1.EW69V8 Arachis hypogaea HOM05D006471 ORTHO05D008157 7.7e-31 138.7 209 45.5
CBR_g23014 Chara braunii HOM05D006960 ORTHO05D008699 3.2e-29 133.3 154 50.6
Hund16718 Selenicereus undatus HOM05D006960 ORTHO05D008699 6.1e-28 129.0 173 48.0
VMungo0964G0001 Vigna mungo HOM05D006960 ORTHO05D008699 8.8e-27 125.2 156 48.7
Cfa022703 Carpinus fangiana HOM05D006960 ORTHO05D008699 5.0e-22 109.4 166 42.8
CDE10G0236 Ceratophyllum demersum HOM05D006960 ORTHO05D008699 2.6e-18 97.1 92 51.1
FAN03G0019 Fragaria x ananassa HOM05D006960 ORTHO05D008699 1.3e-17 94.7 92 56.5
CDE10G0916 Ceratophyllum demersum HOM05D000108 ORTHO05D001781 5.4e-16 89.4 112 45.5
HPP92_028636 Vanilla planifolia HOM05D006960 ORTHO05D008699 7.0e-16 89.0 170 40.0
AUR62014969 Chenopodium quinoa HOM05D006960 ORTHO05D008699 2.3e-14 84.0 203 37.4
CsaV3_7G025390 Cucumis sativus L. HOM05D006960 ORTHO05D008699 1.1e-13 81.6 86 52.3
Haze_27006 Corylus avellana HOM05D006202 ORTHO05D008699 1.4e-11 74.7 127 34.6
AUR62023452 Chenopodium quinoa HOM05D000040 ORTHO05D000759 3.7e-09 66.6 214 36.4
Cpa.g.sc96.27 Carica papaya HOM05D006960 ORTHO05D008699 5.4e-08 62.8 149 30.9
TAR636G2744 Trochodendron aralioides HOM05D006960 ORTHO05D008699 2.7e-07 60.5 101 38.6
PRCOL_00000953 Prasinoderma coloniale HOM05D006960 ORTHO05D008699 6.6e-06 55.8 210 31.9


User provided reference genes

Program Settings