Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 1.7e-199 699.1 349 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 1.6e-85 320.5 330 52.4
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 3.1e-84 316.2 314 53.5
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 9.9e-83 311.2 318 52.5
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 9.9e-83 311.2 320 50.6
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 3.8e-82 309.3 316 50.6
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 3.8e-82 309.3 316 50.6
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 8.4e-82 308.1 315 52.4
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 2.4e-81 306.6 315 51.1
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 2.4e-81 306.6 319 52.0
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 2.4e-81 306.6 316 50.9
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 4.2e-81 305.8 316 50.9
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 2.1e-80 303.5 318 50.3
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 6.0e-80 302.0 316 50.9
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 6.0e-80 302.0 333 49.5
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 7.8e-80 301.6 318 51.3
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 2.3e-79 300.1 315 50.2
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 3.0e-79 299.7 316 50.9
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 5.1e-79 298.9 316 50.9
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 6.6e-79 298.5 316 49.7
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 6.6e-79 298.5 316 50.3
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 8.7e-79 298.1 316 50.6
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 1.1e-78 297.7 317 50.2
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 1.1e-78 297.7 345 48.1
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 1.5e-78 297.4 318 49.1
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 1.5e-78 297.4 316 50.3
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 1.5e-78 297.4 317 50.2
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.9e-78 297.0 316 50.0
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 1.9e-78 297.0 325 49.2
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 1.9e-78 297.0 320 48.4
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 2.5e-78 296.6 316 50.3
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 2.5e-78 296.6 316 48.7
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 2.5e-78 296.6 317 50.5
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 3.3e-78 296.2 316 49.4
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 3.3e-78 296.2 315 49.8
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 3.3e-78 296.2 316 50.3
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 4.3e-78 295.8 293 52.2
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 4.3e-78 295.8 316 50.3
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 7.3e-78 295.0 317 48.6
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 7.3e-78 295.0 316 49.4
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 7.3e-78 295.0 317 50.5
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 9.6e-78 294.7 316 50.3
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 1.3e-77 294.3 315 49.2
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 1.6e-77 293.9 318 49.4
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 1.6e-77 293.9 317 49.5
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 1.6e-77 293.9 316 50.0
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 2.1e-77 293.5 315 49.2
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.8e-77 293.1 316 49.4
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 3.6e-77 292.7 315 50.5
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 3.6e-77 292.7 316 49.7
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 3.6e-77 292.7 316 50.3
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 4.8e-77 292.4 316 49.1
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 6.2e-77 292.0 316 49.4
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 8.1e-77 291.6 315 50.2
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 8.1e-77 291.6 316 48.7
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 1.4e-76 290.8 316 49.1
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 1.8e-76 290.4 315 48.9
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 2.4e-76 290.0 315 50.2
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 2.4e-76 290.0 316 48.4
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 3.1e-76 289.7 315 48.6
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 3.1e-76 289.7 315 48.6
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 3.1e-76 289.7 315 48.6
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 4.0e-76 289.3 316 48.7
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 4.0e-76 289.3 318 49.7
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 1.5e-75 287.3 316 48.4
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 2.0e-75 287.0 315 47.6
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 3.4e-75 286.2 298 50.7
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 3.4e-75 286.2 315 47.3
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 9.9e-75 284.6 315 47.0
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.2e-74 283.5 328 46.3
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 4.9e-74 282.3 289 51.6
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 2.3e-71 273.5 362 43.1
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 3.9e-71 272.7 274 50.4
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 1.1e-70 271.2 273 51.3
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 3.3e-70 269.6 316 47.8
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 4.3e-70 269.2 274 51.1
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 9.6e-70 268.1 273 49.1
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 8.1e-69 265.0 379 41.4
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 1.4e-68 264.2 288 49.3
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 1.8e-68 263.8 323 46.1
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 2.4e-68 263.5 273 50.2
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 4.0e-68 262.7 401 40.1
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.0e-68 262.7 273 48.7
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 5.3e-68 262.3 289 47.8
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 7.6e-67 258.5 276 51.8
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 1.7e-66 257.3 383 40.2
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 6.4e-66 255.4 243 54.7
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 3.5e-64 249.6 315 45.1
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 4.6e-64 249.2 250 51.6
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 2.9e-58 229.9 242 49.6
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 2.5e-54 216.9 320 40.0
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 1.1e-49 201.4 202 55.9
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 6.1e-48 195.7 267 43.1
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 5.0e-42 176.0 190 47.4
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 6.3e-37 159.1 150 54.7
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 5.2e-31 139.4 165 47.9
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 5.0e-26 122.9 132 46.2
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 4.1e-20 103.2 226 31.4
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 8.3e-13 79.0 102 40.2
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.9e-10 70.5 80 47.5
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 2.1e-08 64.3 78 48.7
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.8e-08 63.9 70 45.7


User provided reference genes

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