Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre07.g343850 Chlamydomonas reinhardtii HOM05D006261 ORTHO05D007979 4.3e-228 794.7 503 100.0
SEGI_22642 Sequoiadendron giganteum HOM05D006261 ORTHO05D007979 1.5e-36 158.3 505 31.7
MCO13G090 Micromonas commoda HOM05D006261 ORTHO05D007979 1.0e-35 155.6 518 29.7
Hund06186 Selenicereus undatus HOM05D006261 ORTHO05D007979 6.1e-33 146.4 497 29.8
Ca_12470_v3 Cicer arietinum L. HOM05D006261 ORTHO05D007979 3.7e-30 137.1 492 26.2
Glyma.07G178400 Glycine max HOM05D006261 ORTHO05D007979 4.8e-30 136.7 496 26.8
VMungo1215G1075 Vigna mungo HOM05D006261 ORTHO05D007979 1.1e-29 135.6 494 27.7
Phvul.003G012500 Phaseolus vulgaris HOM05D006261 ORTHO05D007979 1.4e-29 135.2 495 28.7
Potri.004G144100 Populus trichocarpa HOM05D006261 ORTHO05D007979 1.4e-29 135.2 495 26.5
TPR.G11138 Trifolium pratense HOM05D006261 ORTHO05D007979 4.1e-29 133.7 492 25.6
CsaV3_7G008780 Cucumis sativus L. HOM05D006261 ORTHO05D007979 5.3e-29 133.3 502 26.5
Solyc11g044870.2 Solanum lycopersicum HOM05D006261 ORTHO05D007979 5.3e-29 133.3 502 27.1
Thecc.02G096300 Theobroma cacao HOM05D006261 ORTHO05D007979 7.0e-29 132.9 502 26.3
PGSC0003DMG400022938 Solanum tuberosum HOM05D006261 ORTHO05D007979 9.1e-29 132.5 502 27.1
Aqoxy6G01433 Aquilegia oxysepala HOM05D006261 ORTHO05D007979 1.2e-28 132.1 493 25.8
THA.LOC104807349 Tarenaya hassleriana HOM05D006261 ORTHO05D007979 1.2e-28 132.1 495 25.5
Zm00001eb255680 Zea mays HOM05D006261 ORTHO05D007979 1.2e-28 132.1 500 27.0
Lsat_1_v5_gn_7_87821 Lactuca sativa HOM05D006261 ORTHO05D007979 1.5e-28 131.7 505 25.0
Mapoly0088s0010 Marchantia polymorpha HOM05D006261 ORTHO05D007979 1.5e-28 131.7 502 27.1
Lj2g0017302 Lotus japonicus HOM05D006261 ORTHO05D007979 2.0e-28 131.3 493 26.2
SGA_v2.0_scaffold58G20611 Striga asiatica HOM05D006261 ORTHO05D007979 2.0e-28 131.3 494 27.1
ATR0097G005 Amborella trichopoda HOM05D006261 ORTHO05D007979 2.6e-28 131.0 503 27.4
Prupe.8G116700 Prunus persica HOM05D006261 ORTHO05D007979 4.5e-28 130.2 495 26.9
HPP92_004260 Vanilla planifolia HOM05D006261 ORTHO05D007979 4.5e-28 130.2 501 31.7
C01p04840 Brassica napus HOM05D006261 ORTHO05D007979 5.9e-28 129.8 497 26.0
RcHm_v2.0_Chr6g0259011 Rosa chinensis HOM05D006261 ORTHO05D007979 5.9e-28 129.8 493 28.6
Sopen11g020360 Solanum pennellii HOM05D006261 ORTHO05D007979 1.0e-27 129.0 501 26.9
BolC1t00468H Brassica oleracea HOM05D006261 ORTHO05D007979 1.3e-27 128.6 495 25.7
Cc02_g18510 Coffea canephora HOM05D006261 ORTHO05D007979 1.3e-27 128.6 504 26.8
TAR381G0774 Trochodendron aralioides HOM05D006261 ORTHO05D007979 1.3e-27 128.6 496 26.4
AUR62011430 Chenopodium quinoa HOM05D006261 ORTHO05D007979 1.7e-27 128.3 501 25.1
Lalb_Chr10g0095461 Lupinus albus HOM05D006261 ORTHO05D007979 2.2e-27 127.9 500 26.2
Nn5g30173 Nelumbo nucifera HOM05D006261 ORTHO05D007979 2.2e-27 127.9 500 26.0
arahy.Tifrunner.gnm1.ann1.WU5QTE Arachis hypogaea HOM05D006261 ORTHO05D007979 2.9e-27 127.5 499 26.9
Carub.0007s0647 Capsella rubella HOM05D006261 ORTHO05D007979 2.9e-27 127.5 501 26.3
Os02g0761200 Oryza sativa ssp. japonica HOM05D006261 ORTHO05D007979 2.9e-27 127.5 498 29.9
Potri.009G106100 Populus trichocarpa HOM05D006261 ORTHO05D007979 2.9e-27 127.5 498 26.1
QL11p038259 Quercus lobata HOM05D006261 ORTHO05D007979 2.9e-27 127.5 501 26.7
unitig_21.g20756 Utricularia gibba HOM05D006261 ORTHO05D007979 2.9e-27 127.5 495 25.9
A01p04450 Brassica napus HOM05D006261 ORTHO05D007979 5.0e-27 126.7 497 25.8
CANSAT25G2015 Cannabis sativa HOM05D006261 ORTHO05D007979 5.0e-27 126.7 497 26.2
COL.COLO4_11716 Corchorus olitorius HOM05D006261 ORTHO05D007979 6.5e-27 126.3 501 26.1
Medtr1g034000 Medicago truncatula HOM05D006261 ORTHO05D007979 6.5e-27 126.3 492 25.6
SalBow6G7179 Salvia bowleyana HOM05D006261 ORTHO05D007979 8.5e-27 125.9 498 27.1
PSO541G6069 Papaver somniferum HOM05D006261 ORTHO05D007979 1.1e-26 125.6 494 27.3
Psat6g096640 Pisum sativum HOM05D006261 ORTHO05D007979 1.4e-26 125.2 492 26.0
Thhalv10025131m.g Eutrema salsugineum HOM05D006261 ORTHO05D007979 1.9e-26 124.8 501 25.5
HPP92_004238 Vanilla planifolia HOM05D006261 ORTHO05D007979 1.9e-26 124.8 501 31.1
Ah.01g020100 Amaranthus hybridus HOM05D006261 ORTHO05D007979 2.5e-26 124.4 503 29.6
BraA01t00432Z Brassica rapa HOM05D006261 ORTHO05D007979 2.5e-26 124.4 497 25.6
Ciclev10028211m.g Citrus clementina HOM05D006261 ORTHO05D007979 2.5e-26 124.4 499 24.4
EL10Ac9g21824 Beta vulgaris HOM05D006261 ORTHO05D007979 3.2e-26 124.0 500 25.4
FAN15G2665 Fragaria x ananassa HOM05D006261 ORTHO05D007979 3.2e-26 124.0 493 27.8
arahy.Tifrunner.gnm1.ann1.97F800 Arachis hypogaea HOM05D006261 ORTHO05D007979 5.5e-26 123.2 499 26.5
FAN20G2731 Fragaria x ananassa HOM05D006261 ORTHO05D007979 5.5e-26 123.2 493 27.6
FAN27G0123 Fragaria x ananassa HOM05D006261 ORTHO05D007979 7.2e-26 122.9 493 27.6
Gorai.002G007100 Gossypium raimondii HOM05D006261 ORTHO05D007979 9.4e-26 122.5 501 25.7
MBI02_g21208_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 9.4e-26 122.5 497 26.4
Cfa005432 Carpinus fangiana HOM05D006261 ORTHO05D007979 1.2e-25 122.1 501 25.5
Sabra04G0095700 Salix brachista HOM05D006261 ORTHO05D007979 1.2e-25 122.1 504 25.6
Manes.15G143000 Manihot esculenta HOM05D006261 ORTHO05D007979 1.6e-25 121.7 494 25.3
Sp7g31680 Schrenkiella parvula HOM05D006261 ORTHO05D007979 1.6e-25 121.7 501 26.1
Aa31LG2G16340 Aethionema arabicum HOM05D006261 ORTHO05D007979 2.1e-25 121.3 495 25.9
AT4G33945 Arabidopsis thaliana HOM05D006261 ORTHO05D007979 2.7e-25 120.9 501 25.0
HanXRQChr16g0508741 Helianthus annuus HOM05D006261 ORTHO05D007979 2.7e-25 120.9 505 25.9
AL7G17470 Arabidopsis lyrata HOM05D006261 ORTHO05D007979 3.6e-25 120.6 502 24.9
CiPaw.05G054700 Carya illinoinensis HOM05D006261 ORTHO05D007979 3.6e-25 120.6 527 26.0
TWI31G0850 Tripterygium wilfordii HOM05D006261 ORTHO05D007979 4.7e-25 120.2 501 25.5
AUR62016631 Chenopodium quinoa HOM05D006261 ORTHO05D007979 8.0e-25 119.4 514 24.5
MELO3C018434.2 Cucumis melo HOM05D006261 ORTHO05D007979 1.4e-24 118.6 500 25.6
Haze_01887 Corylus avellana HOM05D006261 ORTHO05D007979 2.3e-24 117.9 500 25.0
Atru.chr5.2784_Atru.chr5.2785 Acer truncatum HOM05D006261 ORTHO05D007979 3.0e-24 117.5 501 26.1
Atru.chr5.2799_Atru.chr5.2800 Acer truncatum HOM05D006261 ORTHO05D007979 3.0e-24 117.5 501 26.1
CSS0020679 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 5.2e-24 116.7 507 26.6
SMO116G0201 Selaginella moellendorffii HOM05D006261 ORTHO05D007979 6.7e-24 116.3 461 24.5
Migut.B00311 Erythranthe guttata HOM05D006261 ORTHO05D007979 2.0e-23 114.8 499 25.3
Cpa.g.sc62.43 Carica papaya HOM05D006261 ORTHO05D007979 7.4e-23 112.8 329 29.8
MD10G1089700 Malus domestica HOM05D006261 ORTHO05D007979 7.4e-23 112.8 495 25.7
Peaxi162Scf00684g00565 Petunia axillaris HOM05D006261 ORTHO05D007979 7.4e-23 112.8 364 29.4
CSS0049642 Camellia sinensis var. sinensis HOM05D006261 ORTHO05D007979 1.7e-22 111.7 512 26.2
Eucgr.I01173 Eucalyptus grandis HOM05D006261 ORTHO05D007979 2.2e-22 111.3 507 24.9
Sed0027300 Sechium edule HOM05D006261 ORTHO05D007979 2.2e-22 111.3 362 27.9
vmacro19482 Vaccinium macrocarpon HOM05D006261 ORTHO05D007979 2.8e-22 110.9 527 25.4
ECA236G1018 Erigeron canadensis HOM05D006261 ORTHO05D001911 1.1e-21 109.0 368 27.4
GSVIVG01031798001 Vitis vinifera HOM05D006261 ORTHO05D007979 4.1e-21 107.1 498 23.5
Hma1.2p1_3161F.1_g333480 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 3.5e-20 104.0 532 24.6
Sc08g0000100 Simmondsia chinensis HOM05D006261 ORTHO05D007979 4.5e-20 103.6 457 23.4
Gohir.A01G006000 Gossypium hirsutum HOM05D006261 ORTHO05D007979 2.2e-19 101.3 501 24.0
Actinidia17850 Actinidia chinensis HOM05D006261 ORTHO05D007979 3.8e-19 100.5 362 27.1
Rhsim05G0080700 Rhododendron simsii HOM05D006261 ORTHO05D007979 1.5e-18 98.6 520 24.0
Hma1.2p1_0584F.1_g183110 Hydrangea macrophylla HOM05D006261 ORTHO05D007979 3.2e-18 97.4 531 24.3
Nitab4.5_0000736g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 2.7e-17 94.4 505 24.8
Pp3c15_12310 Physcomitrium patens HOM05D006261 ORTHO05D007979 1.4e-16 92.0 506 24.1
PGR142G4090 Punica granatum HOM05D006261 ORTHO05D007979 2.3e-16 91.3 321 26.5
ClCG02G005750 Citrullus lanatus HOM05D006261 ORTHO05D007979 1.7e-14 85.1 504 23.2
CAN.G406.2 Capsicum annuum HOM05D006261 ORTHO05D007979 1.8e-13 81.6 359 26.5
PRCOL_00000949 Prasinoderma coloniale HOM05D006261 ORTHO05D007979 5.3e-13 80.1 355 28.5
Lj9C360T7 Lonicera japonica HOM05D006261 ORTHO05D007979 9.1e-13 79.3 526 22.1
Oeu007256.2 Olea europaea HOM05D006261 ORTHO05D007979 1.6e-12 78.6 452 21.7
DCAR_000243 Daucus carota HOM05D006261 ORTHO05D007979 2.7e-12 77.8 341 27.3
CARHR242070 Cardamine hirsuta HOM05D006261 ORTHO05D007979 5.9e-12 76.6 216 28.2
FAN24G3480 Fragaria x ananassa HOM05D006261 ORTHO05D007979 2.2e-11 74.7 460 24.8
Duzib052G0221 Durio zibethinus HOM05D006261 ORTHO05D007979 3.2e-10 70.9 497 23.1
BcaB03g11867 Brassica carinata HOM05D006261 ORTHO05D007979 1.2e-09 68.9 265 25.3
CDE10G1007 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 3.6e-09 67.4 515 21.6
MBI02_g32602_MAGBIO Magnolia biondii HOM05D006261 ORTHO05D007979 3.6e-09 67.4 107 38.3
Gohir.D01G006100 Gossypium hirsutum HOM05D006261 ORTHO05D007979 6.1e-09 66.6 501 21.6
Nitab4.5_0002141g0010 Nicotiana tabacum HOM05D006261 ORTHO05D007979 1.4e-08 65.5 320 24.4
FvH4_2g06790 Fragaria vesca HOM05D006261 ORTHO05D007979 2.3e-08 64.7 351 26.2
MSTRG.16765 Avicennia marina HOM05D006261 ORTHO05D007979 3.0e-08 64.3 346 25.1
Dinv23589 Davidia involucrata HOM05D006261 ORTHO05D007979 3.0e-08 64.3 359 23.7
SHI05382 Sapria himalayana HOM05D006261 ORTHO05D007979 1.5e-07 62.0 356 25.3
CAN.G406.3 Capsicum annuum HOM05D006261 ORTHO05D007979 2.2e-06 58.2 124 33.9
CDE10G0955 Ceratophyllum demersum HOM05D006261 ORTHO05D007979 4.8e-06 57.0 359 21.4


User provided reference genes

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