Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre07.g329800 Chlamydomonas reinhardtii HOM05D003821 ORTHO05D004449 1.0e-32 142.9 75 100.0
Migut.G00164 Erythranthe guttata HOM05D003821 ORTHO05D004449 3.1e-10 68.2 76 50.0
MSTRG.24794 Avicennia marina HOM05D003821 ORTHO05D004449 5.3e-10 67.4 61 54.1
Os06g0274000 Oryza sativa ssp. japonica HOM05D003821 ORTHO05D004449 7.0e-10 67.0 61 55.7
MSTRG.3917 Avicennia marina HOM05D003821 ORTHO05D004449 2.7e-09 65.1 60 53.3
Oeu027727.1 Olea europaea HOM05D003821 ORTHO05D004449 3.5e-09 64.7 61 50.8
CARHR290310 Cardamine hirsuta HOM05D003821 ORTHO05D004449 5.9e-09 63.9 61 52.5
AL7G39490 Arabidopsis lyrata HOM05D003821 ORTHO05D004449 1.3e-08 62.8 61 50.8
AT4G15802 Arabidopsis thaliana HOM05D003821 ORTHO05D004449 1.3e-08 62.8 61 50.8
Ca_10352_v3 Cicer arietinum L. HOM05D003821 ORTHO05D004449 1.7e-08 62.4 55 58.2
Oeu026313.1 Olea europaea HOM05D003821 ORTHO05D004449 1.7e-08 62.4 55 56.4
Hma1.2p1_0078F.1_g040550 Hydrangea macrophylla HOM05D003821 ORTHO05D004449 2.9e-08 61.6 60 50.0
Manes.15G012400 Manihot esculenta HOM05D003821 ORTHO05D004449 2.9e-08 61.6 55 56.4
Zm00001eb380410 Zea mays HOM05D003821 ORTHO05D004449 3.8e-08 61.2 63 49.2
Phvul.009G247900 Phaseolus vulgaris HOM05D003821 ORTHO05D004449 6.5e-08 60.5 61 49.2
Psat3g022560 Pisum sativum HOM05D003821 ORTHO05D004449 6.5e-08 60.5 55 54.5
CiPaw.08G097300 Carya illinoinensis HOM05D003821 ORTHO05D004449 8.5e-08 60.1 61 50.8
TWI09G0102 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 8.5e-08 60.1 61 50.8
Carub.0007s2585 Capsella rubella HOM05D003821 ORTHO05D004449 1.5e-07 59.3 61 47.5
CiPaw.07G106400 Carya illinoinensis HOM05D003821 ORTHO05D004449 1.9e-07 58.9 61 49.2
Rhsim02G0009100 Rhododendron simsii HOM05D003821 ORTHO05D004449 4.2e-07 57.8 75 44.0
TWI53G1984 Tripterygium wilfordii HOM05D003821 ORTHO05D004449 7.2e-07 57.0 54 51.9
CANSAT78G0465 Cannabis sativa HOM05D003821 ORTHO05D004449 4.7e-06 54.3 61 47.5
Mapoly0039s0070 Marchantia polymorpha HOM05D003821 ORTHO05D004449 4.7e-06 54.3 56 46.4
BraA08t33190Z Brassica rapa HOM05D003821 ORTHO05D004449 8.0e-06 53.5 78 41.0
Thecc.04G284600 Theobroma cacao HOM05D003821 ORTHO05D004449 8.0e-06 53.5 55 47.3
TPR.G33980 Trifolium pratense HOM05D003821 ORTHO05D004449 8.0e-06 53.5 82 40.2


User provided reference genes

Program Settings