Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre07.g325736 Chlamydomonas reinhardtii HOM05D006422 ORTHO05D007992 2.2e-222 775.8 531 100.0
Aa31LG9G9500 Aethionema arabicum HOM05D006422 ORTHO05D007992 1.5e-18 98.6 177 31.1
Atru.chr7.2615_Atru.chr7.2616 Acer truncatum HOM05D006422 ORTHO05D007992 4.5e-18 97.1 158 31.6
QL12p024696 Quercus lobata HOM05D006422 ORTHO05D007992 9.9e-18 95.9 213 27.7
CiPaw.07G214400 Carya illinoinensis HOM05D006422 ORTHO05D007992 1.3e-17 95.5 204 29.9
Cfa013253 Carpinus fangiana HOM05D006422 ORTHO05D007992 2.9e-17 94.4 204 28.9
TWI34G0909 Tripterygium wilfordii HOM05D006422 ORTHO05D007992 2.9e-17 94.4 194 28.4
HanXRQChr13g0412481 Helianthus annuus HOM05D006422 ORTHO05D007992 3.8e-17 94.0 209 29.7
Ca_12880_v3 Cicer arietinum L. HOM05D006422 ORTHO05D007992 4.9e-17 93.6 168 31.0
AL6G31470 Arabidopsis lyrata HOM05D006422 ORTHO05D007992 6.4e-17 93.2 177 29.4
PGR042G1463 Punica granatum HOM05D006422 ORTHO05D007992 6.4e-17 93.2 171 29.2
AT5G19940 Arabidopsis thaliana HOM05D006422 ORTHO05D007992 8.4e-17 92.8 177 29.4
COL.COLO4_18610 Corchorus olitorius HOM05D006422 ORTHO05D007992 8.4e-17 92.8 206 28.2
Medtr1g009980 Medicago truncatula HOM05D006422 ORTHO05D007992 8.4e-17 92.8 168 31.0
TPR.G11997 Trifolium pratense HOM05D006422 ORTHO05D007992 8.4e-17 92.8 160 30.0
Migut.A00443 Erythranthe guttata HOM05D006422 ORTHO05D007992 1.1e-16 92.4 243 28.8
MSTRG.11814 Avicennia marina HOM05D006422 ORTHO05D007992 1.4e-16 92.0 173 30.6
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 1.4e-16 92.0 243 26.3
ECA240G0283 Erigeron canadensis HOM05D000069 ORTHO05D000060 1.4e-16 92.0 189 30.2
Potri.006G276400 Populus trichocarpa HOM05D006422 ORTHO05D007992 1.4e-16 92.0 193 28.5
arahy.Tifrunner.gnm1.ann1.D9GJPD Arachis hypogaea HOM05D006422 ORTHO05D007992 1.9e-16 91.7 166 30.1
Carub.0006s1831 Capsella rubella HOM05D006422 ORTHO05D007992 1.9e-16 91.7 177 28.8
Thhalv10014537m.g Eutrema salsugineum HOM05D006422 ORTHO05D007992 1.9e-16 91.7 177 28.8
Psat6g032000 Pisum sativum HOM05D006422 ORTHO05D007992 3.2e-16 90.9 160 29.4
Sabra06G0214100 Salix brachista HOM05D006422 ORTHO05D007992 3.2e-16 90.9 193 28.5
arahy.Tifrunner.gnm1.ann1.43EIBT Arachis hypogaea HOM05D006422 ORTHO05D007992 4.2e-16 90.5 166 28.9
CDE04G2326 Ceratophyllum demersum HOM05D006422 ORTHO05D007992 4.2e-16 90.5 178 29.8
CARHR192910 Cardamine hirsuta HOM05D006422 ORTHO05D007992 5.5e-16 90.1 177 28.8
Haze_21696 Corylus avellana HOM05D006422 ORTHO05D007992 5.5e-16 90.1 178 29.8
Manes.16G136400 Manihot esculenta HOM05D006422 ORTHO05D007992 5.5e-16 90.1 193 28.5
Sp6g24440 Schrenkiella parvula HOM05D006422 ORTHO05D007992 5.5e-16 90.1 177 28.2
SGA_v2.0_scaffold27G11666 Striga asiatica HOM05D006422 ORTHO05D007992 7.1e-16 89.7 202 29.2
Duzib168G1765 Durio zibethinus HOM05D006422 ORTHO05D007992 9.3e-16 89.4 189 27.5
Eucgr.C02103 Eucalyptus grandis HOM05D006422 ORTHO05D007992 9.3e-16 89.4 187 30.5
Gohir.D06G108900 Gossypium hirsutum HOM05D006422 ORTHO05D007992 1.2e-15 89.0 161 29.2
Lalb_Chr14g0362181 Lupinus albus HOM05D006422 ORTHO05D007992 1.2e-15 89.0 214 28.0
Thecc.09G005200 Theobroma cacao HOM05D006422 ORTHO05D007992 1.2e-15 89.0 189 27.0
VMungo0647G2190 Vigna mungo HOM05D006422 ORTHO05D007992 1.2e-15 89.0 204 29.9
A03p09710 Brassica napus HOM05D006422 ORTHO05D007992 1.6e-15 88.6 177 28.8
BraA03t10287Z Brassica rapa HOM05D006422 ORTHO05D007992 1.6e-15 88.6 177 28.8
unitig_748.g7381 Utricularia gibba HOM05D006422 ORTHO05D007992 2.1e-15 88.2 173 27.7
BcaC04g19400 Brassica carinata HOM05D006422 ORTHO05D007992 2.7e-15 87.8 177 27.1
A10p19790 Brassica napus HOM05D006422 ORTHO05D007992 2.7e-15 87.8 177 27.1
C09p56110 Brassica napus HOM05D006422 ORTHO05D007992 2.7e-15 87.8 177 27.1
BolC9t58478H Brassica oleracea HOM05D006422 ORTHO05D007992 2.7e-15 87.8 177 27.1
BraA10t44055Z Brassica rapa HOM05D006422 ORTHO05D007992 2.7e-15 87.8 177 27.1
AUR62020627 Chenopodium quinoa HOM05D006422 ORTHO05D007992 2.7e-15 87.8 206 27.2
Gorai.010G123700 Gossypium raimondii HOM05D006422 ORTHO05D007992 2.7e-15 87.8 161 28.6
THA.LOC104811048 Tarenaya hassleriana HOM05D006422 ORTHO05D007992 2.7e-15 87.8 176 27.8
Ciclev10009324m.g Citrus clementina HOM05D006422 ORTHO05D007992 3.5e-15 87.4 203 27.1
Phvul.001G058000 Phaseolus vulgaris HOM05D006422 ORTHO05D007992 4.6e-15 87.0 183 29.0
BcaB01g04822 Brassica carinata HOM05D006422 ORTHO05D007992 6.0e-15 86.7 177 28.2
BcaB08g36552 Brassica carinata HOM05D006422 ORTHO05D007992 6.0e-15 86.7 177 26.6
C03p11290 Brassica napus HOM05D006422 ORTHO05D007992 6.0e-15 86.7 177 28.2
BolC3t13599H Brassica oleracea HOM05D006422 ORTHO05D007992 6.0e-15 86.7 177 28.2
Dinv10868 Davidia involucrata HOM05D006422 ORTHO05D007992 6.0e-15 86.7 164 29.3
Dinv26550 Davidia involucrata HOM05D006422 ORTHO05D007992 6.0e-15 86.7 164 29.3
Lj5g0012981 Lotus japonicus HOM05D006422 ORTHO05D007992 6.0e-15 86.7 160 28.1
Solyc08g006160.4 Solanum lycopersicum HOM05D006422 ORTHO05D007992 6.0e-15 86.7 250 25.2
PGSC0003DMG400009533 Solanum tuberosum HOM05D006422 ORTHO05D007992 7.9e-15 86.3 256 25.8
TAR383G0184 Trochodendron aralioides HOM05D006422 ORTHO05D007992 7.9e-15 86.3 203 28.1
Os04g0607000 Oryza sativa ssp. japonica HOM05D006422 ORTHO05D007992 1.0e-14 85.9 163 29.4
Rhsim07G0170200 Rhododendron simsii HOM05D006422 ORTHO05D007992 1.0e-14 85.9 225 24.9
Sopen08g002130 Solanum pennellii HOM05D006422 ORTHO05D007992 1.0e-14 85.9 250 25.6
PSO017G3510 Papaver somniferum HOM05D006422 ORTHO05D007992 1.3e-14 85.5 166 30.1
GSVIVG01035544001 Vitis vinifera HOM05D006422 ORTHO05D007992 1.3e-14 85.5 210 27.1
Lsat_1_v5_gn_5_61061 Lactuca sativa HOM05D006422 ORTHO05D007992 1.8e-14 85.1 206 28.2
SEGI_33970 Sequoiadendron giganteum HOM05D006422 ORTHO05D007992 1.8e-14 85.1 202 29.7
BcaB01g04848 Brassica carinata HOM05D006422 ORTHO05D007992 2.3e-14 84.7 177 27.1
HPP92_004705 Vanilla planifolia HOM05D006422 ORTHO05D007992 2.3e-14 84.7 205 28.8
AUR62038756 Chenopodium quinoa HOM05D006422 ORTHO05D007992 3.0e-14 84.3 182 27.5
MBI13_g31531_MAGBIO Magnolia biondii HOM05D006422 ORTHO05D007992 3.0e-14 84.3 168 31.0
PSO170G4757 Papaver somniferum HOM05D006422 ORTHO05D007992 3.0e-14 84.3 158 29.7
Prupe.1G462100 Prunus persica HOM05D006422 ORTHO05D007992 3.0e-14 84.3 193 26.4
Actinidia03579 Actinidia chinensis HOM05D006422 ORTHO05D007992 3.9e-14 84.0 248 24.2
MD15G1109900 Malus domestica HOM05D006422 ORTHO05D007992 3.9e-14 84.0 229 26.2
Pp3c13_4790 Physcomitrium patens HOM05D006422 ORTHO05D007992 3.9e-14 84.0 161 30.4
Mapoly0021s0119 Marchantia polymorpha HOM05D006422 ORTHO05D007992 5.1e-14 83.6 163 28.8
Aqoxy5G03915 Aquilegia oxysepala HOM05D006422 ORTHO05D007992 6.7e-14 83.2 164 29.9
FvH4_2g30680 Fragaria vesca HOM05D006422 ORTHO05D007992 6.7e-14 83.2 172 29.7
FAN24G2382 Fragaria x ananassa HOM05D006422 ORTHO05D007992 6.7e-14 83.2 172 29.7
Gohir.A06G106700 Gossypium hirsutum HOM05D006422 ORTHO05D007992 6.7e-14 83.2 196 27.0
Zm00001eb071430 Zea mays HOM05D006422 ORTHO05D007992 1.5e-13 82.0 163 30.7
Cc04_g09430 Coffea canephora HOM05D006422 ORTHO05D007992 1.9e-13 81.6 222 24.8
MELO3C011201.2 Cucumis melo HOM05D006422 ORTHO05D007992 1.9e-13 81.6 120 34.2
vmacro05107 Vaccinium macrocarpon HOM05D006422 ORTHO05D007992 1.9e-13 81.6 189 26.5
CAN.G1364.3 Capsicum annuum HOM05D006422 ORTHO05D007992 2.5e-13 81.3 209 25.8
FAN27G3442 Fragaria x ananassa HOM05D006422 ORTHO05D007992 3.3e-13 80.9 171 29.8
Nn1g01726 Nelumbo nucifera HOM05D006422 ORTHO05D007992 4.3e-13 80.5 175 28.0
RcHm_v2.0_Chr6g0312201 Rosa chinensis HOM05D006422 ORTHO05D007992 5.6e-13 80.1 158 27.8
Glyma.17G201600 Glycine max HOM05D006422 ORTHO05D007992 9.6e-13 79.3 222 25.2
ATR0626G032 Amborella trichopoda HOM05D006422 ORTHO05D007992 2.1e-12 78.2 170 25.9
Sc09g0007930 Simmondsia chinensis HOM05D006422 ORTHO05D007992 2.1e-12 78.2 171 25.1
Hma1.2p1_0534F.1_g173720 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 2.8e-12 77.8 158 27.2
CSS0034711 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 8.2e-12 76.3 128 29.7
EL10Ac2g03719 Beta vulgaris HOM05D006422 ORTHO05D007992 1.1e-11 75.9 119 33.6
Oeu018400.2 Olea europaea HOM05D006422 ORTHO05D007992 1.1e-11 75.9 147 28.6
Peaxi162Scf00045g01530 Petunia axillaris HOM05D006422 ORTHO05D007992 1.4e-11 75.5 230 25.7
FAN15G3645 Fragaria x ananassa HOM05D006422 ORTHO05D007992 2.4e-11 74.7 114 33.3
CANSAT25G0758 Cannabis sativa HOM05D006422 ORTHO05D007992 4.0e-11 73.9 206 25.2
FAN20G1184 Fragaria x ananassa HOM05D006422 ORTHO05D007992 4.0e-11 73.9 104 34.6
CSS0017479 Camellia sinensis var. sinensis HOM05D006422 ORTHO05D007992 6.9e-11 73.2 128 29.7
DCAR_003025 Daucus carota HOM05D006422 ORTHO05D007992 9.0e-11 72.8 190 25.3
Hma1.2p1_0534F.1_g173730 Hydrangea macrophylla HOM05D006422 ORTHO05D007992 3.4e-10 70.9 100 32.0
CBR_g3792 Chara braunii HOM05D006422 ORTHO05D007992 4.5e-10 70.5 118 33.9
Nitab4.5_0000025g0080 Nicotiana tabacum HOM05D006422 ORTHO05D007992 1.7e-09 68.6 250 23.6
Nitab4.5_0003259g0070 Nicotiana tabacum HOM05D006422 ORTHO05D007992 2.9e-09 67.8 235 23.4


User provided reference genes

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