Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 4.0e-207 724.5 371 100.0
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 1.3e-35 154.8 285 37.2
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 2.8e-35 153.7 306 33.0
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 3.7e-35 153.3 304 34.5
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 4.8e-35 152.9 285 35.4
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 1.1e-34 151.8 304 35.5
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.4e-34 151.4 306 32.7
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 1.4e-34 151.4 309 35.6
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 5.3e-34 149.4 304 33.9
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 6.9e-34 149.1 286 33.2
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 1.2e-33 148.3 289 35.3
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.5e-33 147.9 311 32.5
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 1.5e-33 147.9 307 33.9
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 1.5e-33 147.9 306 33.3
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 2.6e-33 147.1 284 36.3
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 2.6e-33 147.1 291 32.6
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 2.6e-33 147.1 303 33.7
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 3.4e-33 146.7 288 35.1
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 3.4e-33 146.7 285 35.4
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 4.5e-33 146.4 289 34.3
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 4.5e-33 146.4 306 34.3
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 5.9e-33 146.0 312 33.7
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 7.6e-33 145.6 325 32.9
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 7.6e-33 145.6 304 32.9
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 1.0e-32 145.2 354 31.6
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 1.0e-32 145.2 297 35.4
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 1.0e-32 145.2 285 35.1
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 1.3e-32 144.8 313 33.5
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 1.7e-32 144.4 298 33.9
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 2.9e-32 143.7 286 33.6
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 3.8e-32 143.3 293 32.4
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 5.0e-32 142.9 287 33.4
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 5.0e-32 142.9 310 33.2
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 8.5e-32 142.1 305 33.1
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 1.1e-31 141.7 311 31.5
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 1.4e-31 141.4 308 32.8
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 1.4e-31 141.4 283 35.0
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 1.4e-31 141.4 335 33.1
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 1.9e-31 141.0 289 32.9
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 1.9e-31 141.0 285 33.0
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 1.9e-31 141.0 310 32.3
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 1.9e-31 141.0 294 34.4
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 1.9e-31 141.0 291 35.7
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 2.5e-31 140.6 310 32.9
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 3.2e-31 140.2 311 31.2
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 4.2e-31 139.8 306 33.3
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 5.5e-31 139.4 300 33.3
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 5.5e-31 139.4 307 33.9
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 5.5e-31 139.4 284 34.5
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 5.5e-31 139.4 291 34.7
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 9.3e-31 138.7 314 35.0
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 9.3e-31 138.7 313 32.6
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 9.3e-31 138.7 295 34.2
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 1.2e-30 138.3 287 32.1
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.2e-30 138.3 282 34.0
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 1.6e-30 137.9 310 31.9
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 1.6e-30 137.9 282 33.7
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 1.6e-30 137.9 285 33.0
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 2.1e-30 137.5 287 32.8
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 2.1e-30 137.5 291 34.0
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 2.1e-30 137.5 285 32.3
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 2.1e-30 137.5 306 33.7
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 4.6e-30 136.3 354 30.5
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 6.1e-30 136.0 191 38.7
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 1.0e-29 135.2 290 33.4
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 1.0e-29 135.2 308 32.5
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 1.0e-29 135.2 306 32.0
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 3.0e-29 133.7 297 32.0
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 3.9e-29 133.3 280 33.9
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 3.9e-29 133.3 310 31.9
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 3.9e-29 133.3 304 31.6
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 5.1e-29 132.9 286 33.2
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 5.1e-29 132.9 300 33.3
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 5.1e-29 132.9 284 33.1
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 8.7e-29 132.1 286 32.2
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 1.1e-28 131.7 281 31.0
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 1.5e-28 131.3 294 33.0
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 2.5e-28 130.6 282 32.6
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 3.3e-28 130.2 279 31.5
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 3.3e-28 130.2 277 32.9
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 7.4e-28 129.0 279 30.8
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 7.4e-28 129.0 282 31.9
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 1.3e-27 128.3 276 31.2
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 1.6e-27 127.9 281 31.7
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 2.2e-27 127.5 282 32.3
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 3.7e-27 126.7 284 31.7
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 4.8e-27 126.3 269 33.1
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 6.3e-27 125.9 298 31.9
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 1.8e-26 124.4 322 30.1
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 1.8e-26 124.4 286 33.6
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 9.1e-26 122.1 282 29.8
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 9.1e-26 122.1 170 38.8
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 1.2e-25 121.7 338 29.9
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 1.5e-25 121.3 308 29.9
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 2.6e-25 120.6 222 34.2
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 2.6e-25 120.6 280 32.1
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 2.9e-24 117.1 355 29.0
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 3.8e-24 116.7 347 28.0
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 5.0e-24 116.3 291 29.9
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 1.4e-23 114.8 160 40.6
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.2e-22 111.7 170 38.2
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 4.6e-22 109.8 162 40.1
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 6.1e-22 109.4 348 27.3
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 7.9e-22 109.0 191 34.0
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 3.0e-21 107.1 171 36.3
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 1.1e-20 105.1 169 36.7
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 2.0e-20 104.4 175 34.9
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 5.7e-20 102.8 159 38.4
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 5.7e-20 102.8 136 41.2
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 1.5e-17 94.7 82 53.7
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 2.0e-17 94.4 266 27.4
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 1.3e-16 91.7 280 30.0
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 2.2e-16 90.9 280 29.6
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 9.4e-15 85.5 85 45.9
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 4.7e-14 83.2 249 28.9
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 1.5e-12 78.2 251 29.9
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 7.4e-12 75.9 99 40.4
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 1.0e-08 65.5 184 27.7
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 8.5e-08 62.4 58 48.3
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 9.4e-07 58.9 184 26.1
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 1.2e-06 58.5 167 26.9
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 2.7e-06 57.4 246 25.6


User provided reference genes

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