Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g305500 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 7.9e-118 427.2 224 100.0
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 7.2e-10 68.6 144 31.9
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 1.2e-09 67.8 146 30.8
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 1.6e-09 67.4 168 31.5
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 1.4e-08 64.3 119 33.6
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 3.0e-08 63.2 147 29.9
Cre10.g448500 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 6.7e-08 62.0 164 32.9
SMO147G0229 Selaginella moellendorffii HOM05D005658 ORTHO05D006989 1.5e-07 60.8 133 32.3
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 2.0e-07 60.5 145 26.9
Mapoly0052s0007 Marchantia polymorpha HOM05D005658 ORTHO05D006989 2.0e-07 60.5 130 33.8
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 4.4e-07 59.3 141 33.3
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 4.4e-07 59.3 147 26.5
Cre17.g706800 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 7.4e-07 58.5 88 36.4
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 1.3e-06 57.8 149 26.8
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 1.3e-06 57.8 144 28.5
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 1.3e-06 57.8 147 25.9
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 1.3e-06 57.8 147 27.9
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 1.3e-06 57.8 147 27.9
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 1.3e-06 57.8 144 26.4
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 1.7e-06 57.4 147 28.6
Phvul.003G004400 Phaseolus vulgaris HOM05D006499 ORTHO05D007874 2.2e-06 57.0 148 27.7
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 2.2e-06 57.0 147 27.9
Cfa008745 Carpinus fangiana HOM05D006499 ORTHO05D007874 2.8e-06 56.6 148 26.4
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 2.8e-06 56.6 148 28.4
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 2.8e-06 56.6 148 25.0
Sed0000814 Sechium edule HOM05D005658 ORTHO05D006989 2.8e-06 56.6 82 41.5
AT5G23220 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 4.8e-06 55.8 129 29.5
Glyma.09G283200 Glycine max HOM05D006499 ORTHO05D007874 4.8e-06 55.8 126 29.4
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 4.8e-06 55.8 149 25.5
Pp3s30_680 Physcomitrium patens HOM05D006499 ORTHO05D007874 6.3e-06 55.5 89 31.5
ATR0736G109 Amborella trichopoda HOM05D005658 ORTHO05D006989 8.2e-06 55.1 141 29.8
CBR_g48432 Chara braunii HOM05D005658 ORTHO05D006989 8.2e-06 55.1 90 38.9
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 8.2e-06 55.1 147 25.2


User provided reference genes

Program Settings