Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g304850 Chlamydomonas reinhardtii HOM05D003389 ORTHO05D003917 3.6e-261 905.6 1055 100.0
SEGI_34401 Sequoiadendron giganteum HOM05D003389 ORTHO05D003917 4.0e-34 151.4 159 51.6
unitig_699.g19759 Utricularia gibba HOM05D003389 ORTHO05D003917 5.7e-33 147.5 180 43.9
CDE04G0877 Ceratophyllum demersum HOM05D003389 ORTHO05D003917 8.3e-32 143.7 164 48.2
Ah.12g057800 Amaranthus hybridus HOM05D003389 ORTHO05D003917 1.1e-31 143.3 161 47.2
THA.LOC104814202 Tarenaya hassleriana HOM05D003389 ORTHO05D003917 1.4e-31 142.9 162 46.3
CAN.G981.56 Capsicum annuum HOM05D003389 ORTHO05D003917 1.8e-31 142.5 164 45.7
Lalb_Chr09g0324691 Lupinus albus HOM05D003389 ORTHO05D003917 2.4e-31 142.1 161 46.0
THA.LOC104806361 Tarenaya hassleriana HOM05D003389 ORTHO05D003917 2.4e-31 142.1 162 46.9
SMO367G0360 Selaginella moellendorffii HOM05D003389 ORTHO05D003917 3.1e-31 141.7 176 46.6
Sc07g0009480 Simmondsia chinensis HOM05D003389 ORTHO05D003917 3.1e-31 141.7 160 47.5
SGA_v2.0_scaffold144G35980 Striga asiatica HOM05D003389 ORTHO05D003917 3.1e-31 141.7 163 46.0
GSVIVG01019881001 Vitis vinifera HOM05D003389 ORTHO05D003917 3.1e-31 141.7 181 44.2
CANSAT21G1884 Cannabis sativa HOM05D003389 ORTHO05D003917 4.1e-31 141.4 183 43.2
Dinv37703 Davidia involucrata HOM05D003389 ORTHO05D003917 4.1e-31 141.4 166 45.2
Sp6g05610 Schrenkiella parvula HOM05D003389 ORTHO05D003917 4.1e-31 141.4 162 46.3
Sed0009929 Sechium edule HOM05D003389 ORTHO05D003917 4.1e-31 141.4 160 46.9
FAN18G0817 Fragaria x ananassa HOM05D003389 ORTHO05D003917 5.4e-31 141.0 160 45.6
RcHm_v2.0_Chr7g0199771 Rosa chinensis HOM05D003389 ORTHO05D003917 5.4e-31 141.0 155 47.7
ATR0661G488 Amborella trichopoda HOM05D003389 ORTHO05D003917 7.0e-31 140.6 186 41.4
BcaB01g01683 Brassica carinata HOM05D003389 ORTHO05D003917 7.0e-31 140.6 162 45.7
Migut.E01161 Erythranthe guttata HOM05D003389 ORTHO05D003917 7.0e-31 140.6 164 46.3
TWI15G1193 Tripterygium wilfordii HOM05D003389 ORTHO05D003917 7.0e-31 140.6 155 47.7
Lj2g0004762 Lotus japonicus HOM05D003389 ORTHO05D003917 9.1e-31 140.2 173 44.5
SalBow6G3358 Salvia bowleyana HOM05D003389 ORTHO05D003917 9.1e-31 140.2 181 43.1
CARHR254440 Cardamine hirsuta HOM05D003389 ORTHO05D003917 1.2e-30 139.8 159 46.5
Thhalv10028490m.g Eutrema salsugineum HOM05D003389 ORTHO05D003917 1.2e-30 139.8 162 45.7
Glyma.11G027200 Glycine max HOM05D003389 ORTHO05D003917 1.2e-30 139.8 161 45.3
Nn6g34315 Nelumbo nucifera HOM05D003389 ORTHO05D003917 1.2e-30 139.8 191 41.9
Hund11535 Selenicereus undatus HOM05D003389 ORTHO05D003917 1.2e-30 139.8 160 45.0
Aa31LG9G10590 Aethionema arabicum HOM05D003389 ORTHO05D003917 1.6e-30 139.4 159 45.9
Gohir.A09G193500 Gossypium hirsutum HOM05D003389 ORTHO05D003917 1.6e-30 139.4 159 44.7
Gorai.006G210500 Gossypium raimondii HOM05D003389 ORTHO05D003917 1.6e-30 139.4 159 44.7
HanXRQChr11g0336621 Helianthus annuus HOM05D003389 ORTHO05D003917 1.6e-30 139.4 178 43.3
Nitab4.5_0008362g0010 Nicotiana tabacum HOM05D003389 ORTHO05D003917 1.6e-30 139.4 164 43.9
AT4G11860 Arabidopsis thaliana HOM05D003389 ORTHO05D003917 2.0e-30 139.0 165 46.1
EL10Ac5g12710 Beta vulgaris HOM05D003389 ORTHO05D003917 2.0e-30 139.0 161 47.2
CSS0021110 Camellia sinensis var. sinensis HOM05D003389 ORTHO05D003917 2.0e-30 139.0 165 46.1
Carub.0006s3095 Capsella rubella HOM05D003389 ORTHO05D003917 2.0e-30 139.0 169 44.4
Ciclev10019075m.g Citrus clementina HOM05D003389 ORTHO05D003917 2.0e-30 139.0 168 44.0
Glyma.01G214700 Glycine max HOM05D003389 ORTHO05D003917 2.0e-30 139.0 169 43.8
Gohir.D09G187700 Gossypium hirsutum HOM05D003389 ORTHO05D003917 2.0e-30 139.0 159 44.7
Pp3c17_3230 Physcomitrium patens HOM05D003389 ORTHO05D003917 2.0e-30 139.0 163 46.0
SGA_v2.0_scaffold286G47125 Striga asiatica HOM05D003389 ORTHO05D003917 2.0e-30 139.0 191 41.9
VMungo1215G1985 Vigna mungo HOM05D003389 ORTHO05D003917 2.0e-30 139.0 161 45.3
arahy.Tifrunner.gnm1.ann1.18T4MA Arachis hypogaea HOM05D003389 ORTHO05D003917 2.7e-30 138.7 179 44.7
arahy.Tifrunner.gnm1.ann1.HGX6IC Arachis hypogaea HOM05D003389 ORTHO05D003917 2.7e-30 138.7 179 44.7
FvH4_5g01250 Fragaria vesca HOM05D003389 ORTHO05D003917 2.7e-30 138.7 160 45.6
FAN04G3242 Fragaria x ananassa HOM05D003389 ORTHO05D003917 2.7e-30 138.7 160 45.6
FAN08G2451 Fragaria x ananassa HOM05D003389 ORTHO05D003917 2.7e-30 138.7 160 45.6
FAN13G0159 Fragaria x ananassa HOM05D003389 ORTHO05D003917 2.7e-30 138.7 160 45.6
Gohir.A11G021100 Gossypium hirsutum HOM05D003389 ORTHO05D003917 2.7e-30 138.7 160 46.2
Manes.02G030300 Manihot esculenta HOM05D003389 ORTHO05D003917 2.7e-30 138.7 160 46.2
Prupe.5G088000 Prunus persica HOM05D003389 ORTHO05D003917 2.7e-30 138.7 160 45.6
TAR636G1874 Trochodendron aralioides HOM05D003389 ORTHO05D003917 2.7e-30 138.7 175 44.6
MBI11_g05095_MAGBIO Magnolia biondii HOM05D003389 ORTHO05D003917 3.5e-30 138.3 175 44.6
CsaV3_5G003350 Cucumis sativus L. HOM05D003389 ORTHO05D003917 4.5e-30 137.9 160 46.2
Phvul.002G153200 Phaseolus vulgaris HOM05D003389 ORTHO05D003917 4.5e-30 137.9 169 43.2
QL12p016621 Quercus lobata HOM05D003389 ORTHO05D003917 4.5e-30 137.9 179 42.5
Sed0023838 Sechium edule HOM05D003389 ORTHO05D003917 4.5e-30 137.9 160 45.6
Hund14708 Selenicereus undatus HOM05D003389 ORTHO05D003917 4.5e-30 137.9 160 45.6
Sopen08g028470 Solanum pennellii HOM05D003389 ORTHO05D003917 4.5e-30 137.9 179 43.0
TWI81G0612 Tripterygium wilfordii HOM05D003389 ORTHO05D003917 4.5e-30 137.9 155 46.5
Atru.chr9.1507 Acer truncatum HOM05D003389 ORTHO05D003917 5.9e-30 137.5 166 44.0
A09p27250 Brassica napus HOM05D003389 ORTHO05D003917 5.9e-30 137.5 159 45.3
Peaxi162Scf00620g00617 Petunia axillaris HOM05D003389 ORTHO05D003917 5.9e-30 137.5 163 44.8
Ca_06667_v3 Cicer arietinum L. HOM05D003389 ORTHO05D003917 7.7e-30 137.1 161 46.0
Medtr5g011090 Medicago truncatula HOM05D003389 ORTHO05D003917 7.7e-30 137.1 176 44.3
Gorai.007G022100 Gossypium raimondii HOM05D003389 ORTHO05D003917 1.0e-29 136.7 160 45.6
PSO478G1498 Papaver somniferum HOM05D003389 ORTHO05D003917 1.0e-29 136.7 176 45.5
SHI13491 Sapria himalayana HOM05D003389 ORTHO05D003917 1.0e-29 136.7 184 40.8
PGSC0003DMG400022735 Solanum tuberosum HOM05D003389 ORTHO05D003917 1.0e-29 136.7 178 42.1
Thecc.03G268500 Theobroma cacao HOM05D003389 ORTHO05D003917 1.0e-29 136.7 160 46.2
BcaC04g21168 Brassica carinata HOM05D003389 ORTHO05D003917 1.3e-29 136.3 159 44.7
C09p34580 Brassica napus HOM05D003389 ORTHO05D003917 1.3e-29 136.3 159 44.7
BolC9t56305H Brassica oleracea HOM05D003389 ORTHO05D003917 1.3e-29 136.3 159 44.7
BraA09t38293Z Brassica rapa HOM05D003389 ORTHO05D003917 1.3e-29 136.3 159 44.7
Cc08_g13790 Coffea canephora HOM05D003389 ORTHO05D003917 1.3e-29 136.3 163 44.2
Gohir.A08G177400 Gossypium hirsutum HOM05D003389 ORTHO05D003917 1.3e-29 136.3 160 45.6
Nn1g01292 Nelumbo nucifera HOM05D003389 ORTHO05D003917 1.3e-29 136.3 191 42.4
PSO782G1906 Papaver somniferum HOM05D003389 ORTHO05D003917 1.3e-29 136.3 160 46.2
ECA240G1577 Erigeron canadensis HOM05D003389 ORTHO05D003917 1.7e-29 136.0 169 42.6
CiPaw.11G142600 Carya illinoinensis HOM05D003389 ORTHO05D003917 2.2e-29 135.6 167 45.5
Oeu001902.1 Olea europaea HOM05D003389 ORTHO05D003917 2.2e-29 135.6 164 43.9
Psat2g181120 Pisum sativum HOM05D003389 ORTHO05D003917 2.2e-29 135.6 177 42.9
Gohir.D08G195800 Gossypium hirsutum HOM05D003389 ORTHO05D003917 2.9e-29 135.2 160 45.0
Gorai.004G206500 Gossypium raimondii HOM05D003389 ORTHO05D003917 2.9e-29 135.2 160 45.0
HPP92_022000 Vanilla planifolia HOM05D003389 ORTHO05D003917 2.9e-29 135.2 168 43.5
Aqoxy5G03952 Aquilegia oxysepala HOM05D003389 ORTHO05D003917 3.8e-29 134.8 160 46.2
Pp3c12_2860 Physcomitrium patens HOM05D003389 ORTHO05D003917 3.8e-29 134.8 163 45.4
Zm00001eb227790 Zea mays HOM05D003389 ORTHO05D003917 3.8e-29 134.8 162 43.8
CiPaw.12G100200 Carya illinoinensis HOM05D003389 ORTHO05D003917 5.0e-29 134.4 195 41.0
AUR62017315 Chenopodium quinoa HOM05D003389 ORTHO05D003917 5.0e-29 134.4 156 46.2
Duzib205G0992 Durio zibethinus HOM05D003389 ORTHO05D003917 5.0e-29 134.4 160 45.0
Cfa012079 Carpinus fangiana HOM05D003389 ORTHO05D003917 6.5e-29 134.0 175 42.9
PGR031G2775 Punica granatum HOM05D003389 ORTHO05D003917 6.5e-29 134.0 155 45.8
ECA233G2019 Erigeron canadensis HOM05D003389 ORTHO05D003917 8.5e-29 133.7 177 42.9
Potri.001G112300 Populus trichocarpa HOM05D003389 ORTHO05D003917 1.1e-28 133.3 160 43.8
Dinv39033 Davidia involucrata HOM05D003389 ORTHO05D003917 1.5e-28 132.9 177 42.9
Lsat_1_v5_gn_6_79100 Lactuca sativa HOM05D003389 ORTHO05D003917 1.5e-28 132.9 169 43.2
Manes.01G069600 Manihot esculenta HOM05D003389 ORTHO05D003917 1.5e-28 132.9 160 44.4
Sabra03G0084000 Salix brachista HOM05D003389 ORTHO05D003917 1.5e-28 132.9 160 43.1
Actinidia05234 Actinidia chinensis HOM05D003389 ORTHO05D003917 1.9e-28 132.5 159 44.7
Duzib068G0926 Durio zibethinus HOM05D003389 ORTHO05D003917 1.9e-28 132.5 160 43.8
Duzib084G0706 Durio zibethinus HOM05D003389 ORTHO05D003917 2.5e-28 132.1 160 43.1
Potri.003G119800 Populus trichocarpa HOM05D003389 ORTHO05D003917 2.5e-28 132.1 160 43.1
Lsat_1_v5_gn_6_10400 Lactuca sativa HOM05D003389 ORTHO05D003917 4.2e-28 131.3 175 42.3
Os06g0712400 Oryza sativa ssp. japonica HOM05D003389 ORTHO05D003917 9.5e-28 130.2 157 43.3
AUR62010575 Chenopodium quinoa HOM05D003389 ORTHO05D003917 1.2e-27 129.8 156 46.2
Mapoly0108s0010 Marchantia polymorpha HOM05D003389 ORTHO05D003917 1.6e-27 129.4 178 42.7
Eucgr.D01936 Eucalyptus grandis HOM05D003389 ORTHO05D003917 2.1e-27 129.0 159 44.7
Sabra01G0085800 Salix brachista HOM05D003389 ORTHO05D003917 6.1e-27 127.5 168 42.3
CSS0044016 Camellia sinensis var. sinensis HOM05D003389 ORTHO05D003917 8.0e-27 127.1 165 42.4
Gohir.D11G020800 Gossypium hirsutum HOM05D003389 ORTHO05D003917 1.8e-26 125.9 166 42.2
MCO06G239 Micromonas commoda HOM05D003389 ORTHO05D003917 1.8e-26 125.9 189 37.0
MD06G1071400 Malus domestica HOM05D003389 ORTHO05D003917 2.3e-26 125.6 146 47.3
AagrBONN_evm.TU.Sc2ySwM_228.3893 Anthoceros agrestis HOM05D003389 ORTHO05D003917 3.0e-26 125.2 169 44.4
SalBow1G6995 Salvia bowleyana HOM05D003262 ORTHO05D003917 3.0e-26 125.2 159 44.0
MD04G1069900 Malus domestica HOM05D003389 ORTHO05D003917 6.8e-26 124.0 138 48.6
Cpa.g.sc29.33 Carica papaya HOM05D003389 ORTHO05D003917 9.8e-25 120.2 145 46.2
PRCOL_00006333 Prasinoderma coloniale HOM05D003389 ORTHO05D003917 2.8e-24 118.6 198 38.9
RcHm_v2.0_Chr1g0379891 Rosa chinensis HOM05D003389 ORTHO05D003917 2.8e-24 118.6 188 37.8
BcaC09g51049 Brassica carinata HOM05D003389 ORTHO05D003917 4.9e-24 117.9 161 38.5
Thhalv10027519m.g Eutrema salsugineum HOM05D003389 ORTHO05D003917 4.9e-24 117.9 160 39.4
C01p17500 Brassica napus HOM05D003389 ORTHO05D003917 1.1e-23 116.7 160 37.5
BolC1t01690H Brassica oleracea HOM05D003389 ORTHO05D003917 3.1e-23 115.2 162 37.7
Migut.A00906 Erythranthe guttata HOM05D003389 ORTHO05D003917 3.1e-23 115.2 186 36.0
A01p14230 Brassica napus HOM05D003389 ORTHO05D003917 9.2e-23 113.6 174 36.8
BraA01t01370Z Brassica rapa HOM05D003389 ORTHO05D003917 1.2e-22 113.2 174 36.8
Sp7g21050 Schrenkiella parvula HOM05D003389 ORTHO05D003917 3.5e-22 111.7 175 35.4
FAN09G4798 Fragaria x ananassa HOM05D003389 ORTHO05D003917 1.0e-21 110.2 163 38.7
Actinidia14499 Actinidia chinensis HOM05D003389 ORTHO05D003917 8.6e-21 107.1 105 51.4
Rhsim11G0008000 Rhododendron simsii HOM05D003389 ORTHO05D003917 1.1e-20 106.7 134 44.0
Eucgr.D01938 Eucalyptus grandis HOM05D003389 ORTHO05D003917 1.5e-20 106.3 89 55.1
BcaNung01008 Brassica carinata HOM05D003389 ORTHO05D003917 1.9e-20 105.9 160 36.2
HanXRQChr02g0043491 Helianthus annuus HOM05D003389 ORTHO05D003917 3.3e-20 105.1 159 38.4
Glyma.04G257602 Glycine max HOM05D003389 ORTHO05D003917 4.3e-20 104.8 130 42.3
Aa31LG6G5010 Aethionema arabicum HOM05D003389 ORTHO05D003917 5.6e-20 104.4 154 38.3
Lj2C201G3 Lonicera japonica HOM05D003389 ORTHO05D003917 9.5e-20 103.6 129 44.2
vmacro00214 Vaccinium macrocarpon HOM05D003389 ORTHO05D003917 9.5e-20 103.6 87 56.3
Cpa.g.sc29.32 Carica papaya HOM05D003389 ORTHO05D003917 1.6e-19 102.8 89 56.2
TPR.G19581 Trifolium pratense HOM05D003389 ORTHO05D003917 1.6e-19 102.8 89 55.1
COL.COLO4_23793 Corchorus olitorius HOM05D003389 ORTHO05D003917 3.6e-19 101.7 129 44.2
DCAR_008431 Daucus carota HOM05D003389 ORTHO05D003917 3.6e-19 101.7 94 51.1
Glyma.03G264902 Glycine max HOM05D003389 ORTHO05D003917 3.6e-19 101.7 130 41.5
MD04G1069800 Malus domestica HOM05D003389 ORTHO05D003917 3.6e-19 101.7 89 53.9
DCAR_006771 Daucus carota HOM05D000526 ORTHO05D003917 8.0e-19 100.5 91 52.7
CDE12G0302 Ceratophyllum demersum HOM05D003389 ORTHO05D003917 1.4e-18 99.8 109 48.6
MD06G1071200 Malus domestica HOM05D003389 ORTHO05D003917 1.4e-18 99.8 87 54.0
Nitab4.5_0001714g0090 Nicotiana tabacum HOM05D003389 ORTHO05D003917 1.8e-18 99.4 100 49.0
Lalb_Chr05g0214741 Lupinus albus HOM05D003389 ORTHO05D003917 2.3e-18 99.0 87 55.2
MELO3C005619.2 Cucumis melo HOM05D003389 ORTHO05D003917 3.0e-18 98.6 87 52.9
TAR636G0614 Trochodendron aralioides HOM05D003389 ORTHO05D003917 3.0e-18 98.6 87 54.0
ClCG01G003270 Citrullus lanatus HOM05D003389 ORTHO05D003917 4.0e-18 98.2 87 52.9
Lj2C200G2 Lonicera japonica HOM05D003389 ORTHO05D003917 4.0e-18 98.2 105 48.6
BraA03t14599Z Brassica rapa HOM05D003389 ORTHO05D003917 1.2e-17 96.7 175 36.0
BraA03t14615Z Brassica rapa HOM05D003389 ORTHO05D003917 1.2e-17 96.7 175 36.0
CBR_g38139 Chara braunii HOM05D003389 ORTHO05D003917 1.2e-17 96.7 133 39.8
FAN09G1540 Fragaria x ananassa HOM05D003389 ORTHO05D003917 5.7e-17 94.4 111 46.8
Lj8A241G19 Lonicera japonica HOM05D003389 ORTHO05D003917 9.8e-17 93.6 89 51.7
PSO170G2389 Papaver somniferum HOM05D003389 ORTHO05D003917 1.7e-16 92.8 174 33.9
AL7G30560 Arabidopsis lyrata HOM05D003389 ORTHO05D003917 2.2e-16 92.4 163 33.1
PSO302G0081 Papaver somniferum HOM05D003389 ORTHO05D003917 8.3e-16 90.5 174 32.8
AT4G22960 Arabidopsis thaliana HOM05D003389 ORTHO05D003917 2.4e-15 89.0 193 33.7
Migut.A00905 Erythranthe guttata HOM05D003389 ORTHO05D003917 2.4e-15 89.0 93 44.1
Haze_08980 Corylus avellana HOM05D003389 ORTHO05D003917 7.0e-15 87.4 193 32.1
Zm00001eb272510 Zea mays HOM05D003389 ORTHO05D003917 9.2e-15 87.0 86 46.5
HanXRQChr02g0043501 Helianthus annuus HOM05D003389 ORTHO05D003917 1.2e-14 86.7 157 31.8
TPR.G14842 Trifolium pratense HOM05D003389 ORTHO05D003917 2.7e-14 85.5 103 42.7
Carub.0007s1831 Capsella rubella HOM05D003389 ORTHO05D003917 3.5e-14 85.1 163 35.6
CDE12G0774 Ceratophyllum demersum HOM05D003389 ORTHO05D003917 3.5e-14 85.1 113 46.0
Hma1.2p1_0138F.1_g062730 Hydrangea macrophylla HOM05D003389 ORTHO05D003917 3.5e-14 85.1 111 41.4
TAR636G1472 Trochodendron aralioides HOM05D003389 ORTHO05D003917 7.8e-14 84.0 110 42.7
TAR636G3266 Trochodendron aralioides HOM05D003389 ORTHO05D003917 1.7e-13 82.8 129 39.5
MBI04_g06622_MAGBIO Magnolia biondii HOM05D003389 ORTHO05D003917 5.0e-13 81.3 110 40.9
Rhsim11G0008100 Rhododendron simsii HOM05D003389 ORTHO05D003917 7.3e-12 77.4 169 32.5
Eucgr.D01937 Eucalyptus grandis HOM05D003389 ORTHO05D003917 4.7e-11 74.7 189 33.3
Cfa025567 Carpinus fangiana HOM05D003389 ORTHO05D003917 6.8e-10 70.9 90 40.0
FAN09G0964 Fragaria x ananassa HOM05D003389 ORTHO05D003917 6.8e-10 70.9 149 34.9
DCAR_022882 Daucus carota HOM05D003389 ORTHO05D003917 1.2e-09 70.1 132 32.6
Os06g0721600 Oryza sativa ssp. japonica HOM05D003389 ORTHO05D020930 1.5e-09 69.7 156 30.1
Os06g0723400 Oryza sativa ssp. japonica HOM05D003389 ORTHO05D020930 1.5e-09 69.7 156 30.1
Zm00001eb033290 Zea mays HOM05D003389 ORTHO05D003917 1.3e-08 66.6 160 31.9
AagrBONN_evm.TU.Sc2ySwM_362.1756 Anthoceros agrestis HOM05D003389 ORTHO05D003917 1.4e-07 63.2 78 41.0
SGA_v2.0_scaffold555G52910 Striga asiatica HOM05D024566 ORTHO05D020930 1.6e-06 59.7 137 31.4


User provided reference genes

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