Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 1.7e-284 982.2 602 100.0
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 1.5e-41 175.3 314 33.8
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 4.3e-41 173.7 308 35.7
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 1.2e-38 165.6 299 34.8
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.1e-36 159.1 261 36.0
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 1.8e-36 158.3 307 32.9
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.4e-36 156.8 300 34.7
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 7.0e-36 156.4 266 35.7
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 7.0e-36 156.4 300 34.3
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 9.2e-36 156.0 300 34.7
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 2.0e-35 154.8 300 35.0
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 5.9e-35 153.3 298 34.6
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 1.0e-34 152.5 301 34.6
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 1.1e-33 149.1 307 32.2
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 1.9e-33 148.3 292 32.9
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 2.5e-33 147.9 309 31.7
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 2.5e-33 147.9 302 32.5
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 3.3e-33 147.5 266 32.7
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 4.3e-33 147.1 259 33.2
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 5.6e-33 146.7 299 30.4
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 9.5e-33 146.0 305 31.8
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 1.2e-32 145.6 312 31.1
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 2.8e-32 144.4 269 31.2
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 2.8e-32 144.4 307 31.9
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 4.7e-32 143.7 307 31.6
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 4.7e-32 143.7 277 33.6
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 8.0e-32 142.9 305 31.1
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 8.0e-32 142.9 307 30.3
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 1.8e-31 141.7 260 32.7
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 1.8e-31 141.7 266 32.7
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 2.3e-31 141.4 258 32.6
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 2.3e-31 141.4 300 31.0
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 4.0e-31 140.6 259 33.2
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 6.8e-31 139.8 311 29.9
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 8.9e-31 139.4 307 32.9
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 1.5e-30 138.7 270 33.3
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 2.6e-30 137.9 257 33.1
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 2.6e-30 137.9 259 32.4
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 2.6e-30 137.9 301 31.2
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 3.4e-30 137.5 309 30.1
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 4.4e-30 137.1 266 31.2
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 4.4e-30 137.1 300 30.7
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 4.4e-30 137.1 304 30.3
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 5.8e-30 136.7 307 30.6
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 7.5e-30 136.3 257 33.5
PRCOL_00001147 Prasinoderma coloniale HOM05D003570 ORTHO05D004207 9.8e-30 136.0 306 30.1
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 1.3e-29 135.6 307 30.9
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 1.3e-29 135.6 266 31.6
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 1.7e-29 135.2 310 30.3
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 2.2e-29 134.8 266 32.0
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 2.9e-29 134.4 268 31.7
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 4.9e-29 133.7 263 31.9
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.9e-29 133.7 298 29.9
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 6.4e-29 133.3 299 30.4
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 1.1e-28 132.5 307 30.0
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 1.1e-28 132.5 299 29.8
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 1.4e-28 132.1 298 30.2
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 1.4e-28 132.1 274 29.6
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 2.4e-28 131.3 270 32.2
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 2.4e-28 131.3 261 31.4
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 2.4e-28 131.3 317 29.0
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 3.2e-28 131.0 250 32.4
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 5.4e-28 130.2 252 32.1
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 5.4e-28 130.2 263 31.2
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 7.0e-28 129.8 220 35.0
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 7.0e-28 129.8 270 31.9
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 9.2e-28 129.4 297 30.3
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 9.2e-28 129.4 250 33.2
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 9.2e-28 129.4 264 31.1
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 1.6e-27 128.6 298 29.9
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 2.0e-27 128.3 270 30.4
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 2.0e-27 128.3 301 30.2
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 1.0e-26 125.9 296 29.4
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 1.3e-26 125.6 301 30.6
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 1.3e-26 125.6 309 29.8
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 1.3e-26 125.6 305 29.5
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 1.7e-26 125.2 253 32.8
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.3e-26 124.8 231 32.5
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 3.0e-26 124.4 256 29.3
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 3.0e-26 124.4 258 30.6
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 3.9e-26 124.0 301 30.6
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 5.0e-26 123.6 277 31.4
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 1.5e-25 122.1 277 29.6
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.3e-25 120.6 268 30.2
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 4.3e-25 120.6 198 34.8
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 7.3e-25 119.8 301 28.2
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 9.5e-25 119.4 290 29.3
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 1.2e-24 119.0 290 29.3
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 1.2e-24 119.0 290 29.3
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 1.2e-24 119.0 290 29.3
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 4.7e-24 117.1 301 27.6
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 4.7e-24 117.1 306 28.4
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 6.2e-24 116.7 260 27.7
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 6.2e-24 116.7 306 29.1
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 8.1e-24 116.3 292 28.8
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 2.3e-23 114.8 309 29.1
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 5.2e-23 113.6 231 29.4
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 1.2e-22 112.5 261 31.0
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.2e-22 112.5 219 32.9
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.5e-22 112.1 302 29.1
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 1.5e-22 112.1 268 29.9
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 2.6e-22 111.3 297 28.3
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 3.4e-22 110.9 256 29.7
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 4.4e-22 110.5 292 29.5
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 1.7e-21 108.6 264 29.5
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 2.2e-21 108.2 305 26.6
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 2.2e-21 108.2 260 28.8
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 2.9e-21 107.8 198 33.3
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 4.9e-21 107.1 294 26.5
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 8.3e-21 106.3 307 25.7
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 5.4e-20 103.6 230 28.7
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 6.0e-19 100.1 212 29.7
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 1.7e-18 98.6 318 27.4
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 3.9e-18 97.4 182 34.6
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 3.3e-17 94.4 179 30.7
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 4.7e-16 90.5 298 28.5
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 1.4e-15 89.0 183 32.2
CSS0045431 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 1.8e-15 88.6 156 36.5
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 1.8e-15 88.6 178 31.5
Haze_20779 Corylus avellana HOM05D003570 ORTHO05D004207 1.9e-12 78.6 123 37.4
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 5.1e-10 70.5 109 36.7
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.5e-09 68.9 255 25.1
Sopen04g013730 Solanum pennellii HOM05D003570 ORTHO05D004207 3.3e-09 67.8 129 30.2
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 7.3e-09 66.6 84 40.5
FvH4_5g15750 Fragaria vesca HOM05D003570 ORTHO05D004207 2.1e-08 65.1 57 52.6
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 2.4e-07 61.6 95 34.7
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 2.4e-07 61.6 87 37.9
EL10Ac8g19584 Beta vulgaris HOM05D003570 ORTHO05D004207 3.1e-07 61.2 123 30.1
AagrBONN_evm.TU.Sc2ySwM_344.4464 Anthoceros agrestis HOM05D003570 ORTHO05D004207 5.2e-07 60.5 154 29.2


User provided reference genes

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