Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g299750 Chlamydomonas reinhardtii HOM05D004100 ORTHO05D004781 1.6e-33 145.6 76 100.0
PRCOL_00003613 Prasinoderma coloniale HOM05D004100 ORTHO05D004781 1.3e-11 72.8 80 52.5
Mapoly0015s0116 Marchantia polymorpha HOM05D004100 ORTHO05D004781 4.9e-11 70.9 78 47.4
arahy.Tifrunner.gnm1.ann1.0J6FIX Arachis hypogaea HOM05D004100 ORTHO05D004781 4.1e-10 67.8 78 48.7
arahy.Tifrunner.gnm1.ann1.7Y0XMR Arachis hypogaea HOM05D004100 ORTHO05D004781 4.1e-10 67.8 78 48.7
Cfa017271 Carpinus fangiana HOM05D004100 ORTHO05D004781 7.1e-10 67.0 78 51.3
Lsat_1_v5_gn_1_35860 Lactuca sativa HOM05D004100 ORTHO05D004781 7.1e-10 67.0 76 50.0
ECA238G3287 Erigeron canadensis HOM05D004100 ORTHO05D004781 1.2e-09 66.2 78 48.7
FAN09G3480 Fragaria x ananassa HOM05D004100 ORTHO05D004781 1.2e-09 66.2 77 46.8
HanXRQChr07g0202251 Helianthus annuus HOM05D004100 ORTHO05D004781 1.2e-09 66.2 78 47.4
SMO117G0142 Selaginella moellendorffii HOM05D004100 ORTHO05D004781 1.2e-09 66.2 76 48.7
FvH4_6g12280 Fragaria vesca HOM05D004100 ORTHO05D004781 1.6e-09 65.9 78 47.4
QL07p036366 Quercus lobata HOM05D004100 ORTHO05D004781 1.6e-09 65.9 77 49.4
Eucgr.E00256 Eucalyptus grandis HOM05D004100 ORTHO05D004781 2.1e-09 65.5 78 47.4
FvH4_7g23790 Fragaria vesca HOM05D004100 ORTHO05D004781 2.1e-09 65.5 78 50.0
RcHm_v2.0_Chr1g0369131 Rosa chinensis HOM05D004100 ORTHO05D004781 2.1e-09 65.5 78 50.0
Ciclev10010082m.g Citrus clementina HOM05D004100 ORTHO05D004781 2.7e-09 65.1 78 47.4
DCAR_027562 Daucus carota HOM05D004100 ORTHO05D004781 2.7e-09 65.1 78 47.4
Sc11g0006410 Simmondsia chinensis HOM05D004100 ORTHO05D004781 2.7e-09 65.1 78 48.7
PSO384G2084 Papaver somniferum HOM05D004100 ORTHO05D004781 3.5e-09 64.7 78 47.4
PSO585G0025 Papaver somniferum HOM05D004100 ORTHO05D004781 3.5e-09 64.7 78 47.4
Lalb_Chr18g0052831 Lupinus albus HOM05D004100 ORTHO05D004781 4.6e-09 64.3 78 47.4
Manes.07G124300 Manihot esculenta HOM05D004100 ORTHO05D004781 4.6e-09 64.3 78 47.4
RcHm_v2.0_Chr3g0464081 Rosa chinensis HOM05D004100 ORTHO05D004781 4.6e-09 64.3 78 47.4
Actinidia07713 Actinidia chinensis HOM05D004100 ORTHO05D004781 6.0e-09 63.9 78 50.0
Actinidia13907 Actinidia chinensis HOM05D004100 ORTHO05D004781 6.0e-09 63.9 78 50.0
arahy.Tifrunner.gnm1.ann1.97IM7W Arachis hypogaea HOM05D004100 ORTHO05D004781 6.0e-09 63.9 77 46.8
COL.COLO4_25607 Corchorus olitorius HOM05D004100 ORTHO05D004781 6.0e-09 63.9 79 46.8
CSS0048931 Camellia sinensis var. sinensis HOM05D004100 ORTHO05D004781 7.8e-09 63.5 78 50.0
Lalb_Chr15g0084391 Lupinus albus HOM05D004100 ORTHO05D004781 7.8e-09 63.5 78 46.2
Os09g0326850 Oryza sativa ssp. japonica HOM05D004100 ORTHO05D004781 7.8e-09 63.5 79 44.3
CiPaw.02G189000 Carya illinoinensis HOM05D004100 ORTHO05D004781 1.0e-08 63.2 78 47.4
Hma1.2p1_0026F.1_g016830 Hydrangea macrophylla HOM05D004100 ORTHO05D004781 1.0e-08 63.2 78 44.9
Nn2g11332 Nelumbo nucifera HOM05D004100 ORTHO05D004781 1.0e-08 63.2 78 43.6
Phvul.008G227500 Phaseolus vulgaris HOM05D004100 ORTHO05D004781 1.0e-08 63.2 78 46.2
Potri.008G063000 Populus trichocarpa HOM05D004100 ORTHO05D004781 1.0e-08 63.2 78 48.7
Prupe.6G268700 Prunus persica HOM05D004100 ORTHO05D004781 1.0e-08 63.2 77 49.4
Rhsim03G0139100 Rhododendron simsii HOM05D004100 ORTHO05D004781 1.0e-08 63.2 78 48.7
GSVIVG01016389001 Vitis vinifera HOM05D004100 ORTHO05D004781 1.0e-08 63.2 78 44.9
MSTRG.234 Avicennia marina HOM05D004100 ORTHO05D004781 1.3e-08 62.8 78 44.9
Carub.0004s1994 Capsella rubella HOM05D004100 ORTHO05D004781 1.3e-08 62.8 79 45.6
CARHR132530 Cardamine hirsuta HOM05D004100 ORTHO05D004781 1.3e-08 62.8 79 45.6
CARHR150630 Cardamine hirsuta HOM05D004100 ORTHO05D004781 1.3e-08 62.8 79 45.6
Potri.010G194400 Populus trichocarpa HOM05D004100 ORTHO05D004781 1.3e-08 62.8 78 47.4
PGR044G2436 Punica granatum HOM05D004100 ORTHO05D004781 1.3e-08 62.8 78 47.4
Sed0020785 Sechium edule HOM05D004100 ORTHO05D004781 1.3e-08 62.8 78 47.4
Glyma.02G253300 Glycine max HOM05D004100 ORTHO05D004781 1.7e-08 62.4 78 46.2
Gohir.A05G346300 Gossypium hirsutum HOM05D004100 ORTHO05D004781 1.7e-08 62.4 78 47.4
Gohir.D04G065900 Gossypium hirsutum HOM05D004100 ORTHO05D004781 1.7e-08 62.4 78 46.2
Gorai.012G074300 Gossypium raimondii HOM05D004100 ORTHO05D004781 1.7e-08 62.4 78 46.2
Hma1.2p1_0026F.1_g016860 Hydrangea macrophylla HOM05D004100 ORTHO05D004781 1.7e-08 62.4 78 44.9
Manes.10G019000 Manihot esculenta HOM05D004100 ORTHO05D004781 1.7e-08 62.4 78 44.9
Ca_05921_v3 Cicer arietinum L. HOM05D004100 ORTHO05D004781 2.3e-08 62.0 78 46.2
Duzib114G0906 Durio zibethinus HOM05D004100 ORTHO05D004781 2.3e-08 62.0 78 46.2
Glyma.11G226100 Glycine max HOM05D004100 ORTHO05D004781 2.3e-08 62.0 78 46.2
SalBow1G1269 Salvia bowleyana HOM05D004100 ORTHO05D004781 2.3e-08 62.0 78 44.9
BcaB02g09230 Brassica carinata HOM05D004100 ORTHO05D004781 3.0e-08 61.6 79 44.3
BraA05t19768Z Brassica rapa HOM05D004100 ORTHO05D004781 3.0e-08 61.6 79 44.3
CiPaw.01G294400 Carya illinoinensis HOM05D004100 ORTHO05D004781 3.0e-08 61.6 78 46.2
Glyma.14G063100 Glycine max HOM05D004100 ORTHO05D004781 3.0e-08 61.6 78 46.2
Sabra10G0149500 Salix brachista HOM05D004100 ORTHO05D004781 3.0e-08 61.6 78 47.4
Sed0017691 Sechium edule HOM05D004100 ORTHO05D004781 3.0e-08 61.6 78 46.2
Thecc.10G028200 Theobroma cacao HOM05D004100 ORTHO05D004781 3.0e-08 61.6 78 44.9
TAR369G1064 Trochodendron aralioides HOM05D004100 ORTHO05D004781 3.0e-08 61.6 78 46.2
Cc02_g07040 Coffea canephora HOM05D004100 ORTHO05D004781 3.9e-08 61.2 78 43.6
Gohir.D13G018200 Gossypium hirsutum HOM05D004100 ORTHO05D004781 3.9e-08 61.2 78 46.2
MCO12G437 Micromonas commoda HOM05D004100 ORTHO05D004781 3.9e-08 61.2 80 46.2
Sabra16G0106200 Salix brachista HOM05D004100 ORTHO05D004781 3.9e-08 61.2 78 46.2
Solyc08g082695.1 Solanum lycopersicum HOM05D004100 ORTHO05D004781 3.9e-08 61.2 78 44.9
Sopen08g030920 Solanum pennellii HOM05D004100 ORTHO05D004781 3.9e-08 61.2 78 44.9
Aqoxy6G01946 Aquilegia oxysepala HOM05D004100 ORTHO05D004781 5.1e-08 60.8 78 46.2
AL4G34950 Arabidopsis lyrata HOM05D004100 ORTHO05D004781 5.1e-08 60.8 79 44.3
AT2G37975 Arabidopsis thaliana HOM05D004100 ORTHO05D004781 5.1e-08 60.8 79 44.3
CAN.G567.29 Capsicum annuum HOM05D004100 ORTHO05D004781 5.1e-08 60.8 78 44.9
CDE05G3529 Ceratophyllum demersum HOM05D004100 ORTHO05D004781 5.1e-08 60.8 78 46.2
Glyma.18G031200 Glycine max HOM05D004100 ORTHO05D004781 5.1e-08 60.8 78 44.9
Lalb_Chr04g0250821 Lupinus albus HOM05D004100 ORTHO05D004781 5.1e-08 60.8 78 42.3
TWI63G1110 Tripterygium wilfordii HOM05D004100 ORTHO05D004781 5.1e-08 60.8 78 44.9
vmacro10075 Vaccinium macrocarpon HOM05D004100 ORTHO05D004781 5.1e-08 60.8 78 47.4
Aqoxy2G00841 Aquilegia oxysepala HOM05D004100 ORTHO05D004781 6.6e-08 60.5 77 45.5
CAN.G689.7 Capsicum annuum HOM05D004100 ORTHO05D004781 6.6e-08 60.5 78 41.0
Duzib093G2045 Durio zibethinus HOM05D004100 ORTHO05D004781 6.6e-08 60.5 78 43.6
MD12G1158300 Malus domestica HOM05D004100 ORTHO05D004781 6.6e-08 60.5 78 47.4
Oeu055822.1 Olea europaea HOM05D004100 ORTHO05D004781 6.6e-08 60.5 78 47.4
TWI74G1404 Tripterygium wilfordii HOM05D004100 ORTHO05D004781 6.6e-08 60.5 78 46.2
vmacro16617 Vaccinium macrocarpon HOM05D004100 ORTHO05D004781 6.6e-08 60.5 78 47.4
Aa31sc250G10 Aethionema arabicum HOM05D004100 ORTHO05D004781 8.7e-08 60.1 79 45.6
Eucgr.G03237 Eucalyptus grandis HOM05D004100 ORTHO05D004781 8.7e-08 60.1 78 46.2
Glyma.01G109600 Glycine max HOM05D004100 ORTHO05D004781 8.7e-08 60.1 78 46.2
Glyma.03G074700 Glycine max HOM05D004100 ORTHO05D004781 8.7e-08 60.1 78 46.2
MD04G1144200 Malus domestica HOM05D004100 ORTHO05D004781 8.7e-08 60.1 78 46.2
Medtr5g081650 Medicago truncatula HOM05D004100 ORTHO05D004781 8.7e-08 60.1 78 44.9
Os03g0331900 Oryza sativa ssp. japonica HOM05D004100 ORTHO05D004781 8.7e-08 60.1 79 41.8
Sed0001470 Sechium edule HOM05D004100 ORTHO05D004781 8.7e-08 60.1 78 47.4
unitig_0.g234 Utricularia gibba HOM05D004100 ORTHO05D004781 8.7e-08 60.1 78 44.9
Gohir.A13G017100 Gossypium hirsutum HOM05D004100 ORTHO05D004781 1.1e-07 59.7 78 44.9
Medtr4g019160 Medicago truncatula HOM05D004100 ORTHO05D004781 1.1e-07 59.7 78 46.2
Rhsim09G0171200 Rhododendron simsii HOM05D004100 ORTHO05D004781 1.1e-07 59.7 78 46.2
THA.LOC104805700 Tarenaya hassleriana HOM05D004100 ORTHO05D004781 1.1e-07 59.7 78 44.9
TPR.G8047 Trifolium pratense HOM05D004100 ORTHO05D004781 1.1e-07 59.7 78 44.9
TWI53G1956 Tripterygium wilfordii HOM05D004100 ORTHO05D004781 1.1e-07 59.7 78 44.9
arahy.Tifrunner.gnm1.ann1.YUBK9J Arachis hypogaea HOM05D004100 ORTHO05D004781 1.5e-07 59.3 78 43.6
BcaB01g03736 Brassica carinata HOM05D000076 ORTHO05D001377 1.5e-07 59.3 79 43.0
BolC3t14861H Brassica oleracea HOM05D000076 ORTHO05D001377 1.5e-07 59.3 79 43.0
BraA03t11338Z Brassica rapa HOM05D000076 ORTHO05D001377 1.5e-07 59.3 79 43.0
ClCG11G006500 Citrullus lanatus HOM05D004100 ORTHO05D004781 1.5e-07 59.3 73 46.6
Migut.F01567 Erythranthe guttata HOM05D004100 ORTHO05D004781 1.5e-07 59.3 79 43.0
Manes.08G084000 Manihot esculenta HOM05D004100 ORTHO05D004781 1.5e-07 59.3 78 43.6
Sp4g20290 Schrenkiella parvula HOM05D004100 ORTHO05D004781 1.5e-07 59.3 79 43.0
TPR.G8216 Trifolium pratense HOM05D004100 ORTHO05D004781 1.5e-07 59.3 78 46.2
AL5G35090 Arabidopsis lyrata HOM05D004100 ORTHO05D004781 1.9e-07 58.9 79 46.8
AT3G54085 Arabidopsis thaliana HOM05D004100 ORTHO05D004781 1.9e-07 58.9 79 46.8
CiPaw.09G204500 Carya illinoinensis HOM05D004100 ORTHO05D004781 1.9e-07 58.9 78 46.2
SalBow6G6247 Salvia bowleyana HOM05D004100 ORTHO05D004781 1.9e-07 58.9 74 43.2
GSVIVG01013495001 Vitis vinifera HOM05D004100 ORTHO05D004781 1.9e-07 58.9 78 43.6
Gorai.013G020200 Gossypium raimondii HOM05D004100 ORTHO05D004781 2.5e-07 58.5 78 44.9
THA.LOC104816861 Tarenaya hassleriana HOM05D004100 ORTHO05D004781 2.5e-07 58.5 78 46.2
CARHR163970 Cardamine hirsuta HOM05D004100 ORTHO05D004781 3.3e-07 58.2 79 45.6
Lj6g0000528 Lotus japonicus HOM05D004100 ORTHO05D004781 3.3e-07 58.2 78 42.3
Nn2g13575 Nelumbo nucifera HOM05D004100 ORTHO05D004781 3.3e-07 58.2 75 42.7
Phvul.001G239400 Phaseolus vulgaris HOM05D004100 ORTHO05D004781 3.3e-07 58.2 78 42.3
Phvul.010G006600 Phaseolus vulgaris HOM05D004100 ORTHO05D004781 3.3e-07 58.2 78 46.2
Pp3c6_2550 Physcomitrium patens HOM05D004100 ORTHO05D004781 3.3e-07 58.2 78 44.9
ClCG10G021700 Citrullus lanatus HOM05D004100 ORTHO05D004781 4.3e-07 57.8 78 46.2
Thhalv10017760m.g Eutrema salsugineum HOM05D004100 ORTHO05D004781 4.3e-07 57.8 79 43.0
Pp3c5_27310 Physcomitrium patens HOM05D004100 ORTHO05D004781 4.3e-07 57.8 78 44.9
Psat2g035960 Pisum sativum HOM05D004100 ORTHO05D004781 4.3e-07 57.8 78 43.6
TAR623G1136 Trochodendron aralioides HOM05D004100 ORTHO05D004781 4.3e-07 57.8 78 44.9
A04p29120 Brassica napus HOM05D004100 ORTHO05D004781 5.6e-07 57.4 79 41.8
BolC4t28139H Brassica oleracea HOM05D000076 ORTHO05D001377 5.6e-07 57.4 79 41.8
BraA04t18382Z Brassica rapa HOM05D000076 ORTHO05D001377 5.6e-07 57.4 79 41.8
Carub.0005s2067 Capsella rubella HOM05D004100 ORTHO05D004781 5.6e-07 57.4 79 44.3
Duzib128G1203 Durio zibethinus HOM05D004100 ORTHO05D004781 5.6e-07 57.4 78 43.6
Potri.016G109500 Populus trichocarpa HOM05D004100 ORTHO05D004781 5.6e-07 57.4 72 43.1
Aa31sc516G30 Aethionema arabicum HOM05D004100 ORTHO05D004781 7.3e-07 57.0 79 44.3
CSS0037675 Camellia sinensis var. sinensis HOM05D004100 ORTHO05D004781 7.3e-07 57.0 74 43.2
Ah.10g030410 Amaranthus hybridus HOM05D004100 ORTHO05D004781 9.6e-07 56.6 78 42.3
CANSAT35G1936 Cannabis sativa HOM05D004100 ORTHO05D004781 9.6e-07 56.6 79 43.0
Migut.I01038 Erythranthe guttata HOM05D004100 ORTHO05D004781 9.6e-07 56.6 78 41.0
Thhalv10010931m.g Eutrema salsugineum HOM05D004100 ORTHO05D004781 9.6e-07 56.6 79 43.0
Nn6g33749 Nelumbo nucifera HOM05D004100 ORTHO05D004781 9.6e-07 56.6 76 40.8
Psat7g242160 Pisum sativum HOM05D004100 ORTHO05D004781 9.6e-07 56.6 76 47.4
Thecc.05G024300 Theobroma cacao HOM05D004100 ORTHO05D004781 9.6e-07 56.6 78 43.6
Atru.chr8.2126 Acer truncatum HOM05D004100 ORTHO05D004781 1.2e-06 56.2 78 42.3
CiPaw.10G153500 Carya illinoinensis HOM05D004100 ORTHO05D004781 1.2e-06 56.2 78 42.3
Duzib128G0469 Durio zibethinus HOM05D004100 ORTHO05D004781 1.2e-06 56.2 78 43.6
MELO3C009201.2 Cucumis melo HOM05D004100 ORTHO05D004781 2.1e-06 55.5 78 46.2
Sed0010532 Sechium edule HOM05D004100 ORTHO05D004781 2.1e-06 55.5 78 42.3
Ciclev10013247m.g Citrus clementina HOM05D004100 ORTHO05D004781 2.8e-06 55.1 78 42.3
A09p47070 Brassica napus HOM05D004100 ORTHO05D004781 3.6e-06 54.7 79 43.0
CSS0011416 Camellia sinensis var. sinensis HOM05D004100 ORTHO05D004781 3.6e-06 54.7 78 41.0
CSS0039007 Camellia sinensis var. sinensis HOM05D004100 ORTHO05D004781 3.6e-06 54.7 77 41.6
Prupe.2G244600 Prunus persica HOM05D004100 ORTHO05D004781 4.7e-06 54.3 78 43.6
Prupe.6G268600 Prunus persica HOM05D004100 ORTHO05D004781 4.7e-06 54.3 73 43.8
PGR031G0718 Punica granatum HOM05D004100 ORTHO05D004781 8.1e-06 53.5 78 41.0


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