Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g295826 Chlamydomonas reinhardtii HOM05D005796 ORTHO05D007054 1.5e-258 896.0 562 100.0
SEGI_40570 Sequoiadendron giganteum HOM05D005796 ORTHO05D007054 4.6e-13 80.5 129 31.8
MCO14G168 Micromonas commoda HOM05D005796 ORTHO05D007054 7.8e-13 79.7 143 32.2
Sed0020047 Sechium edule HOM05D005796 ORTHO05D007054 1.3e-12 79.0 129 31.8
Mapoly0029s0058 Marchantia polymorpha HOM05D005796 ORTHO05D007054 1.7e-12 78.6 128 32.8
MELO3C002210.2 Cucumis melo HOM05D005796 ORTHO05D007054 3.0e-12 77.8 129 31.8
CsaV3_1G007940 Cucumis sativus L. HOM05D005796 ORTHO05D007054 3.0e-12 77.8 129 31.8
TWI60G1143 Tripterygium wilfordii HOM05D005796 ORTHO05D007054 3.9e-12 77.4 137 29.2
ATR0665G316 Amborella trichopoda HOM05D005796 ORTHO05D007054 1.5e-11 75.5 162 27.2
ClCG01G014370 Citrullus lanatus HOM05D005796 ORTHO05D007054 1.5e-11 75.5 129 31.0
Dinv38663 Davidia involucrata HOM05D005796 ORTHO05D007054 1.9e-11 75.1 137 27.0
Ca_21851_v3 Cicer arietinum L. HOM05D005796 ORTHO05D007054 4.3e-11 73.9 128 29.7
Actinidia04922 Actinidia chinensis HOM05D005796 ORTHO05D007054 5.6e-11 73.6 137 29.2
Hund02671 Selenicereus undatus HOM05D005796 ORTHO05D007054 9.5e-11 72.8 129 31.0
Aqoxy3G00785 Aquilegia oxysepala HOM05D005796 ORTHO05D007054 1.6e-10 72.0 129 30.2
Hma1.2p1_0002F.1_g003270 Hydrangea macrophylla HOM05D005796 ORTHO05D007054 1.6e-10 72.0 137 27.7
Nitab4.5_0005402g0010 Nicotiana tabacum HOM05D005796 ORTHO05D007054 1.6e-10 72.0 129 27.9
PGSC0003DMG400025332 Solanum tuberosum HOM05D005796 ORTHO05D007054 2.1e-10 71.6 129 27.9
arahy.Tifrunner.gnm1.ann1.U2VSD4 Arachis hypogaea HOM05D005796 ORTHO05D007054 2.8e-10 71.2 129 29.5
FAN18G3372 Fragaria x ananassa HOM05D005796 ORTHO05D007054 2.8e-10 71.2 129 28.7
EL10Ac5g10940 Beta vulgaris HOM05D005796 ORTHO05D007054 3.6e-10 70.9 129 31.0
CANSAT80G0862 Cannabis sativa HOM05D005796 ORTHO05D007054 3.6e-10 70.9 129 27.9
Duzib084G0674 Durio zibethinus HOM05D005796 ORTHO05D007054 3.6e-10 70.9 129 27.1
SGA_v2.0_scaffold7G04086 Striga asiatica HOM05D005796 ORTHO05D007054 3.6e-10 70.9 129 27.9
AUR62008352 Chenopodium quinoa HOM05D005796 ORTHO05D007054 4.7e-10 70.5 129 29.5
Peaxi162Scf00009g00426 Petunia axillaris HOM05D005796 ORTHO05D007054 4.7e-10 70.5 129 27.9
RcHm_v2.0_Chr7g0180561 Rosa chinensis HOM05D005796 ORTHO05D007054 4.7e-10 70.5 129 27.9
Solyc03g113280.3 Solanum lycopersicum HOM05D005796 ORTHO05D007054 4.7e-10 70.5 129 27.1
TAR481G0014 Trochodendron aralioides HOM05D005796 ORTHO05D007054 4.7e-10 70.5 128 29.7
arahy.Tifrunner.gnm1.ann1.NXA9BP Arachis hypogaea HOM05D005796 ORTHO05D007054 6.2e-10 70.1 130 31.5
TPR.G38380 Trifolium pratense HOM05D005796 ORTHO05D007054 6.2e-10 70.1 128 27.3
FAN13G2643 Fragaria x ananassa HOM05D005796 ORTHO05D007054 8.1e-10 69.7 129 27.9
Gorai.001G073800 Gossypium raimondii HOM05D005796 ORTHO05D007054 8.1e-10 69.7 129 27.9
Nitab4.5_0004605g0110 Nicotiana tabacum HOM05D005796 ORTHO05D007054 8.1e-10 69.7 129 27.9
AagrBONN_evm.TU.Sc2ySwM_228.2536 Anthoceros agrestis HOM05D005796 ORTHO05D007054 1.1e-09 69.3 128 31.2
FAN04G0326 Fragaria x ananassa HOM05D005796 ORTHO05D007054 1.1e-09 69.3 138 26.8
Migut.D01857 Erythranthe guttata HOM05D005796 ORTHO05D007054 1.4e-09 68.9 129 27.1
Glyma.17G096600 Glycine max HOM05D005796 ORTHO05D007054 1.4e-09 68.9 129 28.7
Medtr4g107630 Medicago truncatula HOM05D005796 ORTHO05D007054 1.4e-09 68.9 128 28.1
MBI03_g20464_MAGBIO Magnolia biondii HOM05D005796 ORTHO05D007054 1.8e-09 68.6 128 28.1
Phvul.003G193000 Phaseolus vulgaris HOM05D005796 ORTHO05D007054 1.8e-09 68.6 129 27.1
Gohir.A07G065400 Gossypium hirsutum HOM05D005796 ORTHO05D007054 2.3e-09 68.2 129 27.1
Oeu048731.1 Olea europaea HOM05D005796 ORTHO05D007054 3.1e-09 67.8 142 23.9
PGR083G2169 Punica granatum HOM05D005796 ORTHO05D007054 3.1e-09 67.8 131 28.2
A06p19660 Brassica napus HOM05D005796 ORTHO05D007054 4.0e-09 67.4 128 29.7
BraA06t25046Z Brassica rapa HOM05D005796 ORTHO05D007054 4.0e-09 67.4 128 29.7
ECA247G3495 Erigeron canadensis HOM05D005796 ORTHO05D007054 4.0e-09 67.4 128 28.1
BcaB02g09676 Brassica carinata HOM05D005796 ORTHO05D007054 5.2e-09 67.0 131 27.5
BcaB02g09686 Brassica carinata HOM05D005796 ORTHO05D007054 5.2e-09 67.0 131 27.5
A01p25720 Brassica napus HOM05D005796 ORTHO05D007054 6.8e-09 66.6 130 29.2
Sopen03g032340 Solanum pennellii HOM05D005796 ORTHO05D007054 6.8e-09 66.6 129 26.4
BraA01t02488Z Brassica rapa HOM05D005796 ORTHO05D007054 8.9e-09 66.2 130 30.0
Cre11.g467679 Chlamydomonas reinhardtii HOM05D019738 ORTHO05D022279 8.9e-09 66.2 163 31.3
PSO017G2472 Papaver somniferum HOM05D005796 ORTHO05D007054 8.9e-09 66.2 129 24.8
PSO478G3339 Papaver somniferum HOM05D005796 ORTHO05D007054 8.9e-09 66.2 129 24.8
Potri.015G065500 Populus trichocarpa HOM05D005796 ORTHO05D007054 8.9e-09 66.2 129 27.9
C01p32410 Brassica napus HOM05D005796 ORTHO05D007054 1.2e-08 65.9 130 29.2
BolC1t03180H Brassica oleracea HOM05D005796 ORTHO05D007054 1.2e-08 65.9 130 29.2
HanXRQChr02g0045201 Helianthus annuus HOM05D005796 ORTHO05D007054 1.2e-08 65.9 150 24.0
MD14G1193900 Malus domestica HOM05D005796 ORTHO05D007054 1.2e-08 65.9 129 30.2
VMungo1215G0702 Vigna mungo HOM05D005796 ORTHO05D007054 1.2e-08 65.9 129 27.1
SalBow7G0869 Salvia bowleyana HOM05D005796 ORTHO05D007054 2.0e-08 65.1 112 31.2
AT3G47980 Arabidopsis thaliana HOM05D005796 ORTHO05D007054 2.6e-08 64.7 129 27.1
BcaB05g22893 Brassica carinata HOM05D005796 ORTHO05D007054 2.6e-08 64.7 129 27.1
Sabra15G0090700 Salix brachista HOM05D005796 ORTHO05D007054 2.6e-08 64.7 129 26.4
Lj4g0017253 Lotus japonicus HOM05D005796 ORTHO05D007054 3.4e-08 64.3 129 26.4
Lj9A459G48 Lonicera japonica HOM05D005796 ORTHO05D007054 1.7e-07 62.0 130 27.7
CDE02G2117 Ceratophyllum demersum HOM05D005796 ORTHO05D007054 2.2e-07 61.6 128 24.2
AUR62021745 Chenopodium quinoa HOM05D005796 ORTHO05D007054 2.2e-07 61.6 121 28.1
COL.COLO4_37386 Corchorus olitorius HOM05D005796 ORTHO05D007054 2.2e-07 61.6 112 29.5
PGR083G0992 Punica granatum HOM05D005796 ORTHO05D007054 2.2e-07 61.6 120 34.2
Gohir.D07G069900 Gossypium hirsutum HOM05D005796 ORTHO05D007054 2.9e-07 61.2 129 27.1
MD06G1187500 Malus domestica HOM05D005796 ORTHO05D007054 4.9e-07 60.5 128 25.8
BcaB01g00857 Brassica carinata HOM05D005796 ORTHO05D007054 6.4e-07 60.1 112 30.4
unitig_899.g15402 Utricularia gibba HOM05D003955 ORTHO05D004684 4.1e-06 57.4 136 22.8
Lsat_1_v5_gn_1_10700 Lactuca sativa HOM05D005796 ORTHO05D007054 7.1e-06 56.6 146 24.0
BcaC09g49836 Brassica carinata HOM05D005796 ORTHO05D007054 9.2e-06 56.2 113 30.1
BcaNung07157 Brassica carinata HOM05D005796 ORTHO05D007054 9.2e-06 56.2 113 30.1


User provided reference genes

Program Settings