Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g285700 Chlamydomonas reinhardtii HOM05D003493 ORTHO05D003980 0.0e+00 2728.7 2237 100.0
A02p18540 Brassica napus HOM05D003493 ORTHO05D003980 2.7e-08 66.6 117 29.1
C02p30730 Brassica napus HOM05D003493 ORTHO05D003980 2.7e-08 66.6 117 29.1
BolC2t09128H Brassica oleracea HOM05D003493 ORTHO05D003980 2.7e-08 66.6 117 29.1
BraA02t06893Z Brassica rapa HOM05D003493 ORTHO05D003980 2.7e-08 66.6 117 29.1
Pp3c6_14220 Physcomitrium patens HOM05D003493 ORTHO05D003980 4.6e-08 65.9 112 26.8
A07p39150 Brassica napus HOM05D003493 ORTHO05D003980 1.0e-07 64.7 117 28.2
BolC6t39773H Brassica oleracea HOM05D003493 ORTHO05D003980 1.0e-07 64.7 117 28.2
BraA07t31464Z Brassica rapa HOM05D003493 ORTHO05D003980 1.0e-07 64.7 117 28.2
arahy.Tifrunner.gnm1.ann1.ZVJ3VC Arachis hypogaea HOM05D003493 ORTHO05D003980 3.9e-07 62.8 96 28.1
C06p47340 Brassica napus HOM05D003493 ORTHO05D003980 3.9e-07 62.8 117 26.5
THA.LOC104812198 Tarenaya hassleriana HOM05D003493 ORTHO05D003980 3.9e-07 62.8 117 26.5
Pp3c5_12280 Physcomitrium patens HOM05D003493 ORTHO05D003980 5.1e-07 62.4 93 29.0
VMungo0720G0805 Vigna mungo HOM05D003493 ORTHO05D003980 5.1e-07 62.4 117 25.6
HanXRQChr08g0220881 Helianthus annuus HOM05D003493 ORTHO05D003980 6.7e-07 62.0 93 26.9
Cfa017818 Carpinus fangiana HOM05D003493 ORTHO05D003980 8.8e-07 61.6 96 28.1
Haze_18391 Corylus avellana HOM05D003493 ORTHO05D003980 8.8e-07 61.6 96 28.1
Sp5g28170 Schrenkiella parvula HOM05D003493 ORTHO05D003980 8.8e-07 61.6 106 26.4
ATR0124G004 Amborella trichopoda HOM05D003493 ORTHO05D003980 1.1e-06 61.2 106 26.4
Hma1.2p1_0807F.1_g221460 Hydrangea macrophylla HOM05D003493 ORTHO05D003980 1.1e-06 61.2 106 23.6
Prupe.5G246400 Prunus persica HOM05D003493 ORTHO05D003980 1.5e-06 60.8 91 28.6
Lsat_1_v5_gn_0_10721 Lactuca sativa HOM05D003493 ORTHO05D003980 2.0e-06 60.5 124 26.6
Dinv11742 Davidia involucrata HOM05D003493 ORTHO05D003980 2.5e-06 60.1 106 25.5
CSS0005530 Camellia sinensis var. sinensis HOM05D003493 ORTHO05D003980 4.3e-06 59.3 106 25.5
CANSAT80G2441 Cannabis sativa HOM05D003493 ORTHO05D003980 4.3e-06 59.3 117 24.8
Thhalv10018153m.g Eutrema salsugineum HOM05D003493 ORTHO05D003980 4.3e-06 59.3 117 24.8
FvH4_5g18670 Fragaria vesca HOM05D003493 ORTHO05D003980 4.3e-06 59.3 91 28.6
FAN08G2984 Fragaria x ananassa HOM05D003493 ORTHO05D003980 4.3e-06 59.3 91 28.6
FAN18G2761 Fragaria x ananassa HOM05D003493 ORTHO05D003980 4.3e-06 59.3 91 28.6
Glyma.10G174700 Glycine max HOM05D003493 ORTHO05D003980 4.3e-06 59.3 117 23.9
Peaxi162Scf01390g00035 Petunia axillaris HOM05D003493 ORTHO05D003980 4.3e-06 59.3 109 25.7
Potri.017G155000 Populus trichocarpa HOM05D003493 ORTHO05D003980 4.3e-06 59.3 96 28.1
CAN.G65.58 Capsicum annuum HOM05D003493 ORTHO05D003980 5.7e-06 58.9 106 22.6
Ciclev10019478m.g Citrus clementina HOM05D003493 ORTHO05D003980 5.7e-06 58.9 96 28.1
Glyma.16G209600 Glycine max HOM05D003493 ORTHO05D003980 5.7e-06 58.9 121 25.6
Gohir.A05G111700 Gossypium hirsutum HOM05D003493 ORTHO05D003980 5.7e-06 58.9 93 26.9
Gorai.009G116400 Gossypium raimondii HOM05D003493 ORTHO05D003980 5.7e-06 58.9 93 26.9
MD14G1000100 Malus domestica HOM05D003493 ORTHO05D003980 5.7e-06 58.9 91 27.5
Nitab4.5_0004170g0020 Nicotiana tabacum HOM05D003493 ORTHO05D003980 5.7e-06 58.9 96 26.0
MCO11G907 Micromonas commoda HOM05D003493 ORTHO05D003980 7.4e-06 58.5 174 27.0
Peaxi162Scf00643g00431 Petunia axillaris HOM05D003493 ORTHO05D003980 7.4e-06 58.5 106 24.5
arahy.Tifrunner.gnm1.ann1.W71D15 Arachis hypogaea HOM05D003493 ORTHO05D003980 9.7e-06 58.2 82 30.5
Gohir.A05G111401 Gossypium hirsutum HOM05D003493 ORTHO05D003980 9.7e-06 58.2 93 26.9
Gohir.D05G112200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 9.7e-06 58.2 93 26.9
Gohir.D06G188200 Gossypium hirsutum HOM05D003493 ORTHO05D003980 9.7e-06 58.2 93 26.9
Gorai.010G220600 Gossypium raimondii HOM05D003493 ORTHO05D003980 9.7e-06 58.2 93 26.9
Medtr1g077470 Medicago truncatula HOM05D003493 ORTHO05D003980 9.7e-06 58.2 117 24.8
Nitab4.5_0000854g0120 Nicotiana tabacum HOM05D003493 ORTHO05D003980 9.7e-06 58.2 119 23.5
Psat6g054360 Pisum sativum HOM05D003493 ORTHO05D003980 9.7e-06 58.2 117 26.5
RcHm_v2.0_Chr7g0176841 Rosa chinensis HOM05D003493 ORTHO05D003980 9.7e-06 58.2 91 27.5
PGSC0003DMG400015207 Solanum tuberosum HOM05D003493 ORTHO05D003980 9.7e-06 58.2 96 25.0
Thecc.06G006900 Theobroma cacao HOM05D003493 ORTHO05D003980 9.7e-06 58.2 93 25.8
TWI81G0199 Tripterygium wilfordii HOM05D003493 ORTHO05D003980 9.7e-06 58.2 106 22.6


User provided reference genes

Program Settings