Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 1.1e-95 353.6 214 100.0
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 4.4e-33 145.6 197 39.6
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 4.9e-32 142.1 197 38.6
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 6.4e-32 141.7 196 40.3
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.4e-31 140.6 197 38.6
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 1.9e-31 140.2 197 39.1
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.4e-31 139.8 197 37.6
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 2.4e-31 139.8 194 38.7
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 3.2e-31 139.4 194 38.7
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 3.2e-31 139.4 197 38.6
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 3.2e-31 139.4 197 38.1
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 7.0e-31 138.3 197 38.1
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 9.2e-31 137.9 197 38.1
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 1.2e-30 137.5 197 36.5
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 1.2e-30 137.5 197 38.1
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 1.2e-30 137.5 197 37.1
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 1.6e-30 137.1 196 37.8
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 1.6e-30 137.1 200 37.5
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 1.6e-30 137.1 196 36.7
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 2.0e-30 136.7 197 37.6
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 2.0e-30 136.7 197 38.1
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 2.7e-30 136.3 194 37.6
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 2.7e-30 136.3 197 36.5
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 2.7e-30 136.3 197 37.1
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 2.7e-30 136.3 197 37.6
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 4.6e-30 135.6 194 37.6
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 4.6e-30 135.6 197 37.6
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 4.6e-30 135.6 197 36.5
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 6.0e-30 135.2 196 36.7
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 6.0e-30 135.2 197 37.1
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 6.0e-30 135.2 196 37.2
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 7.8e-30 134.8 196 37.8
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 7.8e-30 134.8 196 37.2
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 7.8e-30 134.8 197 38.6
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 7.8e-30 134.8 194 37.6
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 7.8e-30 134.8 196 36.7
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.0e-29 134.4 197 35.0
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 1.0e-29 134.4 197 37.1
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 1.0e-29 134.4 193 36.8
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 1.3e-29 134.0 197 36.5
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 1.7e-29 133.7 196 37.2
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 1.7e-29 133.7 196 37.2
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 1.7e-29 133.7 196 37.2
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.7e-29 133.7 197 37.1
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 1.7e-29 133.7 197 37.1
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 1.7e-29 133.7 197 38.1
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 2.3e-29 133.3 197 35.5
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 2.3e-29 133.3 196 38.3
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 3.0e-29 132.9 197 37.1
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 3.0e-29 132.9 196 36.7
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 3.0e-29 132.9 197 37.6
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 3.9e-29 132.5 193 37.3
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.9e-29 132.5 197 36.5
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 3.9e-29 132.5 197 36.5
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 6.6e-29 131.7 196 36.2
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 6.6e-29 131.7 197 35.5
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 8.6e-29 131.3 197 36.0
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 8.6e-29 131.3 197 36.0
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 1.1e-28 131.0 197 37.1
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 1.1e-28 131.0 197 34.5
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 1.5e-28 130.6 193 37.3
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 1.5e-28 130.6 194 37.1
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.5e-28 130.6 187 38.5
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.5e-28 130.6 196 35.2
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.5e-28 130.6 196 35.2
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 1.5e-28 130.6 197 34.5
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.5e-28 130.6 197 36.0
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 2.5e-28 129.8 196 36.2
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 3.3e-28 129.4 197 34.0
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 4.3e-28 129.0 194 37.6
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 5.6e-28 128.6 205 36.1
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 9.5e-28 127.9 197 35.0
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.6e-27 127.1 197 35.0
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.8e-27 126.3 198 35.4
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 6.2e-27 125.2 197 35.5
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 6.2e-27 125.2 198 35.9
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 8.1e-27 124.8 225 33.8
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 8.1e-27 124.8 225 33.8
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 8.1e-27 124.8 197 33.5
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.1e-26 124.4 194 35.6
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 1.4e-26 124.0 197 34.5
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 5.2e-26 122.1 181 37.0
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 5.2e-26 122.1 182 37.4
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 6.8e-26 121.7 182 38.5
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.2e-25 120.9 181 37.0
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.2e-25 120.9 181 36.5
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 3.4e-25 119.4 222 32.9
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 4.4e-25 119.0 189 38.1
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 7.5e-25 118.2 173 38.7
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 7.5e-25 118.2 182 35.7
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 7.5e-25 118.2 165 40.0
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 9.8e-25 117.9 223 33.6
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 1.3e-24 117.5 204 35.8
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.7e-24 117.1 197 34.5
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 3.7e-24 115.9 197 35.5
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 4.9e-24 115.5 197 35.0
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 6.4e-24 115.2 173 37.0
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 8.3e-24 114.8 197 35.0
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.4e-23 114.0 197 35.0
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.9e-23 113.6 130 45.4
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 2.4e-23 113.2 194 33.5
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 2.4e-23 113.2 130 45.4
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.4e-23 113.2 182 34.6
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 4.6e-22 109.0 127 44.9
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.1e-20 104.4 102 51.0
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 1.2e-19 100.9 97 52.6
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 6.2e-19 98.6 181 34.3
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 2.0e-17 93.6 81 56.8
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 2.6e-17 93.2 115 42.6
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 7.6e-17 91.7 184 32.6
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 9.2e-15 84.7 105 43.8
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 6.6e-13 78.6 101 41.6
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 3.4e-09 66.2 63 49.2
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 2.2e-08 63.5 212 24.1
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 2.9e-08 63.2 49 61.2
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 5.4e-07 58.9 129 24.8
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 9.3e-07 58.2 172 26.7


User provided reference genes

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