Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g278258 Chlamydomonas reinhardtii HOM05D006498 ORTHO05D006377 3.1e-163 578.9 427 100.0
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 7.5e-08 62.8 100 42.0
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 7.5e-08 62.8 100 42.0
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 7.5e-08 62.8 100 42.0
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 2.2e-07 61.2 91 41.8
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 4.9e-07 60.1 100 40.0
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 4.9e-07 60.1 100 40.0
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 4.9e-07 60.1 100 38.0
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 4.9e-07 60.1 101 39.6
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 6.3e-07 59.7 100 39.0
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 8.3e-07 59.3 120 37.5
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 1.1e-06 58.9 100 38.0
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 1.1e-06 58.9 100 38.0
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 1.4e-06 58.5 100 38.0
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 1.4e-06 58.5 100 41.0
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 1.4e-06 58.5 100 40.0
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 1.4e-06 58.5 100 40.0
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 1.4e-06 58.5 100 40.0
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 1.4e-06 58.5 100 37.0
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 1.8e-06 58.2 90 42.2
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 1.8e-06 58.2 101 37.6
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 1.8e-06 58.2 100 40.0
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 2.4e-06 57.8 145 34.5
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 2.4e-06 57.8 100 37.0
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 2.4e-06 57.8 102 41.2
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 2.4e-06 57.8 90 41.1
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 3.2e-06 57.4 89 40.4
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 3.2e-06 57.4 90 37.8
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 3.2e-06 57.4 90 41.1
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 3.2e-06 57.4 90 37.8
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 4.1e-06 57.0 100 39.0
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 4.1e-06 57.0 105 40.0
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 4.1e-06 57.0 147 31.3
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 4.1e-06 57.0 100 36.0
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 5.4e-06 56.6 100 38.0
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 5.4e-06 56.6 120 36.7
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 5.4e-06 56.6 120 36.7
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 5.4e-06 56.6 100 36.0
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 5.4e-06 56.6 100 38.0
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 5.4e-06 56.6 100 39.0
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 7.0e-06 56.2 102 40.2
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 7.0e-06 56.2 65 44.6
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 9.2e-06 55.8 90 40.0


User provided reference genes

Program Settings