Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g269550 Chlamydomonas reinhardtii HOM05D005557 ORTHO05D006748 3.2e-89 332.0 205 100.0
Pp3c26_10620 Physcomitrium patens HOM05D005557 ORTHO05D006748 1.2e-30 137.5 150 44.0
Mapoly0016s0081 Marchantia polymorpha HOM05D005557 ORTHO05D006748 8.2e-29 131.3 163 44.2
SEGI_32471 Sequoiadendron giganteum HOM05D005557 ORTHO05D006748 4.1e-28 129.0 150 42.7
MSTRG.10500 Avicennia marina HOM05D005557 ORTHO05D006748 2.7e-27 126.3 150 42.7
Migut.J00918 Erythranthe guttata HOM05D005557 ORTHO05D006748 5.9e-27 125.2 153 39.2
Lj7A689T78 Lonicera japonica HOM05D005557 ORTHO05D006748 3.8e-26 122.5 150 38.7
MD02G1257100 Malus domestica HOM05D005557 ORTHO05D006748 3.8e-26 122.5 150 39.3
Peaxi162Scf00880g00018 Petunia axillaris HOM05D005557 ORTHO05D006748 8.5e-26 121.3 150 40.0
Cc06_g12460 Coffea canephora HOM05D005557 ORTHO05D006748 1.1e-25 120.9 150 40.7
Manes.03G042000 Manihot esculenta HOM05D005557 ORTHO05D006748 2.5e-25 119.8 142 40.8
SMO364G0522 Selaginella moellendorffii HOM05D005557 ORTHO05D006748 2.5e-25 119.8 125 43.2
Potri.006G139800 Populus trichocarpa HOM05D005557 ORTHO05D006748 3.2e-25 119.4 150 40.0
CDE05G0257 Ceratophyllum demersum HOM05D005557 ORTHO05D006748 5.5e-25 118.6 150 38.7
PGSC0003DMG400016040 Solanum tuberosum HOM05D005557 ORTHO05D006748 7.2e-25 118.2 150 39.3
TAR626G1135 Trochodendron aralioides HOM05D005557 ORTHO05D006748 7.2e-25 118.2 150 40.7
arahy.Tifrunner.gnm1.ann1.568RE3 Arachis hypogaea HOM05D005557 ORTHO05D006748 9.4e-25 117.9 144 39.6
Sc18g0002770 Simmondsia chinensis HOM05D005557 ORTHO05D006748 9.4e-25 117.9 137 40.9
arahy.Tifrunner.gnm1.ann1.C56SYK Arachis hypogaea HOM05D005557 ORTHO05D006748 1.2e-24 117.5 144 39.6
Zm00001eb019520 Zea mays HOM05D005557 ORTHO05D006748 1.2e-24 117.5 151 37.1
Glyma.13G111700 Glycine max HOM05D005557 ORTHO05D006748 1.6e-24 117.1 150 40.0
Solyc07g042150.3 Solanum lycopersicum HOM05D005557 ORTHO05D006748 1.6e-24 117.1 150 38.7
Aqoxy3G00735 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 2.1e-24 116.7 150 41.3
RcHm_v2.0_Chr1g0332351 Rosa chinensis HOM05D005557 ORTHO05D006748 2.1e-24 116.7 150 37.3
Hund26090 Selenicereus undatus HOM05D005557 ORTHO05D006748 2.1e-24 116.7 144 40.3
TWI32G1325 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 2.1e-24 116.7 150 38.0
FAN03G2003 Fragaria x ananassa HOM05D005557 ORTHO05D006748 2.7e-24 116.3 142 38.7
MD07G1063400 Malus domestica HOM05D005557 ORTHO05D006748 3.6e-24 115.9 150 38.0
Aqoxy7G00284 Aquilegia oxysepala HOM05D005557 ORTHO05D006748 4.7e-24 115.5 150 41.3
CSS0008332 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 4.7e-24 115.5 150 38.0
CSS0017494 Camellia sinensis var. sinensis HOM05D005557 ORTHO05D006748 4.7e-24 115.5 150 38.0
TWI63G1120 Tripterygium wilfordii HOM05D005557 ORTHO05D006748 4.7e-24 115.5 152 37.5
Hma1.2p1_0169F.1_g074410 Hydrangea macrophylla HOM05D005557 ORTHO05D006748 6.1e-24 115.2 150 40.0
Prupe.2G075400 Prunus persica HOM05D005557 ORTHO05D006748 6.1e-24 115.2 150 36.7
QL11p001232 Quercus lobata HOM05D005557 ORTHO05D006748 6.1e-24 115.2 150 38.7
HPP92_013279 Vanilla planifolia HOM05D005557 ORTHO05D006748 6.1e-24 115.2 150 37.3
Os03g0405100 Oryza sativa ssp. japonica HOM05D005557 ORTHO05D006748 8.0e-24 114.8 151 37.7
SalBow6G3747 Salvia bowleyana HOM05D005557 ORTHO05D006748 8.0e-24 114.8 149 37.6
Sopen07g021740 Solanum pennellii HOM05D005557 ORTHO05D006748 8.0e-24 114.8 150 38.0
SGA_v2.0_scaffold31G12665 Striga asiatica HOM05D005557 ORTHO05D006748 8.0e-24 114.8 150 39.3
Ca_09310_v3 Cicer arietinum L. HOM05D005557 ORTHO05D006748 1.0e-23 114.4 155 36.1
Eucgr.C00788 Eucalyptus grandis HOM05D005557 ORTHO05D006748 1.0e-23 114.4 150 39.3
FvH4_7g05500 Fragaria vesca HOM05D005557 ORTHO05D006748 1.0e-23 114.4 150 37.3
FAN01G0749 Fragaria x ananassa HOM05D005557 ORTHO05D006748 1.0e-23 114.4 150 37.3
FAN10G4084 Fragaria x ananassa HOM05D005557 ORTHO05D006748 1.0e-23 114.4 150 37.3
PSO386G0114 Papaver somniferum HOM05D005557 ORTHO05D006748 1.4e-23 114.0 142 41.5
Nitab4.5_0000343g0390 Nicotiana tabacum HOM05D005557 ORTHO05D006748 1.8e-23 113.6 150 38.0
Phvul.003G129500 Phaseolus vulgaris HOM05D005557 ORTHO05D006748 1.8e-23 113.6 150 38.0
GSVIVG01015048001 Vitis vinifera HOM05D005557 ORTHO05D006748 1.8e-23 113.6 150 37.3
AagrBONN_evm.TU.Sc2ySwM_228.5739 Anthoceros agrestis HOM05D005557 ORTHO05D006748 2.3e-23 113.2 125 44.0
Glyma.17G048000 Glycine max HOM05D005557 ORTHO05D006748 2.3e-23 113.2 150 38.7
SGA_v2.0_scaffold296G47553 Striga asiatica HOM05D005557 ORTHO05D006748 2.3e-23 113.2 150 38.0
THA.LOC104815688 Tarenaya hassleriana HOM05D005557 ORTHO05D006748 2.3e-23 113.2 140 39.3
Cfa002966 Carpinus fangiana HOM05D000173 ORTHO05D006748 3.0e-23 112.8 150 38.0
DCAR_024765 Daucus carota HOM05D005557 ORTHO05D006748 3.0e-23 112.8 150 37.3
Carub.0001s1877 Capsella rubella HOM05D005557 ORTHO05D006748 4.0e-23 112.5 123 43.1
COL.COLO4_18069 Corchorus olitorius HOM05D005557 ORTHO05D006748 4.0e-23 112.5 150 38.7
Nitab4.5_0008784g0050 Nicotiana tabacum HOM05D005557 ORTHO05D006748 4.0e-23 112.5 150 38.7
Rhsim05G0005000 Rhododendron simsii HOM05D000173 ORTHO05D006748 4.0e-23 112.5 134 41.0
Thhalv10008278m.g Eutrema salsugineum HOM05D005557 ORTHO05D006748 5.2e-23 112.1 143 39.9
Lsat_1_v5_gn_5_139800 Lactuca sativa HOM05D005557 ORTHO05D006748 5.2e-23 112.1 150 36.0
Gohir.A06G078200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 6.8e-23 111.7 150 38.0
PGR142G2674 Punica granatum HOM05D005557 ORTHO05D006748 6.8e-23 111.7 150 36.7
Sabra06G0109200 Salix brachista HOM05D005557 ORTHO05D006748 6.8e-23 111.7 150 38.0
Sp1g17050 Schrenkiella parvula HOM05D005557 ORTHO05D006748 6.8e-23 111.7 140 40.0
VMungo1215G1068 Vigna mungo HOM05D005557 ORTHO05D006748 8.8e-23 111.3 150 36.7
BcaB07g31927 Brassica carinata HOM05D005557 ORTHO05D006748 1.2e-22 110.9 143 39.9
CANSAT56G3371 Cannabis sativa HOM05D005557 ORTHO05D006748 1.2e-22 110.9 150 36.7
Ciclev10009013m.g Citrus clementina HOM05D005557 ORTHO05D006748 1.2e-22 110.9 150 37.3
Gorai.010G090300 Gossypium raimondii HOM05D005557 ORTHO05D006748 1.2e-22 110.9 150 38.0
CANSAT56G2230 Cannabis sativa HOM05D005557 ORTHO05D006748 1.5e-22 110.5 150 36.7
Cpa.g.sc28.12 Carica papaya HOM05D005557 ORTHO05D006748 1.5e-22 110.5 150 36.7
CiPaw.03G203700 Carya illinoinensis HOM05D005557 ORTHO05D006748 1.5e-22 110.5 150 36.0
Medtr4g125000 Medicago truncatula HOM05D005557 ORTHO05D006748 1.5e-22 110.5 145 39.3
BcaC05g25811 Brassica carinata HOM05D005557 ORTHO05D006748 2.0e-22 110.2 123 41.5
Atru.chr7.1734 Acer truncatum HOM05D005557 ORTHO05D006748 2.6e-22 109.8 150 35.3
Lj4g0021187 Lotus japonicus HOM05D005557 ORTHO05D006748 2.6e-22 109.8 150 36.0
EL10Ac8g19008 Beta vulgaris HOM05D005557 ORTHO05D006748 3.4e-22 109.4 163 37.4
CsaV3_1G041220 Cucumis sativus L. HOM05D005557 ORTHO05D006748 3.4e-22 109.4 150 36.0
Dinv42413 Davidia involucrata HOM05D005557 ORTHO05D006748 3.4e-22 109.4 150 37.3
AL1G31720 Arabidopsis lyrata HOM05D005557 ORTHO05D006748 4.4e-22 109.0 140 40.0
Actinidia30238 Actinidia chinensis HOM05D005557 ORTHO05D006748 5.7e-22 108.6 150 36.7
A06p15270 Brassica napus HOM05D005557 ORTHO05D006748 5.7e-22 108.6 144 40.3
BolC5t30454H Brassica oleracea HOM05D005557 ORTHO05D006748 5.7e-22 108.6 124 41.9
BraA06t24641Z Brassica rapa HOM05D005557 ORTHO05D006748 5.7e-22 108.6 144 40.3
Sed0003389 Sechium edule HOM05D005557 ORTHO05D006748 5.7e-22 108.6 150 35.3
Actinidia39641 Actinidia chinensis HOM05D005557 ORTHO05D006748 7.5e-22 108.2 154 37.0
AT1G19140 Arabidopsis thaliana HOM05D005557 ORTHO05D006748 7.5e-22 108.2 140 40.0
AUR62028302 Chenopodium quinoa HOM05D005557 ORTHO05D006748 7.5e-22 108.2 150 36.0
ECA234G3626 Erigeron canadensis HOM05D005557 ORTHO05D006748 7.5e-22 108.2 150 36.7
Lalb_Chr07g0181281 Lupinus albus HOM05D005557 ORTHO05D006748 7.5e-22 108.2 150 36.0
C05p17510 Brassica napus HOM05D005557 ORTHO05D006748 9.8e-22 107.8 124 41.9
CARHR019740 Cardamine hirsuta HOM05D005557 ORTHO05D006748 9.8e-22 107.8 143 39.2
BcaB03g12934 Brassica carinata HOM05D005557 ORTHO05D006748 1.7e-21 107.1 143 39.9
Thecc.08G180200 Theobroma cacao HOM05D005557 ORTHO05D006748 1.7e-21 107.1 150 36.7
Dinv25539 Davidia involucrata HOM05D005557 ORTHO05D006748 2.2e-21 106.7 150 38.7
Gohir.D06G077200 Gossypium hirsutum HOM05D005557 ORTHO05D006748 2.2e-21 106.7 134 39.6
TPR.G12564 Trifolium pratense HOM05D005557 ORTHO05D006748 2.8e-21 106.3 149 37.6
Aa31LG7G3880 Aethionema arabicum HOM05D005557 ORTHO05D006748 3.7e-21 105.9 140 37.9
CAN.G32.9 Capsicum annuum HOM05D005557 ORTHO05D006748 3.7e-21 105.9 150 37.3
Duzib187G0437 Durio zibethinus HOM05D005557 ORTHO05D006748 3.7e-21 105.9 150 36.7
BcaC07g38981 Brassica carinata HOM05D005557 ORTHO05D006748 4.8e-21 105.5 143 37.8
FAN10G0153 Fragaria x ananassa HOM05D005557 ORTHO05D006748 8.3e-21 104.8 150 36.7
BolC8t49542H Brassica oleracea HOM05D005557 ORTHO05D006748 1.1e-20 104.4 144 38.2
C08p19230 Brassica napus HOM05D005557 ORTHO05D006748 1.8e-20 103.6 144 38.2
Lalb_Chr13g0299361 Lupinus albus HOM05D005557 ORTHO05D006748 1.8e-20 103.6 150 35.3
A08p29990 Brassica napus HOM05D005557 ORTHO05D006748 3.1e-20 102.8 144 37.5
MBI13_g00696_MAGBIO Magnolia biondii HOM05D005557 ORTHO05D006748 3.1e-20 102.8 182 31.3
ClCG03G014930 Citrullus lanatus HOM05D005557 ORTHO05D006748 4.1e-20 102.4 150 34.0
HanXRQChr12g0354431 Helianthus annuus HOM05D005557 ORTHO05D006748 4.1e-20 102.4 160 35.6
CBR_g19881 Chara braunii HOM05D005557 ORTHO05D006748 7.0e-20 101.7 111 44.1
BraA08t34934Z Brassica rapa HOM05D005557 ORTHO05D006748 9.1e-20 101.3 144 36.8
ATR1100G017 Amborella trichopoda HOM05D005557 ORTHO05D006748 1.6e-19 100.5 111 45.0
PRCOL_00004586 Prasinoderma coloniale HOM05D005557 ORTHO05D006748 4.5e-19 99.0 154 37.0
vmacro17121 Vaccinium macrocarpon HOM05D000173 ORTHO05D006748 5.9e-19 98.6 174 32.2
Duzib168G0027 Durio zibethinus HOM05D005557 ORTHO05D006748 7.7e-19 98.2 150 36.0
TAR624G0952 Trochodendron aralioides HOM05D005557 ORTHO05D006748 3.8e-18 95.9 112 40.2
Haze_26037 Corylus avellana HOM05D000173 ORTHO05D000316 8.6e-18 94.7 111 40.5
MELO3C015535.2 Cucumis melo HOM05D005557 ORTHO05D006748 1.5e-17 94.0 171 31.0
unitig_85.g27246 Utricularia gibba HOM05D005557 ORTHO05D006748 7.2e-17 91.7 140 30.7
AUR62025296 Chenopodium quinoa HOM05D005557 ORTHO05D006748 1.6e-16 90.5 110 37.3
Psat7g057840 Pisum sativum HOM05D005557 ORTHO05D006748 2.1e-16 90.1 111 37.8
BcaB03g12932 Brassica carinata HOM05D005557 ORTHO05D006748 1.4e-15 87.4 164 32.3
arahy.Tifrunner.gnm1.ann1.CV9S7K Arachis hypogaea HOM05D005557 ORTHO05D006748 2.6e-14 83.2 86 44.2
arahy.Tifrunner.gnm1.ann1.56M64E Arachis hypogaea HOM05D005557 ORTHO05D006748 8.3e-13 78.2 86 41.9
SHI52085 Sapria himalayana HOM05D005557 ORTHO05D006748 1.1e-12 77.8 121 36.4
arahy.Tifrunner.gnm1.ann1.WCQ4SR Arachis hypogaea HOM05D005557 ORTHO05D006748 3.1e-12 76.3 94 42.6
arahy.Tifrunner.gnm1.ann1.67TMSF Arachis hypogaea HOM05D005557 ORTHO05D006748 1.6e-11 73.9 66 48.5
MCO02G393 Micromonas commoda HOM05D005557 ORTHO05D006748 9.5e-09 64.7 152 29.6
arahy.Tifrunner.gnm1.ann1.L7J4LP Arachis hypogaea HOM05D005557 ORTHO05D006748 1.2e-06 57.8 42 54.8


User provided reference genes

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