Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre06.g255850 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 0.0e+00 1880.9 1045 100.0
Cre09.g400900 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 0.0e+00 1880.9 1045 100.0
Cre17.g730817 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 0.0e+00 1880.9 1045 100.0
Cre12.g490950 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 0.0e+00 1880.5 1045 99.9
Cre16.g672700 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 0.0e+00 1845.9 1045 98.1
Cre02.g144008 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 0.0e+00 1137.1 1045 70.1
Cre06.g278232 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 0.0e+00 1137.1 1045 70.1
Cre10.g453200 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 0.0e+00 1137.1 1045 70.1
Cre08.g358545 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 0.0e+00 1115.1 603 100.0
Cre17.g697850 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 0.0e+00 1115.1 603 100.0
Cre08.g379150 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 1.4e-201 707.6 404 98.8
Cre08.g379187 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 1.4e-201 707.6 404 98.8
Cre08.g358544 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 6.2e-173 612.5 363 100.0
Cre03.g146367 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 7.1e-60 236.9 788 26.4
Cre17.g698299 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 7.1e-60 236.9 788 26.4
Cre17.g711350 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 7.1e-60 236.9 788 26.4
Cre17.g738650 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 3.5e-59 234.6 730 26.8
Cre11.g469550 Chlamydomonas reinhardtii HOM05D011198 ORTHO05D011433 3.4e-46 191.4 98 100.0
SEGI_19406 Sequoiadendron giganteum HOM05D018084 ORTHO05D011433 1.0e-29 136.7 287 28.9
Mapoly0009s0034 Marchantia polymorpha HOM05D018084 ORTHO05D011433 1.3e-24 119.8 575 23.3
SMO014G0040 Selaginella moellendorffii HOM05D011646 ORTHO05D012698 4.7e-19 101.3 297 26.3
SEGI_10442 Sequoiadendron giganteum HOM05D018084 ORTHO05D011433 1.8e-18 99.4 192 30.2
SEGI_29891 Sequoiadendron giganteum HOM05D018084 ORTHO05D011433 1.1e-17 96.7 226 27.9
Mapoly0108s0035 Marchantia polymorpha HOM05D023157 ORTHO05D011433 7.0e-15 87.4 272 22.8
Mapoly0064s0086 Marchantia polymorpha HOM05D023157 ORTHO05D011433 4.5e-14 84.7 258 23.3
Ciclev10013753m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.5e-12 77.8 274 24.1
Mapoly0014s0089 Marchantia polymorpha HOM05D023157 ORTHO05D011433 1.2e-11 76.6 249 22.5
AagrBONN_evm.TU.Sc2ySwM_117.1641 Anthoceros agrestis HOM05D018084 ORTHO05D011433 4.7e-11 74.7 287 23.0
CANSAT54G2521 Cannabis sativa HOM05D000254 ORTHO05D000165 8.0e-11 73.9 273 23.4
CANSAT01G2927 Cannabis sativa HOM05D000254 ORTHO05D000165 1.0e-10 73.6 273 23.4
Mapoly0131s0008 Marchantia polymorpha HOM05D023157 ORTHO05D011433 2.0e-09 69.3 168 23.8
Ciclev10017601m.g Citrus clementina HOM05D000254 ORTHO05D000165 2.6e-09 68.9 266 22.6
CANSAT11G2418 Cannabis sativa HOM05D000254 ORTHO05D000165 5.7e-09 67.8 266 22.6
Ciclev10013598m.g Citrus clementina HOM05D000254 ORTHO05D000165 5.7e-09 67.8 266 21.8
SMO141G0204 Selaginella moellendorffii HOM05D036678 ORTHO05D011433 5.7e-09 67.8 230 26.5
CSS0042926 Camellia sinensis var. sinensis HOM05D000254 ORTHO05D000165 4.8e-08 64.7 154 28.6
Ciclev10007751m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.8e-07 62.8 289 20.1
Ciclev10023986m.g Citrus clementina HOM05D000254 ORTHO05D000165 1.8e-07 62.8 289 20.1
Lj6g0003945 Lotus japonicus HOM05D000254 ORTHO05D000165 2.4e-07 62.4 255 23.1
Oeu051221.1 Olea europaea HOM05D000254 ORTHO05D000165 2.4e-07 62.4 291 22.0
Lj6g0025209 Lotus japonicus HOM05D000254 ORTHO05D000165 3.1e-07 62.0 255 23.1
MD12G1128200 Malus domestica HOM05D000254 ORTHO05D000165 3.1e-07 62.0 201 25.4
SMO222G0008 Selaginella moellendorffii HOM05D011646 ORTHO05D012698 3.1e-07 62.0 197 22.8
SMO012G0034 Selaginella moellendorffii HOM05D036678 ORTHO05D011433 7.0e-07 60.8 278 22.3
SMO332G0008 Selaginella moellendorffii HOM05D011646 ORTHO05D012698 7.0e-07 60.8 262 22.1
TWI73G0830 Tripterygium wilfordii HOM05D000254 ORTHO05D000165 2.0e-06 59.3 172 27.3
PSO675G1195 Papaver somniferum HOM05D000254 ORTHO05D000165 7.7e-06 57.4 275 20.7


User provided reference genes

Program Settings