Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 1.8e-96 355.9 177 100.0
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 1.4e-16 90.5 98 44.9
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 1.8e-16 90.1 80 52.5
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 2.4e-16 89.7 89 46.1
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 2.4e-16 89.7 64 62.5
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 4.1e-16 89.0 64 59.4
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 5.3e-16 88.6 63 57.1
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 9.0e-16 87.8 79 53.2
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 9.0e-16 87.8 107 43.0
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 9.0e-16 87.8 63 57.1
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 2.0e-15 86.7 67 58.2
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 2.0e-15 86.7 64 57.8
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 2.6e-15 86.3 57 61.4
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 3.4e-15 85.9 90 41.1
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 3.4e-15 85.9 57 63.2
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 3.4e-15 85.9 59 61.0
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 5.8e-15 85.1 57 63.2
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 5.8e-15 85.1 126 41.3
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 5.8e-15 85.1 102 44.1
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 7.6e-15 84.7 57 57.9
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 7.6e-15 84.7 106 41.5
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 1.0e-14 84.3 64 56.2
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 1.0e-14 84.3 57 61.4
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.0e-14 84.3 57 61.4
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.0e-14 84.3 57 61.4
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.0e-14 84.3 57 61.4
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 1.3e-14 84.0 110 42.7
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 1.3e-14 84.0 89 42.7
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 1.3e-14 84.0 57 61.4
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 1.3e-14 84.0 61 57.4
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 1.3e-14 84.0 57 61.4
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 1.3e-14 84.0 57 61.4
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 1.7e-14 83.6 84 45.2
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 1.7e-14 83.6 69 53.6
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 2.2e-14 83.2 101 41.6
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 2.2e-14 83.2 57 59.6
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 2.2e-14 83.2 64 57.8
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 2.2e-14 83.2 64 59.4
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 2.9e-14 82.8 85 48.2
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 2.9e-14 82.8 57 59.6
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 2.9e-14 82.8 57 61.4
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 2.9e-14 82.8 57 59.6
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 2.9e-14 82.8 54 63.0
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 3.8e-14 82.4 54 63.0
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 3.8e-14 82.4 54 63.0
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 3.8e-14 82.4 54 63.0
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 3.8e-14 82.4 54 63.0
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 3.8e-14 82.4 54 63.0
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 3.8e-14 82.4 54 63.0
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 3.8e-14 82.4 64 57.8
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 3.8e-14 82.4 54 63.0
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 3.8e-14 82.4 64 57.8
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 3.8e-14 82.4 57 61.4
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 3.8e-14 82.4 57 59.6
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 3.8e-14 82.4 54 63.0
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 3.8e-14 82.4 57 61.4
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 5.0e-14 82.0 61 59.0
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 5.0e-14 82.0 56 58.9
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 5.0e-14 82.0 66 53.0
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 5.0e-14 82.0 104 43.3
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 5.0e-14 82.0 104 43.3
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 6.5e-14 81.6 54 63.0
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 6.5e-14 81.6 54 63.0
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 6.5e-14 81.6 124 39.5
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 8.4e-14 81.3 54 61.1
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 8.4e-14 81.3 79 45.6
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 8.4e-14 81.3 54 61.1
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 8.4e-14 81.3 60 56.7
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 8.4e-14 81.3 67 52.2
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 8.4e-14 81.3 69 53.6
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 8.4e-14 81.3 57 59.6
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 1.1e-13 80.9 54 61.1
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 1.1e-13 80.9 54 61.1
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 1.1e-13 80.9 54 59.3
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 1.4e-13 80.5 54 61.1
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 1.4e-13 80.5 114 38.6
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 1.4e-13 80.5 61 59.0
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.9e-13 80.1 65 52.3
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.9e-13 80.1 65 52.3
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 1.9e-13 80.1 57 59.6
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 1.9e-13 80.1 64 51.6
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 1.9e-13 80.1 61 55.7
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 2.5e-13 79.7 63 54.0
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 2.5e-13 79.7 54 61.1
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 2.5e-13 79.7 169 33.1
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 3.2e-13 79.3 108 39.8
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 3.2e-13 79.3 57 56.1
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 4.2e-13 79.0 60 55.0
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 4.2e-13 79.0 83 43.4
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 5.5e-13 78.6 113 39.8
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 2.7e-12 76.3 160 34.4
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 7.9e-12 74.7 134 35.1
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 1.0e-11 74.3 129 34.9
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.0e-11 74.3 134 35.1
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 3.9e-11 72.4 54 59.3
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 3.9e-11 72.4 127 35.4
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 8.7e-11 71.2 107 37.4
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 7.4e-10 68.2 78 39.7
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 1.3e-09 67.4 57 50.9
MCO09G231 Micromonas commoda HOM05D007514 ORTHO05D009469 1.7e-06 57.0 63 34.9


User provided reference genes

Program Settings